Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDH12P55289 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDH12P55289 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDH12P55289 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDH12P55289 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.31□□□□□ -1.72
CDH12P55289 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CDH12P55289 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.31□□□□□ -1.72
CDH12P55289 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CDH12P55289 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.31□□□□□ -1.72
CDH12P55289 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDH12P55289 MTND4P34-201ENST00000572715 1371 ntBASIC4.31□□□□□ -1.72
CDH12P55289 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CDH12P55289 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.31□□□□□ -1.72
CDH12P55289 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDH12P55289 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CDH12P55289 AC016716.1-201ENST00000265882 708 ntBASIC4.31□□□□□ -1.72
CDH12P55289 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CDH12P55289 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
CDH12P55289 RNU6-492P-201ENST00000363035 104 ntBASIC4.31□□□□□ -1.72
CDH12P55289 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDH12P55289 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDH12P55289 RNA5SP146-201ENST00000410743 123 ntBASIC4.31□□□□□ -1.72
CDH12P55289 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.31□□□□□ -1.72
CDH12P55289 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.31□□□□□ -1.72
CDH12P55289 PDSS1P1-201ENST00000422953 1114 ntBASIC4.31□□□□□ -1.72
CDH12P55289 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CDH12P55289 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.31□□□□□ -1.72
CDH12P55289 AL513175.1-201ENST00000431492 780 ntBASIC4.31□□□□□ -1.72
CDH12P55289 RPS25P9-201ENST00000435591 252 ntBASIC4.31□□□□□ -1.72
CDH12P55289 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC4.31□□□□□ -1.72
CDH12P55289 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC4.31□□□□□ -1.72
CDH12P55289 RPS15AP1-201ENST00000457423 391 ntBASIC4.31□□□□□ -1.72
CDH12P55289 MTND2P28-201ENST00000457540 1044 ntBASIC4.31□□□□□ -1.72
CDH12P55289 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.31□□□□□ -1.72
CDH12P55289 RPL21P71-201ENST00000465598 459 ntBASIC4.31□□□□□ -1.72
CDH12P55289 RPL23AP65-201ENST00000475608 468 ntBASIC4.31□□□□□ -1.72
CDH12P55289 RPL30P6-201ENST00000475925 342 ntBASIC4.31□□□□□ -1.72
CDH12P55289 RAP1BP2-201ENST00000478270 544 ntBASIC4.31□□□□□ -1.72
CDH12P55289 RN7SL629P-201ENST00000489622 285 ntBASIC4.31□□□□□ -1.72
CDH12P55289 AC112198.1-201ENST00000505369 1220 ntBASIC4.31□□□□□ -1.72
CDH12P55289 STMN1P2-201ENST00000508435 439 ntBASIC4.31□□□□□ -1.72
CDH12P55289 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CDH12P55289 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.31□□□□□ -1.72
CDH12P55289 RNU6-202P-201ENST00000515998 96 ntBASIC4.31□□□□□ -1.72
CDH12P55289 RNU1-6P-201ENST00000516290 144 ntBASIC4.31□□□□□ -1.72
CDH12P55289 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.31□□□□□ -1.72
CDH12P55289 AC022882.1-201ENST00000532142 501 ntBASIC4.31□□□□□ -1.72
CDH12P55289 AC008033.2-201ENST00000542626 177 ntBASIC4.31□□□□□ -1.72
CDH12P55289 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CDH12P55289 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.31□□□□□ -1.72
CDH12P55289 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.31□□□□□ -1.72
CDH12P55289 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.31□□□□□ -1.72
CDH12P55289 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.31□□□□□ -1.72
CDH12P55289 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.31□□□□□ -1.72
CDH12P55289 DUXAP11-201ENST00000603858 526 ntBASIC4.31□□□□□ -1.72
CDH12P55289 AC008966.2-201ENST00000606157 453 ntBASIC4.31□□□□□ -1.72
CDH12P55289 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.31□□□□□ -1.72
CDH12P55289 AL354760.1-201ENST00000608357 643 ntBASIC4.31□□□□□ -1.72
CDH12P55289 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.31□□□□□ -1.72
CDH12P55289 AC005332.6-201ENST00000613178 446 ntBASIC4.31□□□□□ -1.72
CDH12P55289 AC011939.3-201ENST00000613686 466 ntBASIC4.31□□□□□ -1.72
CDH12P55289 AC008083.4-201ENST00000615076 444 ntBASIC4.31□□□□□ -1.72
CDH12P55289 AL136981.2-201ENST00000617319 734 ntBASIC4.31□□□□□ -1.72
CDH12P55289 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.31□□□□□ -1.72
CDH12P55289 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDH12P55289 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.31□□□□□ -1.72
CDH12P55289 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDH12P55289 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.3□□□□□ -1.72
CDH12P55289 DBF4P1-201ENST00000412976 1892 ntBASIC4.3□□□□□ -1.72
CDH12P55289 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.3□□□□□ -1.72
CDH12P55289 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDH12P55289 INTS6P1-201ENST00000504674 2530 ntBASIC4.3□□□□□ -1.72
CDH12P55289 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CDH12P55289 RNA5SP507-201ENST00000363603 121 ntBASIC4.3□□□□□ -1.72
CDH12P55289 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CDH12P55289 Y_RNA.436-201ENST00000384097 102 ntBASIC4.3□□□□□ -1.72
CDH12P55289 Y_RNA.560-201ENST00000384689 102 ntBASIC4.3□□□□□ -1.72
CDH12P55289 RNU4-34P-201ENST00000410431 124 ntBASIC4.3□□□□□ -1.72
CDH12P55289 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDH12P55289 AC092634.6-201ENST00000418558 192 ntBASIC4.3□□□□□ -1.72
CDH12P55289 OR2B7P-201ENST00000429302 934 ntBASIC4.3□□□□□ -1.72
CDH12P55289 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.3□□□□□ -1.72
CDH12P55289 RPL23AP15-201ENST00000450202 459 ntBASIC4.3□□□□□ -1.72
CDH12P55289 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.3□□□□□ -1.72
CDH12P55289 RPL10P17-201ENST00000453852 316 ntBASIC4.3□□□□□ -1.72
CDH12P55289 AC079168.2-201ENST00000453977 416 ntBASIC4.3□□□□□ -1.72
CDH12P55289 RPS5P7-201ENST00000456664 608 ntBASIC4.3□□□□□ -1.72
CDH12P55289 AC090142.1-201ENST00000465776 462 ntBASIC4.3□□□□□ -1.72
CDH12P55289 AC022795.1-201ENST00000473808 480 ntBASIC4.3□□□□□ -1.72
CDH12P55289 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.3□□□□□ -1.72
CDH12P55289 AC025164.1-201ENST00000496249 478 ntBASIC4.3□□□□□ -1.72
CDH12P55289 SETP14-201ENST00000497538 873 ntBASIC4.3□□□□□ -1.72
CDH12P55289 AC025674.1-201ENST00000507074 324 ntBASIC4.3□□□□□ -1.72
CDH12P55289 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.3□□□□□ -1.72
CDH12P55289 AC005178.1-201ENST00000508392 440 ntBASIC4.3□□□□□ -1.72
CDH12P55289 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.3□□□□□ -1.72
CDH12P55289 AC011411.1-201ENST00000509592 876 ntBASIC4.3□□□□□ -1.72
CDH12P55289 AC110775.1-201ENST00000513721 462 ntBASIC4.3□□□□□ -1.72
CDH12P55289 RNA5SP446-201ENST00000515955 82 ntBASIC4.3□□□□□ -1.72
CDH12P55289 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms