Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 AC074029.1-201ENST00000552531 1044 ntBASIC4.1□□□□□ -1.75
PTPN4P29074 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.1□□□□□ -1.75
PTPN4P29074 TVP23BP1-201ENST00000557500 617 ntBASIC4.1□□□□□ -1.75
PTPN4P29074 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.1□□□□□ -1.75
PTPN4P29074 MTND4LP25-201ENST00000570218 163 ntBASIC4.1□□□□□ -1.75
PTPN4P29074 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.1□□□□□ -1.75
PTPN4P29074 AC090312.2-201ENST00000582687 378 ntBASIC4.1□□□□□ -1.75
PTPN4P29074 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PTPN4P29074 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.1□□□□□ -1.75
PTPN4P29074 AL139286.1-201ENST00000604465 483 ntBASIC4.1□□□□□ -1.75
PTPN4P29074 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.1□□□□□ -1.75
PTPN4P29074 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
PTPN4P29074 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.1□□□□□ -1.75
PTPN4P29074 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
PTPN4P29074 SEC63P2-201ENST00000503863 1939 ntBASIC4.1□□□□□ -1.75
PTPN4P29074 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
PTPN4P29074 MAPK10-373ENST00000641983 6772 ntBASIC4.1□□□□□ -1.75
PTPN4P29074 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
PTPN4P29074 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.1□□□□□ -1.75
PTPN4P29074 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PTPN4P29074 ERCC6-202ENST00000374127 1782 ntBASIC4.09□□□□□ -1.75
PTPN4P29074 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PTPN4P29074 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.09□□□□□ -1.75
PTPN4P29074 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
PTPN4P29074 MARK2P15-201ENST00000432204 2186 ntBASIC4.09□□□□□ -1.75
PTPN4P29074 SPRR2C-201ENST00000290702 219 ntBASIC4.09□□□□□ -1.75
PTPN4P29074 XIAPP3-201ENST00000312918 795 ntBASIC4.09□□□□□ -1.75
PTPN4P29074 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.09□□□□□ -1.75
PTPN4P29074 Y_RNA.110-201ENST00000363220 99 ntBASIC4.09□□□□□ -1.75
PTPN4P29074 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PTPN4P29074 RNU6-98P-201ENST00000384173 107 ntBASIC4.09□□□□□ -1.75
PTPN4P29074 AL161909.1-201ENST00000397390 712 ntBASIC4.09□□□□□ -1.75
PTPN4P29074 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.09□□□□□ -1.75
PTPN4P29074 AL606495.1-201ENST00000422100 813 ntBASIC4.09□□□□□ -1.75
PTPN4P29074 AC073310.1-201ENST00000423226 1033 ntBASIC4.09□□□□□ -1.75
PTPN4P29074 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.09□□□□□ -1.75
PTPN4P29074 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.09□□□□□ -1.75
PTPN4P29074 AC122718.1-201ENST00000439448 744 ntBASIC4.09□□□□□ -1.75
PTPN4P29074 AL512326.1-201ENST00000443050 721 ntBASIC4.09□□□□□ -1.75
PTPN4P29074 CDC27P1-201ENST00000445384 715 ntBASIC4.09□□□□□ -1.75
PTPN4P29074 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC4.09□□□□□ -1.75
PTPN4P29074 SNRPGP5-201ENST00000456003 220 ntBASIC4.09□□□□□ -1.75
PTPN4P29074 FAM133DP-201ENST00000464802 691 ntBASIC4.09□□□□□ -1.75
PTPN4P29074 AC078857.1-201ENST00000469870 667 ntBASIC4.09□□□□□ -1.75
PTPN4P29074 RN7SL691P-201ENST00000494487 301 ntBASIC4.09□□□□□ -1.75
PTPN4P29074 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.09□□□□□ -1.75
PTPN4P29074 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.09□□□□□ -1.75
PTPN4P29074 AC005798.1-201ENST00000513715 387 ntBASIC4.09□□□□□ -1.75
PTPN4P29074 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.09□□□□□ -1.75
PTPN4P29074 RNA5SP49-201ENST00000516450 115 ntBASIC4.09□□□□□ -1.75
PTPN4P29074 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PTPN4P29074 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.09□□□□□ -1.75
PTPN4P29074 OR5AK3P-201ENST00000527486 1297 ntBASIC4.09□□□□□ -1.75
PTPN4P29074 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.09□□□□□ -1.75
PTPN4P29074 OR8R1P-201ENST00000543943 764 ntBASIC4.09□□□□□ -1.75
PTPN4P29074 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.09□□□□□ -1.75
PTPN4P29074 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.09□□□□□ -1.75
PTPN4P29074 AL136520.1-202ENST00000555494 763 ntBASIC4.09□□□□□ -1.75
PTPN4P29074 AC093510.2-201ENST00000562820 896 ntBASIC4.09□□□□□ -1.75
PTPN4P29074 AC106785.1-201ENST00000565935 262 ntBASIC4.09□□□□□ -1.75
PTPN4P29074 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.09□□□□□ -1.75
PTPN4P29074 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC4.09□□□□□ -1.75
PTPN4P29074 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.09□□□□□ -1.75
PTPN4P29074 AC125494.3-201ENST00000602759 455 ntBASIC4.09□□□□□ -1.75
PTPN4P29074 AL512506.1-201ENST00000613918 449 ntBASIC4.09□□□□□ -1.75
PTPN4P29074 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.09□□□□□ -1.75
PTPN4P29074 STMN1P1-201ENST00000617809 440 ntBASIC4.09□□□□□ -1.75
PTPN4P29074 MIR6864-201ENST00000617935 70 ntBASIC4.09□□□□□ -1.75
PTPN4P29074 AP006248.3-201ENST00000623580 594 ntBASIC4.09□□□□□ -1.75
PTPN4P29074 AC244205.2-202ENST00000635781 342 ntBASIC4.09□□□□□ -1.75
PTPN4P29074 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.09□□□□□ -1.75
PTPN4P29074 ATE1-AS1-202ENST00000636460 506 ntBASIC4.09□□□□□ -1.75
PTPN4P29074 AL773545.4-201ENST00000637262 310 ntBASIC4.09□□□□□ -1.75
PTPN4P29074 AL513478.4-201ENST00000641636 310 ntBASIC4.09□□□□□ -1.75
PTPN4P29074 AL512283.1-201ENST00000606756 1384 ntBASIC4.09□□□□□ -1.75
PTPN4P29074 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
PTPN4P29074 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.09□□□□□ -1.75
PTPN4P29074 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
PTPN4P29074 HSPA8P1-201ENST00000425843 1833 ntBASIC4.09□□□□□ -1.76
PTPN4P29074 AC046144.1-201ENST00000478559 1853 ntBASIC4.09□□□□□ -1.76
PTPN4P29074 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.09□□□□□ -1.76
PTPN4P29074 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
PTPN4P29074 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.09□□□□□ -1.76
PTPN4P29074 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.08□□□□□ -1.76
PTPN4P29074 RNA5SP175-201ENST00000364275 119 ntBASIC4.08□□□□□ -1.76
PTPN4P29074 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PTPN4P29074 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
PTPN4P29074 HMGN2P8-201ENST00000391458 268 ntBASIC4.08□□□□□ -1.76
PTPN4P29074 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.08□□□□□ -1.76
PTPN4P29074 RNU6-628P-201ENST00000410675 107 ntBASIC4.08□□□□□ -1.76
PTPN4P29074 RHEBP3-201ENST00000411920 351 ntBASIC4.08□□□□□ -1.76
PTPN4P29074 NRBF2P2-201ENST00000413087 861 ntBASIC4.08□□□□□ -1.76
PTPN4P29074 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTPN4P29074 AC092832.1-201ENST00000422934 400 ntBASIC4.08□□□□□ -1.76
PTPN4P29074 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.08□□□□□ -1.76
PTPN4P29074 COX6CP15-201ENST00000426313 211 ntBASIC4.08□□□□□ -1.76
PTPN4P29074 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PTPN4P29074 AC096638.2-201ENST00000434965 711 ntBASIC4.08□□□□□ -1.76
PTPN4P29074 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.08□□□□□ -1.76
PTPN4P29074 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms