Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.95□□□□□ -1.78
SOX3P41225 AC113420.1-201ENST00000507903 571 ntBASIC3.95□□□□□ -1.78
SOX3P41225 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.95□□□□□ -1.78
SOX3P41225 AP003730.1-201ENST00000524605 285 ntBASIC3.95□□□□□ -1.78
SOX3P41225 PHBP17-201ENST00000528576 541 ntBASIC3.95□□□□□ -1.78
SOX3P41225 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SOX3P41225 MTND1P24-201ENST00000552175 861 ntBASIC3.95□□□□□ -1.78
SOX3P41225 AL132857.1-201ENST00000555180 708 ntBASIC3.95□□□□□ -1.78
SOX3P41225 AC090312.2-201ENST00000582687 378 ntBASIC3.95□□□□□ -1.78
SOX3P41225 AC009948.4-201ENST00000604692 675 ntBASIC3.95□□□□□ -1.78
SOX3P41225 VN1R74P-201ENST00000613259 503 ntBASIC3.95□□□□□ -1.78
SOX3P41225 VN1R7P-201ENST00000619242 903 ntBASIC3.95□□□□□ -1.78
SOX3P41225 AL023881.1-201ENST00000621088 301 ntBASIC3.95□□□□□ -1.78
SOX3P41225 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.95□□□□□ -1.78
SOX3P41225 AC008993.2-201ENST00000631744 806 ntBASIC3.95□□□□□ -1.78
SOX3P41225 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.95□□□□□ -1.78
SOX3P41225 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.95□□□□□ -1.78
SOX3P41225 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
SOX3P41225 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
SOX3P41225 AL445437.1-201ENST00000623157 3087 ntBASIC3.95□□□□□ -1.78
SOX3P41225 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.95□□□□□ -1.78
SOX3P41225 AC022031.1-201ENST00000585985 2593 ntBASIC3.95□□□□□ -1.78
SOX3P41225 AP000756.2-201ENST00000624168 2567 ntBASIC3.95□□□□□ -1.78
SOX3P41225 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SOX3P41225 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC3.95□□□□□ -1.78
SOX3P41225 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SOX3P41225 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.94□□□□□ -1.78
SOX3P41225 AL450326.2-201ENST00000421913 1962 ntBASIC3.94□□□□□ -1.78
SOX3P41225 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.94□□□□□ -1.78
SOX3P41225 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.94□□□□□ -1.78
SOX3P41225 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
SOX3P41225 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SOX3P41225 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.94□□□□□ -1.78
SOX3P41225 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SOX3P41225 LARP1BP1-201ENST00000506036 1359 ntBASIC3.94□□□□□ -1.78
SOX3P41225 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
SOX3P41225 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
SOX3P41225 OR52E6-202ENST00000379946 954 ntBASIC3.94□□□□□ -1.78
SOX3P41225 AC093719.1-202ENST00000392735 373 ntBASIC3.94□□□□□ -1.78
SOX3P41225 RNA5SP306-201ENST00000411087 107 ntBASIC3.94□□□□□ -1.78
SOX3P41225 BTF3P8-201ENST00000414577 526 ntBASIC3.94□□□□□ -1.78
SOX3P41225 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.94□□□□□ -1.78
SOX3P41225 AC009302.1-201ENST00000417147 390 ntBASIC3.94□□□□□ -1.78
SOX3P41225 AL449283.1-202ENST00000418249 604 ntBASIC3.94□□□□□ -1.78
SOX3P41225 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.94□□□□□ -1.78
SOX3P41225 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.94□□□□□ -1.78
SOX3P41225 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.94□□□□□ -1.78
SOX3P41225 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.94□□□□□ -1.78
SOX3P41225 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.94□□□□□ -1.78
SOX3P41225 RPL21P133-201ENST00000443666 476 ntBASIC3.94□□□□□ -1.78
SOX3P41225 BX248409.1-201ENST00000455497 255 ntBASIC3.94□□□□□ -1.78
SOX3P41225 AC091959.2-201ENST00000477363 321 ntBASIC3.94□□□□□ -1.78
SOX3P41225 AC068587.1-201ENST00000483613 781 ntBASIC3.94□□□□□ -1.78
SOX3P41225 AC079203.1-201ENST00000487972 404 ntBASIC3.94□□□□□ -1.78
SOX3P41225 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.94□□□□□ -1.78
SOX3P41225 RPL21P131-201ENST00000497298 483 ntBASIC3.94□□□□□ -1.78
SOX3P41225 AC025554.1-201ENST00000505641 188 ntBASIC3.94□□□□□ -1.78
SOX3P41225 AL592156.1-201ENST00000508758 304 ntBASIC3.94□□□□□ -1.78
SOX3P41225 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.94□□□□□ -1.78
SOX3P41225 AC008562.1-201ENST00000521763 330 ntBASIC3.94□□□□□ -1.78
SOX3P41225 OR10V3P-201ENST00000525712 725 ntBASIC3.94□□□□□ -1.78
SOX3P41225 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.94□□□□□ -1.78
SOX3P41225 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.94□□□□□ -1.78
SOX3P41225 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.94□□□□□ -1.78
SOX3P41225 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.94□□□□□ -1.78
SOX3P41225 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SOX3P41225 NTAN1P1-201ENST00000603150 646 ntBASIC3.94□□□□□ -1.78
SOX3P41225 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC3.94□□□□□ -1.78
SOX3P41225 RNU4-5P-201ENST00000607255 135 ntBASIC3.94□□□□□ -1.78
SOX3P41225 AL355816.1-201ENST00000607951 118 ntBASIC3.94□□□□□ -1.78
SOX3P41225 AC023043.4-201ENST00000612081 449 ntBASIC3.94□□□□□ -1.78
SOX3P41225 PART1_2.1-201ENST00000612397 250 ntBASIC3.94□□□□□ -1.78
SOX3P41225 AC116447.1-201ENST00000613153 453 ntBASIC3.94□□□□□ -1.78
SOX3P41225 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SOX3P41225 AC123767.1-202ENST00000620407 817 ntBASIC3.94□□□□□ -1.78
SOX3P41225 AC116563.2-201ENST00000624751 535 ntBASIC3.94□□□□□ -1.78
SOX3P41225 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC3.94□□□□□ -1.78
SOX3P41225 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.94□□□□□ -1.78
SOX3P41225 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.94□□□□□ -1.78
SOX3P41225 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SOX3P41225 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
SOX3P41225 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.94□□□□□ -1.78
SOX3P41225 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SOX3P41225 AC046144.1-201ENST00000478559 1853 ntBASIC3.94□□□□□ -1.78
SOX3P41225 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SOX3P41225 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SOX3P41225 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
SOX3P41225 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
SOX3P41225 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SOX3P41225 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
SOX3P41225 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.93□□□□□ -1.78
SOX3P41225 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SOX3P41225 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SOX3P41225 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SOX3P41225 AL121657.1-201ENST00000327215 531 ntBASIC3.93□□□□□ -1.78
SOX3P41225 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.93□□□□□ -1.78
SOX3P41225 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SOX3P41225 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SOX3P41225 SNORA70C-201ENST00000384538 135 ntBASIC3.93□□□□□ -1.78
SOX3P41225 RPS26P8-201ENST00000393490 348 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms