Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 RNU1-33P-201ENST00000364249 162 ntBASIC3.11□□□□□ -1.91
FREM3P0C091 OR52E6-202ENST00000379946 954 ntBASIC3.11□□□□□ -1.91
FREM3P0C091 AP002088.1-201ENST00000382740 395 ntBASIC3.11□□□□□ -1.91
FREM3P0C091 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
FREM3P0C091 DPY19L1P2-201ENST00000426647 915 ntBASIC3.11□□□□□ -1.91
FREM3P0C091 AC097262.1-201ENST00000452559 548 ntBASIC3.11□□□□□ -1.91
FREM3P0C091 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.11□□□□□ -1.91
FREM3P0C091 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.11□□□□□ -1.91
FREM3P0C091 NDUFB9P3-201ENST00000521269 501 ntBASIC3.11□□□□□ -1.91
FREM3P0C091 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC3.11□□□□□ -1.91
FREM3P0C091 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
FREM3P0C091 DUXAP6-201ENST00000553858 601 ntBASIC3.11□□□□□ -1.91
FREM3P0C091 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.11□□□□□ -1.91
FREM3P0C091 BNIP3P38-201ENST00000601117 544 ntBASIC3.11□□□□□ -1.91
FREM3P0C091 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.11□□□□□ -1.91
FREM3P0C091 AL158062.1-201ENST00000619632 745 ntBASIC3.11□□□□□ -1.91
FREM3P0C091 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.11□□□□□ -1.91
FREM3P0C091 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
FREM3P0C091 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
FREM3P0C091 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
FREM3P0C091 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.11□□□□□ -1.91
FREM3P0C091 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.11□□□□□ -1.91
FREM3P0C091 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
FREM3P0C091 MIR708-201ENST00000390708 88 ntBASIC3.11□□□□□ -1.91
FREM3P0C091 PTMAP5-201ENST00000393073 333 ntBASIC3.11□□□□□ -1.91
FREM3P0C091 AC096664.2-201ENST00000411843 406 ntBASIC3.11□□□□□ -1.91
FREM3P0C091 Z99755.1-201ENST00000414048 380 ntBASIC3.11□□□□□ -1.91
FREM3P0C091 OSTCP5-201ENST00000425293 453 ntBASIC3.11□□□□□ -1.91
FREM3P0C091 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
FREM3P0C091 BX679664.1-201ENST00000434429 253 ntBASIC3.11□□□□□ -1.91
FREM3P0C091 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC3.11□□□□□ -1.91
FREM3P0C091 MTCO3P20-201ENST00000454926 688 ntBASIC3.11□□□□□ -1.91
FREM3P0C091 RPL7P38-201ENST00000488396 739 ntBASIC3.11□□□□□ -1.91
FREM3P0C091 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.11□□□□□ -1.91
FREM3P0C091 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.11□□□□□ -1.91
FREM3P0C091 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.11□□□□□ -1.91
FREM3P0C091 RNU1-143P-201ENST00000516296 146 ntBASIC3.11□□□□□ -1.91
FREM3P0C091 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.11□□□□□ -1.91
FREM3P0C091 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC3.11□□□□□ -1.91
FREM3P0C091 AC006960.3-201ENST00000561845 705 ntBASIC3.11□□□□□ -1.91
FREM3P0C091 AC008507.1-201ENST00000587506 734 ntBASIC3.11□□□□□ -1.91
FREM3P0C091 U1.23-201ENST00000610293 146 ntBASIC3.11□□□□□ -1.91
FREM3P0C091 RNU1-68P-201ENST00000615382 146 ntBASIC3.11□□□□□ -1.91
FREM3P0C091 U1.39-201ENST00000621562 146 ntBASIC3.11□□□□□ -1.91
FREM3P0C091 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.11□□□□□ -1.91
FREM3P0C091 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.11□□□□□ -1.91
FREM3P0C091 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
FREM3P0C091 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
FREM3P0C091 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
FREM3P0C091 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
FREM3P0C091 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
FREM3P0C091 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.1□□□□□ -1.91
FREM3P0C091 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
FREM3P0C091 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.1□□□□□ -1.91
FREM3P0C091 RNA5SP50-201ENST00000363731 107 ntBASIC3.1□□□□□ -1.91
FREM3P0C091 RPL23AP48-201ENST00000406913 488 ntBASIC3.1□□□□□ -1.91
FREM3P0C091 RPL21P110-201ENST00000433345 446 ntBASIC3.1□□□□□ -1.91
FREM3P0C091 MRPS31P2-201ENST00000451581 518 ntBASIC3.1□□□□□ -1.91
FREM3P0C091 RPL12P26-201ENST00000452430 487 ntBASIC3.1□□□□□ -1.91
FREM3P0C091 PCBP2P3-201ENST00000509726 843 ntBASIC3.1□□□□□ -1.91
FREM3P0C091 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.1□□□□□ -1.91
FREM3P0C091 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.1□□□□□ -1.91
FREM3P0C091 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.1□□□□□ -1.91
FREM3P0C091 AC005476.1-201ENST00000554427 397 ntBASIC3.1□□□□□ -1.91
FREM3P0C091 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.1□□□□□ -1.91
FREM3P0C091 AC125494.3-201ENST00000602759 455 ntBASIC3.1□□□□□ -1.91
FREM3P0C091 BNIP3P19-201ENST00000605397 577 ntBASIC3.1□□□□□ -1.91
FREM3P0C091 AL732618.1-201ENST00000623251 301 ntBASIC3.1□□□□□ -1.91
FREM3P0C091 AC018692.3-201ENST00000623929 123 ntBASIC3.1□□□□□ -1.91
FREM3P0C091 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
FREM3P0C091 TNPO1P3-201ENST00000436471 2662 ntBASIC3.1□□□□□ -1.91
FREM3P0C091 AL365361.1-201ENST00000566942 3481 ntBASIC3.1□□□□□ -1.91
FREM3P0C091 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.1□□□□□ -1.91
FREM3P0C091 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
FREM3P0C091 AL049781.1-201ENST00000623195 3585 ntBASIC3.1□□□□□ -1.91
FREM3P0C091 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.1□□□□□ -1.91
FREM3P0C091 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
FREM3P0C091 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.1□□□□□ -1.91
FREM3P0C091 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.1□□□□□ -1.91
FREM3P0C091 AL136131.1-201ENST00000406079 803 ntBASIC3.1□□□□□ -1.91
FREM3P0C091 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.1□□□□□ -1.91
FREM3P0C091 AL034379.1-201ENST00000423216 253 ntBASIC3.1□□□□□ -1.91
FREM3P0C091 AC091390.3-201ENST00000426478 338 ntBASIC3.1□□□□□ -1.91
FREM3P0C091 RPL23AP69-201ENST00000431134 458 ntBASIC3.1□□□□□ -1.91
FREM3P0C091 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.1□□□□□ -1.91
FREM3P0C091 ARL2BPP6-201ENST00000512757 439 ntBASIC3.1□□□□□ -1.91
FREM3P0C091 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.1□□□□□ -1.91
FREM3P0C091 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.1□□□□□ -1.91
FREM3P0C091 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.1□□□□□ -1.91
FREM3P0C091 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.1□□□□□ -1.91
FREM3P0C091 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
FREM3P0C091 AC068647.1-201ENST00000489539 2265 ntBASIC3.09□□□□□ -1.91
FREM3P0C091 RNU6-1263P-201ENST00000384601 106 ntBASIC3.09□□□□□ -1.91
FREM3P0C091 MIR491-201ENST00000384877 84 ntBASIC3.09□□□□□ -1.91
FREM3P0C091 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.09□□□□□ -1.91
FREM3P0C091 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC3.09□□□□□ -1.91
FREM3P0C091 RN7SL809P-201ENST00000482040 297 ntBASIC3.09□□□□□ -1.91
FREM3P0C091 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.09□□□□□ -1.91
FREM3P0C091 AC010285.3-201ENST00000511668 676 ntBASIC3.09□□□□□ -1.91
FREM3P0C091 SCARNA20.6-201ENST00000517251 106 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 158.6 ms