Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NKX6-1P78426 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NKX6-1P78426 OR10J6P-201ENST00000289731 930 ntBASIC4.79□□□□□ -1.64
NKX6-1P78426 AL121886.1-201ENST00000358609 435 ntBASIC4.79□□□□□ -1.64
NKX6-1P78426 RNA5SP326-201ENST00000363209 110 ntBASIC4.79□□□□□ -1.64
NKX6-1P78426 MIR551A-201ENST00000385042 96 ntBASIC4.79□□□□□ -1.64
NKX6-1P78426 AL009179.1-201ENST00000406085 265 ntBASIC4.79□□□□□ -1.64
NKX6-1P78426 RNU2-16P-201ENST00000410712 136 ntBASIC4.79□□□□□ -1.64
NKX6-1P78426 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.79□□□□□ -1.64
NKX6-1P78426 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.79□□□□□ -1.64
NKX6-1P78426 AC007161.1-204ENST00000423039 460 ntBASIC4.79□□□□□ -1.64
NKX6-1P78426 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.79□□□□□ -1.64
NKX6-1P78426 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.79□□□□□ -1.64
NKX6-1P78426 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NKX6-1P78426 MTND5P14-201ENST00000441481 1267 ntBASIC4.79□□□□□ -1.64
NKX6-1P78426 AL592447.1-201ENST00000447592 540 ntBASIC4.79□□□□□ -1.64
NKX6-1P78426 MTCO1P27-201ENST00000448269 226 ntBASIC4.79□□□□□ -1.64
NKX6-1P78426 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.79□□□□□ -1.64
NKX6-1P78426 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.79□□□□□ -1.64
NKX6-1P78426 CBX1P2-201ENST00000453841 458 ntBASIC4.79□□□□□ -1.64
NKX6-1P78426 USP9YP34-201ENST00000453983 808 ntBASIC4.79□□□□□ -1.64
NKX6-1P78426 PABPC1P3-201ENST00000469174 459 ntBASIC4.79□□□□□ -1.64
NKX6-1P78426 RPSAP51-201ENST00000497462 645 ntBASIC4.79□□□□□ -1.64
NKX6-1P78426 PRELID3BP7-201ENST00000503606 469 ntBASIC4.79□□□□□ -1.64
NKX6-1P78426 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.79□□□□□ -1.64
NKX6-1P78426 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.79□□□□□ -1.64
NKX6-1P78426 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.79□□□□□ -1.64
NKX6-1P78426 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.79□□□□□ -1.64
NKX6-1P78426 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC4.79□□□□□ -1.64
NKX6-1P78426 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
NKX6-1P78426 AC092470.1-201ENST00000546187 132 ntBASIC4.79□□□□□ -1.64
NKX6-1P78426 OR6C73P-201ENST00000546432 358 ntBASIC4.79□□□□□ -1.64
NKX6-1P78426 CR383656.6-201ENST00000550518 394 ntBASIC4.79□□□□□ -1.64
NKX6-1P78426 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC4.79□□□□□ -1.64
NKX6-1P78426 AC084757.1-201ENST00000559987 490 ntBASIC4.79□□□□□ -1.64
NKX6-1P78426 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NKX6-1P78426 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC4.79□□□□□ -1.64
NKX6-1P78426 MIR4436B2-201ENST00000581415 91 ntBASIC4.79□□□□□ -1.64
NKX6-1P78426 MIR4436B1-201ENST00000583272 91 ntBASIC4.79□□□□□ -1.64
NKX6-1P78426 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.79□□□□□ -1.64
NKX6-1P78426 RPL23AP92-201ENST00000603609 255 ntBASIC4.79□□□□□ -1.64
NKX6-1P78426 AC007566.2-201ENST00000603642 413 ntBASIC4.79□□□□□ -1.64
NKX6-1P78426 AL513477.2-201ENST00000607858 568 ntBASIC4.79□□□□□ -1.64
NKX6-1P78426 AC097468.3-201ENST00000607956 456 ntBASIC4.79□□□□□ -1.64
NKX6-1P78426 AC133644.2-201ENST00000608142 540 ntBASIC4.79□□□□□ -1.64
NKX6-1P78426 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.79□□□□□ -1.64
NKX6-1P78426 AL118522.2-201ENST00000616045 615 ntBASIC4.79□□□□□ -1.64
NKX6-1P78426 AC009509.4-201ENST00000619202 509 ntBASIC4.79□□□□□ -1.64
NKX6-1P78426 AC000123.2-201ENST00000623124 461 ntBASIC4.79□□□□□ -1.64
NKX6-1P78426 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.79□□□□□ -1.64
NKX6-1P78426 AC093591.3-201ENST00000634516 308 ntBASIC4.79□□□□□ -1.64
NKX6-1P78426 AC097504.1-201ENST00000515103 2415 ntBASIC4.79□□□□□ -1.64
NKX6-1P78426 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NKX6-1P78426 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
NKX6-1P78426 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
NKX6-1P78426 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.79□□□□□ -1.64
NKX6-1P78426 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NKX6-1P78426 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NKX6-1P78426 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.78□□□□□ -1.64
NKX6-1P78426 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
NKX6-1P78426 MUC2-202ENST00000613187 4845 ntBASIC4.78□□□□□ -1.64
NKX6-1P78426 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
NKX6-1P78426 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.78□□□□□ -1.64
NKX6-1P78426 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NKX6-1P78426 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
NKX6-1P78426 HSPA8P18-201ENST00000439846 1928 ntBASIC4.78□□□□□ -1.64
NKX6-1P78426 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NKX6-1P78426 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NKX6-1P78426 RNU1-130P-201ENST00000363930 160 ntBASIC4.78□□□□□ -1.64
NKX6-1P78426 RNU6-289P-201ENST00000364093 107 ntBASIC4.78□□□□□ -1.64
NKX6-1P78426 RN7SKP6-201ENST00000364795 319 ntBASIC4.78□□□□□ -1.64
NKX6-1P78426 RNU6-1042P-201ENST00000384204 107 ntBASIC4.78□□□□□ -1.64
NKX6-1P78426 RNU6-1119P-201ENST00000384349 108 ntBASIC4.78□□□□□ -1.64
NKX6-1P78426 DHFRP6-201ENST00000401776 268 ntBASIC4.78□□□□□ -1.64
NKX6-1P78426 MIR1305-201ENST00000408300 86 ntBASIC4.78□□□□□ -1.64
NKX6-1P78426 RN7SKP266-201ENST00000410232 287 ntBASIC4.78□□□□□ -1.64
NKX6-1P78426 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.78□□□□□ -1.64
NKX6-1P78426 RPL21P108-201ENST00000413857 481 ntBASIC4.78□□□□□ -1.64
NKX6-1P78426 AL133482.1-201ENST00000415988 498 ntBASIC4.78□□□□□ -1.64
NKX6-1P78426 RPL21P32-201ENST00000419877 477 ntBASIC4.78□□□□□ -1.64
NKX6-1P78426 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
NKX6-1P78426 AC008065.1-201ENST00000428525 348 ntBASIC4.78□□□□□ -1.64
NKX6-1P78426 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.78□□□□□ -1.64
NKX6-1P78426 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.78□□□□□ -1.64
NKX6-1P78426 LSM1P1-201ENST00000438629 273 ntBASIC4.78□□□□□ -1.64
NKX6-1P78426 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.78□□□□□ -1.64
NKX6-1P78426 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.78□□□□□ -1.64
NKX6-1P78426 HSPE1P28-201ENST00000443139 211 ntBASIC4.78□□□□□ -1.64
NKX6-1P78426 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.78□□□□□ -1.64
NKX6-1P78426 AC073850.1-201ENST00000449243 255 ntBASIC4.78□□□□□ -1.64
NKX6-1P78426 AL591623.2-201ENST00000449978 222 ntBASIC4.78□□□□□ -1.64
NKX6-1P78426 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.78□□□□□ -1.64
NKX6-1P78426 SNORD125-201ENST00000459538 96 ntBASIC4.78□□□□□ -1.64
NKX6-1P78426 PLGLA-201ENST00000465668 449 ntBASIC4.78□□□□□ -1.64
NKX6-1P78426 RPS17P5-201ENST00000498293 408 ntBASIC4.78□□□□□ -1.64
NKX6-1P78426 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.78□□□□□ -1.64
NKX6-1P78426 AC093767.1-201ENST00000504523 156 ntBASIC4.78□□□□□ -1.64
NKX6-1P78426 ARL2BPP4-201ENST00000506854 471 ntBASIC4.78□□□□□ -1.64
NKX6-1P78426 AC109458.1-201ENST00000508858 316 ntBASIC4.78□□□□□ -1.64
NKX6-1P78426 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms