Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AC105074.1-201ENST00000623380 3095 ntBASIC4.27□□□□□ -1.73
HNF4AP41235 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HNF4AP41235 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HNF4AP41235 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
HNF4AP41235 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
HNF4AP41235 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HNF4AP41235 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.26□□□□□ -1.73
HNF4AP41235 SEPT7P7-201ENST00000420492 1301 ntBASIC4.26□□□□□ -1.73
HNF4AP41235 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HNF4AP41235 AC068254.2-201ENST00000623938 3577 ntBASIC4.26□□□□□ -1.73
HNF4AP41235 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.26□□□□□ -1.73
HNF4AP41235 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
HNF4AP41235 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HNF4AP41235 OR56B2P-202ENST00000641377 2453 ntBASIC4.26□□□□□ -1.73
HNF4AP41235 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
HNF4AP41235 FABP12P1-201ENST00000401911 322 ntBASIC4.26□□□□□ -1.73
HNF4AP41235 AC073264.1-201ENST00000411508 416 ntBASIC4.26□□□□□ -1.73
HNF4AP41235 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.26□□□□□ -1.73
HNF4AP41235 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HNF4AP41235 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.26□□□□□ -1.73
HNF4AP41235 AL132765.1-201ENST00000434165 553 ntBASIC4.26□□□□□ -1.73
HNF4AP41235 UBE2V1P3-201ENST00000439651 417 ntBASIC4.26□□□□□ -1.73
HNF4AP41235 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC4.26□□□□□ -1.73
HNF4AP41235 CEACAMP9-201ENST00000442990 513 ntBASIC4.26□□□□□ -1.73
HNF4AP41235 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.26□□□□□ -1.73
HNF4AP41235 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.26□□□□□ -1.73
HNF4AP41235 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.26□□□□□ -1.73
HNF4AP41235 AC008379.1-201ENST00000463655 464 ntBASIC4.26□□□□□ -1.73
HNF4AP41235 AC053481.1-201ENST00000467217 306 ntBASIC4.26□□□□□ -1.73
HNF4AP41235 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.26□□□□□ -1.73
HNF4AP41235 RNF138P1-201ENST00000502765 546 ntBASIC4.26□□□□□ -1.73
HNF4AP41235 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC4.26□□□□□ -1.73
HNF4AP41235 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.26□□□□□ -1.73
HNF4AP41235 AC121161.1-201ENST00000510606 652 ntBASIC4.26□□□□□ -1.73
HNF4AP41235 PPBPP1-201ENST00000510807 373 ntBASIC4.26□□□□□ -1.73
HNF4AP41235 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.26□□□□□ -1.73
HNF4AP41235 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.26□□□□□ -1.73
HNF4AP41235 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.26□□□□□ -1.73
HNF4AP41235 AP004242.1-201ENST00000533701 349 ntBASIC4.26□□□□□ -1.73
HNF4AP41235 TOMM20P2-201ENST00000540082 421 ntBASIC4.26□□□□□ -1.73
HNF4AP41235 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.26□□□□□ -1.73
HNF4AP41235 CR383656.6-201ENST00000550518 394 ntBASIC4.26□□□□□ -1.73
HNF4AP41235 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.26□□□□□ -1.73
HNF4AP41235 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.26□□□□□ -1.73
HNF4AP41235 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.26□□□□□ -1.73
HNF4AP41235 AC090616.5-202ENST00000582111 297 ntBASIC4.26□□□□□ -1.73
HNF4AP41235 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.26□□□□□ -1.73
HNF4AP41235 AP001160.4-201ENST00000596971 382 ntBASIC4.26□□□□□ -1.73
HNF4AP41235 AC091057.3-201ENST00000602684 733 ntBASIC4.26□□□□□ -1.73
HNF4AP41235 AC008782.1-201ENST00000603386 430 ntBASIC4.26□□□□□ -1.73
HNF4AP41235 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.26□□□□□ -1.73
HNF4AP41235 AC026741.1-201ENST00000605892 482 ntBASIC4.26□□□□□ -1.73
HNF4AP41235 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.26□□□□□ -1.73
HNF4AP41235 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HNF4AP41235 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.26□□□□□ -1.73
HNF4AP41235 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
HNF4AP41235 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
HNF4AP41235 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HNF4AP41235 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
HNF4AP41235 MARK2P15-201ENST00000432204 2186 ntBASIC4.26□□□□□ -1.73
HNF4AP41235 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
HNF4AP41235 AL592148.3-201ENST00000608771 2646 ntBASIC4.25□□□□□ -1.73
HNF4AP41235 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.25□□□□□ -1.73
HNF4AP41235 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.25□□□□□ -1.73
HNF4AP41235 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HNF4AP41235 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HNF4AP41235 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HNF4AP41235 MIR93-201ENST00000385024 80 ntBASIC4.25□□□□□ -1.73
HNF4AP41235 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
HNF4AP41235 RPS3AP23-201ENST00000401762 784 ntBASIC4.25□□□□□ -1.73
HNF4AP41235 AL024507.1-201ENST00000412741 274 ntBASIC4.25□□□□□ -1.73
HNF4AP41235 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.25□□□□□ -1.73
HNF4AP41235 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.25□□□□□ -1.73
HNF4AP41235 BX664727.1-201ENST00000416024 466 ntBASIC4.25□□□□□ -1.73
HNF4AP41235 MTCYBP24-201ENST00000420387 1106 ntBASIC4.25□□□□□ -1.73
HNF4AP41235 MTCO2P17-201ENST00000424336 677 ntBASIC4.25□□□□□ -1.73
HNF4AP41235 AC005517.2-201ENST00000424673 553 ntBASIC4.25□□□□□ -1.73
HNF4AP41235 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.25□□□□□ -1.73
HNF4AP41235 AC010881.1-201ENST00000433830 235 ntBASIC4.25□□□□□ -1.73
HNF4AP41235 HMGB1P45-201ENST00000435986 653 ntBASIC4.25□□□□□ -1.73
HNF4AP41235 AL138799.3-201ENST00000438968 350 ntBASIC4.25□□□□□ -1.73
HNF4AP41235 RAB11AP1-201ENST00000442978 646 ntBASIC4.25□□□□□ -1.73
HNF4AP41235 AL096829.2-201ENST00000446582 742 ntBASIC4.25□□□□□ -1.73
HNF4AP41235 AC005002.1-201ENST00000447458 540 ntBASIC4.25□□□□□ -1.73
HNF4AP41235 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HNF4AP41235 snoU13.1-201ENST00000459157 104 ntBASIC4.25□□□□□ -1.73
HNF4AP41235 TPT1P3-201ENST00000492841 512 ntBASIC4.25□□□□□ -1.73
HNF4AP41235 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.25□□□□□ -1.73
HNF4AP41235 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HNF4AP41235 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HNF4AP41235 AC015795.1-201ENST00000513669 327 ntBASIC4.25□□□□□ -1.73
HNF4AP41235 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.25□□□□□ -1.73
HNF4AP41235 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
HNF4AP41235 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
HNF4AP41235 YWHAZP1-201ENST00000556286 722 ntBASIC4.25□□□□□ -1.73
HNF4AP41235 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.25□□□□□ -1.73
HNF4AP41235 AC090666.1-201ENST00000578241 445 ntBASIC4.25□□□□□ -1.73
HNF4AP41235 MIR4715-201ENST00000584117 79 ntBASIC4.25□□□□□ -1.73
HNF4AP41235 AC010928.3-201ENST00000587712 541 ntBASIC4.25□□□□□ -1.73
HNF4AP41235 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms