Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.05□□□□□ -1.76
TNFRSF4P43489 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.05□□□□□ -1.76
TNFRSF4P43489 RAB9AP1-201ENST00000449393 573 ntBASIC4.05□□□□□ -1.76
TNFRSF4P43489 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TNFRSF4P43489 ACTR3P3-201ENST00000480448 893 ntBASIC4.05□□□□□ -1.76
TNFRSF4P43489 AC008494.2-201ENST00000514544 370 ntBASIC4.05□□□□□ -1.76
TNFRSF4P43489 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.05□□□□□ -1.76
TNFRSF4P43489 NDUFA5P2-201ENST00000519723 344 ntBASIC4.05□□□□□ -1.76
TNFRSF4P43489 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.05□□□□□ -1.76
TNFRSF4P43489 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.05□□□□□ -1.76
TNFRSF4P43489 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.05□□□□□ -1.76
TNFRSF4P43489 YPEL5P3-201ENST00000547227 352 ntBASIC4.05□□□□□ -1.76
TNFRSF4P43489 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.05□□□□□ -1.76
TNFRSF4P43489 CR383656.14-201ENST00000551951 406 ntBASIC4.05□□□□□ -1.76
TNFRSF4P43489 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.05□□□□□ -1.76
TNFRSF4P43489 MIR4458-201ENST00000578872 75 ntBASIC4.05□□□□□ -1.76
TNFRSF4P43489 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.05□□□□□ -1.76
TNFRSF4P43489 AC015726.1-201ENST00000602353 681 ntBASIC4.05□□□□□ -1.76
TNFRSF4P43489 AC024220.1-201ENST00000603675 484 ntBASIC4.05□□□□□ -1.76
TNFRSF4P43489 MIR432-201ENST00000606207 94 ntBASIC4.05□□□□□ -1.76
TNFRSF4P43489 SNORA51-201ENST00000606420 132 ntBASIC4.05□□□□□ -1.76
TNFRSF4P43489 AC064801.1-201ENST00000612025 407 ntBASIC4.05□□□□□ -1.76
TNFRSF4P43489 AL669942.2-201ENST00000620352 697 ntBASIC4.05□□□□□ -1.76
TNFRSF4P43489 AL139089.1-201ENST00000620372 975 ntBASIC4.05□□□□□ -1.76
TNFRSF4P43489 AL138960.2-201ENST00000625145 535 ntBASIC4.05□□□□□ -1.76
TNFRSF4P43489 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TNFRSF4P43489 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.05□□□□□ -1.76
TNFRSF4P43489 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TNFRSF4P43489 AC074029.4-201ENST00000624796 1859 ntBASIC4.05□□□□□ -1.76
TNFRSF4P43489 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TNFRSF4P43489 AP002001.2-201ENST00000529025 1469 ntBASIC4.05□□□□□ -1.76
TNFRSF4P43489 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
TNFRSF4P43489 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TNFRSF4P43489 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
TNFRSF4P43489 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
TNFRSF4P43489 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TNFRSF4P43489 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
TNFRSF4P43489 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TNFRSF4P43489 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
TNFRSF4P43489 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TNFRSF4P43489 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.04□□□□□ -1.76
TNFRSF4P43489 ZNF602P-201ENST00000405929 924 ntBASIC4.04□□□□□ -1.76
TNFRSF4P43489 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.04□□□□□ -1.76
TNFRSF4P43489 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TNFRSF4P43489 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.04□□□□□ -1.76
TNFRSF4P43489 Z97055.1-201ENST00000419730 712 ntBASIC4.04□□□□□ -1.76
TNFRSF4P43489 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.04□□□□□ -1.76
TNFRSF4P43489 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.04□□□□□ -1.76
TNFRSF4P43489 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC4.04□□□□□ -1.76
TNFRSF4P43489 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.04□□□□□ -1.76
TNFRSF4P43489 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.04□□□□□ -1.76
TNFRSF4P43489 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC4.04□□□□□ -1.76
TNFRSF4P43489 MTND2P39-201ENST00000457230 764 ntBASIC4.04□□□□□ -1.76
TNFRSF4P43489 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.04□□□□□ -1.76
TNFRSF4P43489 MTATP6P22-201ENST00000507369 598 ntBASIC4.04□□□□□ -1.76
TNFRSF4P43489 RN7SKP82-201ENST00000516786 223 ntBASIC4.04□□□□□ -1.76
TNFRSF4P43489 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.04□□□□□ -1.76
TNFRSF4P43489 AL161713.1-201ENST00000555538 145 ntBASIC4.04□□□□□ -1.76
TNFRSF4P43489 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC4.04□□□□□ -1.76
TNFRSF4P43489 AC095057.3-201ENST00000567102 1157 ntBASIC4.04□□□□□ -1.76
TNFRSF4P43489 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.04□□□□□ -1.76
TNFRSF4P43489 MTATP6P2-201ENST00000603319 678 ntBASIC4.04□□□□□ -1.76
TNFRSF4P43489 AL392112.1-201ENST00000605115 829 ntBASIC4.04□□□□□ -1.76
TNFRSF4P43489 AC120053.1-201ENST00000607706 736 ntBASIC4.04□□□□□ -1.76
TNFRSF4P43489 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.04□□□□□ -1.76
TNFRSF4P43489 AC112503.2-201ENST00000609005 552 ntBASIC4.04□□□□□ -1.76
TNFRSF4P43489 AC026368.1-201ENST00000614934 690 ntBASIC4.04□□□□□ -1.76
TNFRSF4P43489 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TNFRSF4P43489 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TNFRSF4P43489 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
TNFRSF4P43489 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.04□□□□□ -1.76
TNFRSF4P43489 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TNFRSF4P43489 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TNFRSF4P43489 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TNFRSF4P43489 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.04□□□□□ -1.76
TNFRSF4P43489 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
TNFRSF4P43489 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TNFRSF4P43489 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
TNFRSF4P43489 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
TNFRSF4P43489 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TNFRSF4P43489 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
TNFRSF4P43489 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TNFRSF4P43489 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
TNFRSF4P43489 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.03□□□□□ -1.76
TNFRSF4P43489 SNORA71.3-201ENST00000362582 128 ntBASIC4.03□□□□□ -1.76
TNFRSF4P43489 RNA5SP391-201ENST00000363456 119 ntBASIC4.03□□□□□ -1.76
TNFRSF4P43489 SNORA51.12-201ENST00000384448 134 ntBASIC4.03□□□□□ -1.76
TNFRSF4P43489 MIR525-201ENST00000384978 85 ntBASIC4.03□□□□□ -1.76
TNFRSF4P43489 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.03□□□□□ -1.76
TNFRSF4P43489 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.03□□□□□ -1.76
TNFRSF4P43489 AC114814.2-201ENST00000419195 485 ntBASIC4.03□□□□□ -1.76
TNFRSF4P43489 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.03□□□□□ -1.76
TNFRSF4P43489 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.03□□□□□ -1.76
TNFRSF4P43489 HIGD1AP4-201ENST00000430194 280 ntBASIC4.03□□□□□ -1.76
TNFRSF4P43489 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.03□□□□□ -1.76
TNFRSF4P43489 FABP5P3-201ENST00000437960 408 ntBASIC4.03□□□□□ -1.76
TNFRSF4P43489 UBE2V1P5-201ENST00000440070 405 ntBASIC4.03□□□□□ -1.76
TNFRSF4P43489 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.03□□□□□ -1.76
TNFRSF4P43489 AC009263.1-201ENST00000441193 1239 ntBASIC4.03□□□□□ -1.76
TNFRSF4P43489 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 223.6 ms