Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SLC6A4P31645 SLC2A13P1-201ENST00000531560 322 ntBASIC5.05□□□□□ -1.6
SLC6A4P31645 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.05□□□□□ -1.6
SLC6A4P31645 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC5.05□□□□□ -1.6
SLC6A4P31645 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SLC6A4P31645 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC5.05□□□□□ -1.6
SLC6A4P31645 TRAV15-201ENST00000556680 249 ntBASIC5.05□□□□□ -1.6
SLC6A4P31645 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.05□□□□□ -1.6
SLC6A4P31645 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.05□□□□□ -1.6
SLC6A4P31645 AC020914.6-201ENST00000594327 272 ntBASIC5.05□□□□□ -1.6
SLC6A4P31645 AL354760.1-201ENST00000608357 643 ntBASIC5.05□□□□□ -1.6
SLC6A4P31645 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.05□□□□□ -1.6
SLC6A4P31645 AL731566.2-201ENST00000618971 317 ntBASIC5.05□□□□□ -1.6
SLC6A4P31645 AC009509.4-201ENST00000619202 509 ntBASIC5.05□□□□□ -1.6
SLC6A4P31645 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
SLC6A4P31645 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SLC6A4P31645 AC134882.1-201ENST00000603738 1676 ntBASIC5.05□□□□□ -1.6
SLC6A4P31645 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.05□□□□□ -1.6
SLC6A4P31645 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SLC6A4P31645 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SLC6A4P31645 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SLC6A4P31645 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
SLC6A4P31645 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SLC6A4P31645 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SLC6A4P31645 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SLC6A4P31645 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
SLC6A4P31645 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
SLC6A4P31645 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
SLC6A4P31645 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.04□□□□□ -1.6
SLC6A4P31645 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SLC6A4P31645 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.04□□□□□ -1.6
SLC6A4P31645 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SLC6A4P31645 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.04□□□□□ -1.6
SLC6A4P31645 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SLC6A4P31645 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SLC6A4P31645 AL078595.1-201ENST00000404458 226 ntBASIC5.04□□□□□ -1.6
SLC6A4P31645 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.04□□□□□ -1.6
SLC6A4P31645 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC5.04□□□□□ -1.6
SLC6A4P31645 CDK8P2-201ENST00000415020 547 ntBASIC5.04□□□□□ -1.6
SLC6A4P31645 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.04□□□□□ -1.6
SLC6A4P31645 AC233981.1-201ENST00000423224 461 ntBASIC5.04□□□□□ -1.6
SLC6A4P31645 AC245028.1-201ENST00000423259 256 ntBASIC5.04□□□□□ -1.6
SLC6A4P31645 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.04□□□□□ -1.6
SLC6A4P31645 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SLC6A4P31645 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC5.04□□□□□ -1.6
SLC6A4P31645 OR2B7P-201ENST00000429302 934 ntBASIC5.04□□□□□ -1.6
SLC6A4P31645 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC5.04□□□□□ -1.6
SLC6A4P31645 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC5.04□□□□□ -1.6
SLC6A4P31645 RPL12P18-201ENST00000437175 325 ntBASIC5.04□□□□□ -1.6
SLC6A4P31645 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC5.04□□□□□ -1.6
SLC6A4P31645 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.04□□□□□ -1.6
SLC6A4P31645 SLC25A18P1-201ENST00000449385 454 ntBASIC5.04□□□□□ -1.6
SLC6A4P31645 AC005229.2-201ENST00000456995 399 ntBASIC5.04□□□□□ -1.6
SLC6A4P31645 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC5.04□□□□□ -1.6
SLC6A4P31645 AC021660.1-201ENST00000465006 554 ntBASIC5.04□□□□□ -1.6
SLC6A4P31645 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.04□□□□□ -1.6
SLC6A4P31645 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC5.04□□□□□ -1.6
SLC6A4P31645 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC5.04□□□□□ -1.6
SLC6A4P31645 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC5.04□□□□□ -1.6
SLC6A4P31645 AC109458.1-201ENST00000508858 316 ntBASIC5.04□□□□□ -1.6
SLC6A4P31645 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.04□□□□□ -1.6
SLC6A4P31645 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.04□□□□□ -1.6
SLC6A4P31645 RNA5SP216-201ENST00000516111 123 ntBASIC5.04□□□□□ -1.6
SLC6A4P31645 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.04□□□□□ -1.6
SLC6A4P31645 AF279873.1-201ENST00000523393 313 ntBASIC5.04□□□□□ -1.6
SLC6A4P31645 AC239860.2-201ENST00000525886 270 ntBASIC5.04□□□□□ -1.6
SLC6A4P31645 ZDHHC20P3-201ENST00000531576 336 ntBASIC5.04□□□□□ -1.6
SLC6A4P31645 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.04□□□□□ -1.6
SLC6A4P31645 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC5.04□□□□□ -1.6
SLC6A4P31645 AL049839.1-201ENST00000556151 657 ntBASIC5.04□□□□□ -1.6
SLC6A4P31645 UBE2FP2-201ENST00000566646 462 ntBASIC5.04□□□□□ -1.6
SLC6A4P31645 EIF1P4-201ENST00000572664 335 ntBASIC5.04□□□□□ -1.6
SLC6A4P31645 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.04□□□□□ -1.6
SLC6A4P31645 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.04□□□□□ -1.6
SLC6A4P31645 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.04□□□□□ -1.6
SLC6A4P31645 MIR3667-201ENST00000581025 74 ntBASIC5.04□□□□□ -1.6
SLC6A4P31645 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.04□□□□□ -1.6
SLC6A4P31645 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC5.04□□□□□ -1.6
SLC6A4P31645 AC087683.1-201ENST00000591187 441 ntBASIC5.04□□□□□ -1.6
SLC6A4P31645 AC083899.3-201ENST00000603413 594 ntBASIC5.04□□□□□ -1.6
SLC6A4P31645 AC006363.1-201ENST00000603806 463 ntBASIC5.04□□□□□ -1.6
SLC6A4P31645 AC107304.1-201ENST00000604229 296 ntBASIC5.04□□□□□ -1.6
SLC6A4P31645 AL021997.1-201ENST00000605757 193 ntBASIC5.04□□□□□ -1.6
SLC6A4P31645 AC068276.1-201ENST00000605793 379 ntBASIC5.04□□□□□ -1.6
SLC6A4P31645 AC024560.3-201ENST00000608482 349 ntBASIC5.04□□□□□ -1.6
SLC6A4P31645 AL391497.1-201ENST00000608671 547 ntBASIC5.04□□□□□ -1.6
SLC6A4P31645 AC007497.1-201ENST00000610421 561 ntBASIC5.04□□□□□ -1.6
SLC6A4P31645 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SLC6A4P31645 AC087241.4-201ENST00000612441 480 ntBASIC5.04□□□□□ -1.6
SLC6A4P31645 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.04□□□□□ -1.6
SLC6A4P31645 MIR6810-201ENST00000622701 70 ntBASIC5.04□□□□□ -1.6
SLC6A4P31645 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SLC6A4P31645 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.04□□□□□ -1.6
SLC6A4P31645 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SLC6A4P31645 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SLC6A4P31645 AC008758.3-201ENST00000507003 1829 ntBASIC5.04□□□□□ -1.6
SLC6A4P31645 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SLC6A4P31645 AC092079.1-201ENST00000558620 1985 ntBASIC5.04□□□□□ -1.6
SLC6A4P31645 HSPA8P17-201ENST00000427029 1382 ntBASIC5.04□□□□□ -1.6
SLC6A4P31645 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms