Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC5.9□□□□□ -1.46
APPP05067 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
APPP05067 AL021997.1-201ENST00000605757 193 ntBASIC5.9□□□□□ -1.46
APPP05067 Mico1.1-201ENST00000611698 204 ntBASIC5.9□□□□□ -1.46
APPP05067 AC073968.1-201ENST00000618594 637 ntBASIC5.9□□□□□ -1.46
APPP05067 AC087385.3-201ENST00000620477 187 ntBASIC5.9□□□□□ -1.46
APPP05067 AL356266.1-201ENST00000623311 483 ntBASIC5.9□□□□□ -1.46
APPP05067 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
APPP05067 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.9□□□□□ -1.46
APPP05067 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
APPP05067 AC011477.1-204ENST00000623416 1325 ntBASIC5.9□□□□□ -1.47
APPP05067 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
APPP05067 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.9□□□□□ -1.47
APPP05067 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
APPP05067 VPS35P1-201ENST00000563400 1518 ntBASIC5.89□□□□□ -1.47
APPP05067 DDX18P4-201ENST00000511690 1966 ntBASIC5.89□□□□□ -1.47
APPP05067 AC091046.3-201ENST00000631455 1574 ntBASIC5.89□□□□□ -1.47
APPP05067 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
APPP05067 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.89□□□□□ -1.47
APPP05067 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
APPP05067 CYCSP45-201ENST00000402289 315 ntBASIC5.89□□□□□ -1.47
APPP05067 AL121978.1-201ENST00000402778 359 ntBASIC5.89□□□□□ -1.47
APPP05067 EIF4A1P3-201ENST00000411521 244 ntBASIC5.89□□□□□ -1.47
APPP05067 TPT1P2-201ENST00000413105 503 ntBASIC5.89□□□□□ -1.47
APPP05067 MTCO2P34-201ENST00000421994 607 ntBASIC5.89□□□□□ -1.47
APPP05067 CENPIP1-201ENST00000425713 902 ntBASIC5.89□□□□□ -1.47
APPP05067 AL590103.1-201ENST00000434488 307 ntBASIC5.89□□□□□ -1.47
APPP05067 AL031663.1-201ENST00000437445 219 ntBASIC5.89□□□□□ -1.47
APPP05067 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.89□□□□□ -1.47
APPP05067 TRIM60P18-201ENST00000441518 828 ntBASIC5.89□□□□□ -1.47
APPP05067 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC5.89□□□□□ -1.47
APPP05067 EPS15P1-201ENST00000448836 336 ntBASIC5.89□□□□□ -1.47
APPP05067 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.89□□□□□ -1.47
APPP05067 RPL23AP12-201ENST00000467573 473 ntBASIC5.89□□□□□ -1.47
APPP05067 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.89□□□□□ -1.47
APPP05067 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.89□□□□□ -1.47
APPP05067 RNU2-30P-201ENST00000516209 141 ntBASIC5.89□□□□□ -1.47
APPP05067 RNU6-678P-201ENST00000516832 109 ntBASIC5.89□□□□□ -1.47
APPP05067 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.89□□□□□ -1.47
APPP05067 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
APPP05067 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.89□□□□□ -1.47
APPP05067 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.89□□□□□ -1.47
APPP05067 GTF2IP22-201ENST00000554443 182 ntBASIC5.89□□□□□ -1.47
APPP05067 TRAV15-201ENST00000556680 249 ntBASIC5.89□□□□□ -1.47
APPP05067 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC5.89□□□□□ -1.47
APPP05067 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
APPP05067 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.89□□□□□ -1.47
APPP05067 AC115085.1-201ENST00000588924 229 ntBASIC5.89□□□□□ -1.47
APPP05067 AL031320.1-201ENST00000604177 357 ntBASIC5.89□□□□□ -1.47
APPP05067 AC087783.2-201ENST00000605070 562 ntBASIC5.89□□□□□ -1.47
APPP05067 AC005084.1-201ENST00000605160 304 ntBASIC5.89□□□□□ -1.47
APPP05067 AL133243.1-201ENST00000614487 366 ntBASIC5.89□□□□□ -1.47
APPP05067 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC5.89□□□□□ -1.47
APPP05067 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
APPP05067 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
APPP05067 MTND4P34-201ENST00000572715 1371 ntBASIC5.89□□□□□ -1.47
APPP05067 AL133243.3-201ENST00000617415 3004 ntBASIC5.89□□□□□ -1.47
APPP05067 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
APPP05067 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
APPP05067 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
APPP05067 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
APPP05067 SAMMSON-226ENST00000642089 1582 ntBASIC5.89□□□□□ -1.47
APPP05067 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
APPP05067 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
APPP05067 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
APPP05067 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
APPP05067 SMG1P6-201ENST00000532337 2930 ntBASIC5.88□□□□□ -1.47
APPP05067 AC016716.1-201ENST00000265882 708 ntBASIC5.88□□□□□ -1.47
APPP05067 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
APPP05067 AC013442.1-201ENST00000397347 228 ntBASIC5.88□□□□□ -1.47
APPP05067 RPS24P12-201ENST00000402084 394 ntBASIC5.88□□□□□ -1.47
APPP05067 AL357515.1-201ENST00000402967 542 ntBASIC5.88□□□□□ -1.47
APPP05067 AL355379.1-201ENST00000405542 640 ntBASIC5.88□□□□□ -1.47
APPP05067 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.88□□□□□ -1.47
APPP05067 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.88□□□□□ -1.47
APPP05067 TBCAP2-201ENST00000416175 326 ntBASIC5.88□□□□□ -1.47
APPP05067 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.88□□□□□ -1.47
APPP05067 AC073069.1-201ENST00000428657 441 ntBASIC5.88□□□□□ -1.47
APPP05067 PPIAP17-201ENST00000438507 471 ntBASIC5.88□□□□□ -1.47
APPP05067 AL772161.1-201ENST00000439130 476 ntBASIC5.88□□□□□ -1.47
APPP05067 AC004865.1-201ENST00000442276 1003 ntBASIC5.88□□□□□ -1.47
APPP05067 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC5.88□□□□□ -1.47
APPP05067 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.88□□□□□ -1.47
APPP05067 PNPLA4P1-201ENST00000458328 305 ntBASIC5.88□□□□□ -1.47
APPP05067 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.88□□□□□ -1.47
APPP05067 RPL23AP56-201ENST00000460778 453 ntBASIC5.88□□□□□ -1.47
APPP05067 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
APPP05067 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
APPP05067 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
APPP05067 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
APPP05067 ATP1B1P1-201ENST00000509767 915 ntBASIC5.88□□□□□ -1.47
APPP05067 AF213884.2-201ENST00000510417 903 ntBASIC5.88□□□□□ -1.47
APPP05067 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
APPP05067 RNA5SP135-201ENST00000517019 125 ntBASIC5.88□□□□□ -1.47
APPP05067 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.88□□□□□ -1.47
APPP05067 AC106038.2-201ENST00000520706 568 ntBASIC5.88□□□□□ -1.47
APPP05067 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC5.88□□□□□ -1.47
APPP05067 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.88□□□□□ -1.47
APPP05067 SMARCE1P4-201ENST00000523647 241 ntBASIC5.88□□□□□ -1.47
APPP05067 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms