Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.06□□□□□ -1.76
TPM1P09493 RNU6-55P-201ENST00000411092 107 ntBASIC4.06□□□□□ -1.76
TPM1P09493 RNU6-954P-201ENST00000411355 107 ntBASIC4.06□□□□□ -1.76
TPM1P09493 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.06□□□□□ -1.76
TPM1P09493 RPL17P36-201ENST00000420302 549 ntBASIC4.06□□□□□ -1.76
TPM1P09493 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.06□□□□□ -1.76
TPM1P09493 AL390879.2-203ENST00000426943 1121 ntBASIC4.06□□□□□ -1.76
TPM1P09493 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.06□□□□□ -1.76
TPM1P09493 AL158071.1-201ENST00000430315 461 ntBASIC4.06□□□□□ -1.76
TPM1P09493 AC007563.3-201ENST00000433233 371 ntBASIC4.06□□□□□ -1.76
TPM1P09493 Z74696.2-201ENST00000436514 498 ntBASIC4.06□□□□□ -1.76
TPM1P09493 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.06□□□□□ -1.76
TPM1P09493 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.06□□□□□ -1.76
TPM1P09493 NUTF2P3-201ENST00000448540 384 ntBASIC4.06□□□□□ -1.76
TPM1P09493 MRPS31P2-201ENST00000451581 518 ntBASIC4.06□□□□□ -1.76
TPM1P09493 HMGB1P26-201ENST00000452520 628 ntBASIC4.06□□□□□ -1.76
TPM1P09493 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.06□□□□□ -1.76
TPM1P09493 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.06□□□□□ -1.76
TPM1P09493 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
TPM1P09493 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.06□□□□□ -1.76
TPM1P09493 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.06□□□□□ -1.76
TPM1P09493 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.06□□□□□ -1.76
TPM1P09493 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.06□□□□□ -1.76
TPM1P09493 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.06□□□□□ -1.76
TPM1P09493 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.06□□□□□ -1.76
TPM1P09493 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.06□□□□□ -1.76
TPM1P09493 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.06□□□□□ -1.76
TPM1P09493 TRAV15-201ENST00000556680 249 ntBASIC4.06□□□□□ -1.76
TPM1P09493 MIR3138-201ENST00000585238 82 ntBASIC4.06□□□□□ -1.76
TPM1P09493 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TPM1P09493 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TPM1P09493 SNORA62.6-201ENST00000606322 83 ntBASIC4.06□□□□□ -1.76
TPM1P09493 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TPM1P09493 AL445567.2-201ENST00000618935 498 ntBASIC4.06□□□□□ -1.76
TPM1P09493 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.06□□□□□ -1.76
TPM1P09493 CDRT1-208ENST00000630868 794 ntBASIC4.06□□□□□ -1.76
TPM1P09493 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.06□□□□□ -1.76
TPM1P09493 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TPM1P09493 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.06□□□□□ -1.76
TPM1P09493 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TPM1P09493 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TPM1P09493 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
TPM1P09493 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
TPM1P09493 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.05□□□□□ -1.76
TPM1P09493 RAD1P1-201ENST00000231383 813 ntBASIC4.05□□□□□ -1.76
TPM1P09493 SNORA58B-201ENST00000364259 136 ntBASIC4.05□□□□□ -1.76
TPM1P09493 RNA5SP235-201ENST00000365411 114 ntBASIC4.05□□□□□ -1.76
TPM1P09493 MIR323B-201ENST00000385269 82 ntBASIC4.05□□□□□ -1.76
TPM1P09493 AL136116.1-201ENST00000403591 381 ntBASIC4.05□□□□□ -1.76
TPM1P09493 AC245028.1-201ENST00000423259 256 ntBASIC4.05□□□□□ -1.76
TPM1P09493 AC105402.2-201ENST00000438503 358 ntBASIC4.05□□□□□ -1.76
TPM1P09493 CYCSP42-201ENST00000450823 238 ntBASIC4.05□□□□□ -1.76
TPM1P09493 CYCSP53-201ENST00000455540 265 ntBASIC4.05□□□□□ -1.76
TPM1P09493 RPS20P32-201ENST00000456044 356 ntBASIC4.05□□□□□ -1.76
TPM1P09493 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TPM1P09493 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.05□□□□□ -1.76
TPM1P09493 RPL37P6-202ENST00000464216 403 ntBASIC4.05□□□□□ -1.76
TPM1P09493 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.05□□□□□ -1.76
TPM1P09493 RPL23AP44-201ENST00000482216 473 ntBASIC4.05□□□□□ -1.76
TPM1P09493 AC231760.1-201ENST00000498002 260 ntBASIC4.05□□□□□ -1.76
TPM1P09493 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TPM1P09493 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.05□□□□□ -1.76
TPM1P09493 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.05□□□□□ -1.76
TPM1P09493 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.05□□□□□ -1.76
TPM1P09493 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.05□□□□□ -1.76
TPM1P09493 AP000926.4-201ENST00000527351 454 ntBASIC4.05□□□□□ -1.76
TPM1P09493 MTND4LP24-201ENST00000572277 291 ntBASIC4.05□□□□□ -1.76
TPM1P09493 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.05□□□□□ -1.76
TPM1P09493 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.05□□□□□ -1.76
TPM1P09493 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.05□□□□□ -1.76
TPM1P09493 AC069304.3-201ENST00000603938 1084 ntBASIC4.05□□□□□ -1.76
TPM1P09493 AC138473.1-201ENST00000605717 526 ntBASIC4.05□□□□□ -1.76
TPM1P09493 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TPM1P09493 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.05□□□□□ -1.76
TPM1P09493 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.05□□□□□ -1.76
TPM1P09493 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TPM1P09493 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.05□□□□□ -1.76
TPM1P09493 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.04□□□□□ -1.76
TPM1P09493 SEPT7P7-201ENST00000420492 1301 ntBASIC4.04□□□□□ -1.76
TPM1P09493 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TPM1P09493 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TPM1P09493 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
TPM1P09493 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
TPM1P09493 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
TPM1P09493 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.04□□□□□ -1.76
TPM1P09493 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.04□□□□□ -1.76
TPM1P09493 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.04□□□□□ -1.76
TPM1P09493 RPL12P26-201ENST00000452430 487 ntBASIC4.04□□□□□ -1.76
TPM1P09493 AC010401.1-201ENST00000463867 348 ntBASIC4.04□□□□□ -1.76
TPM1P09493 AC110792.2-201ENST00000510278 224 ntBASIC4.04□□□□□ -1.76
TPM1P09493 SNORA31.9-201ENST00000516429 84 ntBASIC4.04□□□□□ -1.76
TPM1P09493 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.04□□□□□ -1.76
TPM1P09493 AC011602.1-201ENST00000546484 331 ntBASIC4.04□□□□□ -1.76
TPM1P09493 AC120057.2-201ENST00000571520 271 ntBASIC4.04□□□□□ -1.76
TPM1P09493 AC015726.1-201ENST00000602353 681 ntBASIC4.04□□□□□ -1.76
TPM1P09493 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.04□□□□□ -1.76
TPM1P09493 U6.98-201ENST00000637157 84 ntBASIC4.04□□□□□ -1.76
TPM1P09493 AL133383.2-201ENST00000622958 2336 ntBASIC4.04□□□□□ -1.76
TPM1P09493 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
TPM1P09493 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms