Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CD74P04233 RNU4-39P-201ENST00000362455 127 ntBASIC3.26□□□□□ -1.89
CD74P04233 RNU1-132P-201ENST00000364300 164 ntBASIC3.26□□□□□ -1.89
CD74P04233 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CD74P04233 RPS27AP11-201ENST00000402798 447 ntBASIC3.26□□□□□ -1.89
CD74P04233 AL590704.1-201ENST00000402856 794 ntBASIC3.26□□□□□ -1.89
CD74P04233 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.26□□□□□ -1.89
CD74P04233 HSPE1P12-201ENST00000412576 301 ntBASIC3.26□□□□□ -1.89
CD74P04233 AC105402.1-201ENST00000413336 545 ntBASIC3.26□□□□□ -1.89
CD74P04233 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CD74P04233 RPS29P17-201ENST00000430795 166 ntBASIC3.26□□□□□ -1.89
CD74P04233 MTND4LP7-201ENST00000431728 294 ntBASIC3.26□□□□□ -1.89
CD74P04233 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.26□□□□□ -1.89
CD74P04233 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.26□□□□□ -1.89
CD74P04233 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.26□□□□□ -1.89
CD74P04233 HMGB3P8-201ENST00000449709 577 ntBASIC3.26□□□□□ -1.89
CD74P04233 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.26□□□□□ -1.89
CD74P04233 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.26□□□□□ -1.89
CD74P04233 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.26□□□□□ -1.89
CD74P04233 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.26□□□□□ -1.89
CD74P04233 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.26□□□□□ -1.89
CD74P04233 MTATP6P22-201ENST00000507369 598 ntBASIC3.26□□□□□ -1.89
CD74P04233 AC108157.1-201ENST00000510511 539 ntBASIC3.26□□□□□ -1.89
CD74P04233 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.26□□□□□ -1.89
CD74P04233 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.26□□□□□ -1.89
CD74P04233 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.26□□□□□ -1.89
CD74P04233 AC091516.1-201ENST00000549191 703 ntBASIC3.26□□□□□ -1.89
CD74P04233 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.26□□□□□ -1.89
CD74P04233 AC023158.1-201ENST00000561632 1025 ntBASIC3.26□□□□□ -1.89
CD74P04233 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.26□□□□□ -1.89
CD74P04233 AC136624.4-201ENST00000573044 370 ntBASIC3.26□□□□□ -1.89
CD74P04233 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.26□□□□□ -1.89
CD74P04233 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.26□□□□□ -1.89
CD74P04233 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.26□□□□□ -1.89
CD74P04233 AL356218.2-201ENST00000605264 187 ntBASIC3.26□□□□□ -1.89
CD74P04233 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.26□□□□□ -1.89
CD74P04233 AC018754.1-201ENST00000607486 925 ntBASIC3.26□□□□□ -1.89
CD74P04233 AC112503.1-201ENST00000608436 391 ntBASIC3.26□□□□□ -1.89
CD74P04233 AL162233.1-201ENST00000620014 944 ntBASIC3.26□□□□□ -1.89
CD74P04233 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.26□□□□□ -1.89
CD74P04233 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.26□□□□□ -1.89
CD74P04233 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.26□□□□□ -1.89
CD74P04233 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CD74P04233 AC006042.3-201ENST00000454684 1469 ntBASIC3.26□□□□□ -1.89
CD74P04233 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.25□□□□□ -1.89
CD74P04233 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CD74P04233 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CD74P04233 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
CD74P04233 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CD74P04233 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CD74P04233 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.25□□□□□ -1.89
CD74P04233 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CD74P04233 SNORA70.2-201ENST00000364506 135 ntBASIC3.25□□□□□ -1.89
CD74P04233 AC068538.1-201ENST00000376856 336 ntBASIC3.25□□□□□ -1.89
CD74P04233 RNU6-40P-201ENST00000384254 107 ntBASIC3.25□□□□□ -1.89
CD74P04233 RNU6-185P-201ENST00000384421 107 ntBASIC3.25□□□□□ -1.89
CD74P04233 MIR153-1-201ENST00000384914 90 ntBASIC3.25□□□□□ -1.89
CD74P04233 MIR199A2-201ENST00000385289 110 ntBASIC3.25□□□□□ -1.89
CD74P04233 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
CD74P04233 AL590290.1-201ENST00000405336 380 ntBASIC3.25□□□□□ -1.89
CD74P04233 RNU2-37P-201ENST00000410695 177 ntBASIC3.25□□□□□ -1.89
CD74P04233 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.25□□□□□ -1.89
CD74P04233 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.25□□□□□ -1.89
CD74P04233 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.25□□□□□ -1.89
CD74P04233 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.25□□□□□ -1.89
CD74P04233 MED6P1-201ENST00000439659 713 ntBASIC3.25□□□□□ -1.89
CD74P04233 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.25□□□□□ -1.89
CD74P04233 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.25□□□□□ -1.89
CD74P04233 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.25□□□□□ -1.89
CD74P04233 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.25□□□□□ -1.89
CD74P04233 AL136097.1-201ENST00000456945 913 ntBASIC3.25□□□□□ -1.89
CD74P04233 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.25□□□□□ -1.89
CD74P04233 UBE2CP3-201ENST00000502715 450 ntBASIC3.25□□□□□ -1.89
CD74P04233 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.25□□□□□ -1.89
CD74P04233 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
CD74P04233 PCBP2P3-201ENST00000509726 843 ntBASIC3.25□□□□□ -1.89
CD74P04233 ARL2BPP6-201ENST00000512757 439 ntBASIC3.25□□□□□ -1.89
CD74P04233 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.25□□□□□ -1.89
CD74P04233 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.25□□□□□ -1.89
CD74P04233 AL139174.1-201ENST00000531489 886 ntBASIC3.25□□□□□ -1.89
CD74P04233 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.25□□□□□ -1.89
CD74P04233 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.25□□□□□ -1.89
CD74P04233 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CD74P04233 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.25□□□□□ -1.89
CD74P04233 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.25□□□□□ -1.89
CD74P04233 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.25□□□□□ -1.89
CD74P04233 MIR4425-201ENST00000580572 84 ntBASIC3.25□□□□□ -1.89
CD74P04233 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.25□□□□□ -1.89
CD74P04233 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.25□□□□□ -1.89
CD74P04233 AC005191.1-201ENST00000603950 358 ntBASIC3.25□□□□□ -1.89
CD74P04233 AC135803.1-201ENST00000608748 565 ntBASIC3.25□□□□□ -1.89
CD74P04233 AC006338.2-201ENST00000616864 791 ntBASIC3.25□□□□□ -1.89
CD74P04233 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.25□□□□□ -1.89
CD74P04233 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CD74P04233 AL137100.1-201ENST00000556703 1620 ntBASIC3.25□□□□□ -1.89
CD74P04233 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CD74P04233 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.25□□□□□ -1.89
CD74P04233 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CD74P04233 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CD74P04233 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms