Protein–RNA interactions for Protein: P20585

MSH3, DNA mismatch repair protein Msh3, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3P20585 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.25□□□□□ -1.73
MSH3P20585 CR769776.1-201ENST00000441254 787 ntBASIC4.25□□□□□ -1.73
MSH3P20585 AL591719.1-201ENST00000444669 744 ntBASIC4.25□□□□□ -1.73
MSH3P20585 MTND1P31-201ENST00000449206 961 ntBASIC4.25□□□□□ -1.73
MSH3P20585 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.25□□□□□ -1.73
MSH3P20585 PTGES3P5-201ENST00000455109 434 ntBASIC4.25□□□□□ -1.73
MSH3P20585 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.25□□□□□ -1.73
MSH3P20585 AC104687.1-201ENST00000485829 412 ntBASIC4.25□□□□□ -1.73
MSH3P20585 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.25□□□□□ -1.73
MSH3P20585 RPL35P6-201ENST00000490024 372 ntBASIC4.25□□□□□ -1.73
MSH3P20585 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.25□□□□□ -1.73
MSH3P20585 AC008565.1-201ENST00000509046 885 ntBASIC4.25□□□□□ -1.73
MSH3P20585 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.25□□□□□ -1.73
MSH3P20585 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.25□□□□□ -1.73
MSH3P20585 IFITM8P-201ENST00000522529 394 ntBASIC4.25□□□□□ -1.73
MSH3P20585 HIGD1AP5-201ENST00000529959 259 ntBASIC4.25□□□□□ -1.73
MSH3P20585 DEFB130C-202ENST00000530001 230 ntBASIC4.25□□□□□ -1.73
MSH3P20585 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.25□□□□□ -1.73
MSH3P20585 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
MSH3P20585 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.25□□□□□ -1.73
MSH3P20585 POLR2KP1-201ENST00000553226 168 ntBASIC4.25□□□□□ -1.73
MSH3P20585 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
MSH3P20585 TVP23BP1-201ENST00000557500 617 ntBASIC4.25□□□□□ -1.73
MSH3P20585 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.25□□□□□ -1.73
MSH3P20585 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.25□□□□□ -1.73
MSH3P20585 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.25□□□□□ -1.73
MSH3P20585 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.25□□□□□ -1.73
MSH3P20585 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.25□□□□□ -1.73
MSH3P20585 CYP2C60P-201ENST00000566088 139 ntBASIC4.25□□□□□ -1.73
MSH3P20585 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.25□□□□□ -1.73
MSH3P20585 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.25□□□□□ -1.73
MSH3P20585 CCDC58P3-201ENST00000590792 430 ntBASIC4.25□□□□□ -1.73
MSH3P20585 IPO5P1-202ENST00000600039 287 ntBASIC4.25□□□□□ -1.73
MSH3P20585 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.25□□□□□ -1.73
MSH3P20585 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.25□□□□□ -1.73
MSH3P20585 AL035411.2-201ENST00000604022 421 ntBASIC4.25□□□□□ -1.73
MSH3P20585 AC055764.2-201ENST00000610089 670 ntBASIC4.25□□□□□ -1.73
MSH3P20585 AL138478.1-201ENST00000612252 832 ntBASIC4.25□□□□□ -1.73
MSH3P20585 AC114781.5-201ENST00000615297 108 ntBASIC4.25□□□□□ -1.73
MSH3P20585 AC007546.1-201ENST00000619452 559 ntBASIC4.25□□□□□ -1.73
MSH3P20585 AC012020.1-201ENST00000624541 1728 ntBASIC4.25□□□□□ -1.73
MSH3P20585 AP000843.1-201ENST00000624880 701 ntBASIC4.25□□□□□ -1.73
MSH3P20585 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.25□□□□□ -1.73
MSH3P20585 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
MSH3P20585 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
MSH3P20585 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.25□□□□□ -1.73
MSH3P20585 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.25□□□□□ -1.73
MSH3P20585 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
MSH3P20585 AC011266.1-201ENST00000624119 3569 ntBASIC4.25□□□□□ -1.73
MSH3P20585 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
MSH3P20585 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
MSH3P20585 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
MSH3P20585 AC007390.2-201ENST00000606229 3803 ntBASIC4.25□□□□□ -1.73
MSH3P20585 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.24□□□□□ -1.73
MSH3P20585 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
MSH3P20585 RNA5SP443-201ENST00000363083 132 ntBASIC4.24□□□□□ -1.73
MSH3P20585 SNORD116-12-201ENST00000384468 92 ntBASIC4.24□□□□□ -1.73
MSH3P20585 MIR141-201ENST00000384975 95 ntBASIC4.24□□□□□ -1.73
MSH3P20585 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
MSH3P20585 AL583835.1-201ENST00000399570 407 ntBASIC4.24□□□□□ -1.73
MSH3P20585 RNA5SP36-201ENST00000410197 133 ntBASIC4.24□□□□□ -1.73
MSH3P20585 RNA5SP104-201ENST00000410989 118 ntBASIC4.24□□□□□ -1.73
MSH3P20585 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.24□□□□□ -1.73
MSH3P20585 NRBF2P2-201ENST00000413087 861 ntBASIC4.24□□□□□ -1.73
MSH3P20585 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.24□□□□□ -1.73
MSH3P20585 TAF13P2-201ENST00000416876 286 ntBASIC4.24□□□□□ -1.73
MSH3P20585 RPS3AP37-201ENST00000419176 745 ntBASIC4.24□□□□□ -1.73
MSH3P20585 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC4.24□□□□□ -1.73
MSH3P20585 C1DP1-201ENST00000426049 402 ntBASIC4.24□□□□□ -1.73
MSH3P20585 AL157831.1-201ENST00000426134 473 ntBASIC4.24□□□□□ -1.73
MSH3P20585 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.24□□□□□ -1.73
MSH3P20585 RPL12P46-201ENST00000436610 195 ntBASIC4.24□□□□□ -1.73
MSH3P20585 AC002542.1-201ENST00000440683 193 ntBASIC4.24□□□□□ -1.73
MSH3P20585 MTCYBP42-201ENST00000444653 1130 ntBASIC4.24□□□□□ -1.73
MSH3P20585 AL589880.1-201ENST00000448271 287 ntBASIC4.24□□□□□ -1.73
MSH3P20585 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.24□□□□□ -1.73
MSH3P20585 RPL23AP81-201ENST00000455252 467 ntBASIC4.24□□□□□ -1.73
MSH3P20585 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.24□□□□□ -1.73
MSH3P20585 AC079804.1-201ENST00000461922 436 ntBASIC4.24□□□□□ -1.73
MSH3P20585 RPL23AP12-201ENST00000467573 473 ntBASIC4.24□□□□□ -1.73
MSH3P20585 RPS6P4-201ENST00000494693 758 ntBASIC4.24□□□□□ -1.73
MSH3P20585 MTCYBP35-201ENST00000503630 1137 ntBASIC4.24□□□□□ -1.73
MSH3P20585 AC091860.1-201ENST00000505723 432 ntBASIC4.24□□□□□ -1.73
MSH3P20585 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.24□□□□□ -1.73
MSH3P20585 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.24□□□□□ -1.73
MSH3P20585 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.24□□□□□ -1.73
MSH3P20585 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.24□□□□□ -1.73
MSH3P20585 AC006064.5-201ENST00000541782 248 ntBASIC4.24□□□□□ -1.73
MSH3P20585 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.24□□□□□ -1.73
MSH3P20585 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.24□□□□□ -1.73
MSH3P20585 AL109766.1-201ENST00000555080 552 ntBASIC4.24□□□□□ -1.73
MSH3P20585 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.24□□□□□ -1.73
MSH3P20585 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.24□□□□□ -1.73
MSH3P20585 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.24□□□□□ -1.73
MSH3P20585 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
MSH3P20585 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.24□□□□□ -1.73
MSH3P20585 AC002487.1-201ENST00000604565 994 ntBASIC4.24□□□□□ -1.73
MSH3P20585 AL031666.3-201ENST00000609320 1006 ntBASIC4.24□□□□□ -1.73
MSH3P20585 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
MSH3P20585 MIR7973-1-201ENST00000614683 76 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms