Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 RNA5SP424-201ENST00000390988 115 ntBASIC3.16□□□□□ -1.9
SPTA1P02549 BX323014.1-201ENST00000412876 237 ntBASIC3.16□□□□□ -1.9
SPTA1P02549 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.16□□□□□ -1.9
SPTA1P02549 AC069285.2-201ENST00000440210 275 ntBASIC3.16□□□□□ -1.9
SPTA1P02549 GEMIN8P3-201ENST00000445417 720 ntBASIC3.16□□□□□ -1.9
SPTA1P02549 DEFB109A-201ENST00000482450 265 ntBASIC3.16□□□□□ -1.9
SPTA1P02549 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.16□□□□□ -1.9
SPTA1P02549 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.16□□□□□ -1.9
SPTA1P02549 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.16□□□□□ -1.9
SPTA1P02549 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.16□□□□□ -1.9
SPTA1P02549 ELOCP29-201ENST00000588193 334 ntBASIC3.16□□□□□ -1.9
SPTA1P02549 AC006557.5-201ENST00000603126 811 ntBASIC3.16□□□□□ -1.9
SPTA1P02549 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.16□□□□□ -1.9
SPTA1P02549 AL359693.1-201ENST00000614959 2407 ntBASIC3.16□□□□□ -1.9
SPTA1P02549 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SPTA1P02549 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SPTA1P02549 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.16□□□□□ -1.9
SPTA1P02549 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SPTA1P02549 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SPTA1P02549 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
SPTA1P02549 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.16□□□□□ -1.9
SPTA1P02549 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.15□□□□□ -1.9
SPTA1P02549 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
SPTA1P02549 ATP5C1P1-201ENST00000441945 895 ntBASIC3.15□□□□□ -1.9
SPTA1P02549 VN1R25P-201ENST00000443385 738 ntBASIC3.15□□□□□ -1.9
SPTA1P02549 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.15□□□□□ -1.9
SPTA1P02549 VN1R40P-201ENST00000455196 941 ntBASIC3.15□□□□□ -1.9
SPTA1P02549 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.15□□□□□ -1.9
SPTA1P02549 IGKV2-26-201ENST00000518305 343 ntBASIC3.15□□□□□ -1.9
SPTA1P02549 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
SPTA1P02549 OR51C1P-201ENST00000608504 942 ntBASIC3.15□□□□□ -1.9
SPTA1P02549 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC3.15□□□□□ -1.9
SPTA1P02549 Z83843.1-201ENST00000604070 3685 ntBASIC3.15□□□□□ -1.9
SPTA1P02549 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
SPTA1P02549 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
SPTA1P02549 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
SPTA1P02549 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SPTA1P02549 MIR887-201ENST00000401258 79 ntBASIC3.15□□□□□ -1.91
SPTA1P02549 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.15□□□□□ -1.91
SPTA1P02549 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.15□□□□□ -1.91
SPTA1P02549 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SPTA1P02549 AC008011.1-201ENST00000545989 227 ntBASIC3.15□□□□□ -1.91
SPTA1P02549 AC004024.1-201ENST00000549244 247 ntBASIC3.15□□□□□ -1.91
SPTA1P02549 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.15□□□□□ -1.91
SPTA1P02549 AL034351.1-201ENST00000605288 668 ntBASIC3.15□□□□□ -1.91
SPTA1P02549 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.15□□□□□ -1.91
SPTA1P02549 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.15□□□□□ -1.91
SPTA1P02549 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC3.15□□□□□ -1.91
SPTA1P02549 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SPTA1P02549 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
SPTA1P02549 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SPTA1P02549 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
SPTA1P02549 AL353678.1-201ENST00000422735 741 ntBASIC3.14□□□□□ -1.91
SPTA1P02549 OR6K4P-201ENST00000423179 955 ntBASIC3.14□□□□□ -1.91
SPTA1P02549 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.14□□□□□ -1.91
SPTA1P02549 AL356535.1-201ENST00000440335 398 ntBASIC3.14□□□□□ -1.91
SPTA1P02549 AC010655.1-201ENST00000449336 292 ntBASIC3.14□□□□□ -1.91
SPTA1P02549 AC006480.1-201ENST00000449887 378 ntBASIC3.14□□□□□ -1.91
SPTA1P02549 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
SPTA1P02549 RNU1-41P-201ENST00000516161 162 ntBASIC3.14□□□□□ -1.91
SPTA1P02549 RN7SKP31-201ENST00000516354 278 ntBASIC3.14□□□□□ -1.91
SPTA1P02549 RNU1-48P-201ENST00000516400 162 ntBASIC3.14□□□□□ -1.91
SPTA1P02549 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.14□□□□□ -1.91
SPTA1P02549 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.14□□□□□ -1.91
SPTA1P02549 AC009097.3-201ENST00000563557 1018 ntBASIC3.14□□□□□ -1.91
SPTA1P02549 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.14□□□□□ -1.91
SPTA1P02549 AL133247.2-201ENST00000603236 482 ntBASIC3.14□□□□□ -1.91
SPTA1P02549 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC3.14□□□□□ -1.91
SPTA1P02549 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC3.14□□□□□ -1.91
SPTA1P02549 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.14□□□□□ -1.91
SPTA1P02549 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.14□□□□□ -1.91
SPTA1P02549 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
SPTA1P02549 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.14□□□□□ -1.91
SPTA1P02549 SEPT7P8-201ENST00000413308 775 ntBASIC3.14□□□□□ -1.91
SPTA1P02549 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.14□□□□□ -1.91
SPTA1P02549 MIR4319-201ENST00000577285 85 ntBASIC3.14□□□□□ -1.91
SPTA1P02549 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC3.14□□□□□ -1.91
SPTA1P02549 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SPTA1P02549 AL645937.1-201ENST00000641739 1652 ntBASIC3.14□□□□□ -1.91
SPTA1P02549 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SPTA1P02549 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.14□□□□□ -1.91
SPTA1P02549 RNU1-140P-201ENST00000365040 165 ntBASIC3.13□□□□□ -1.91
SPTA1P02549 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.13□□□□□ -1.91
SPTA1P02549 AF228730.2-201ENST00000438784 848 ntBASIC3.13□□□□□ -1.91
SPTA1P02549 AC087312.1-201ENST00000471411 480 ntBASIC3.13□□□□□ -1.91
SPTA1P02549 AC018442.3-201ENST00000523025 183 ntBASIC3.13□□□□□ -1.91
SPTA1P02549 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.13□□□□□ -1.91
SPTA1P02549 SNORD91B-202ENST00000608459 222 ntBASIC3.13□□□□□ -1.91
SPTA1P02549 AC139713.2-210ENST00000641741 992 ntBASIC3.13□□□□□ -1.91
SPTA1P02549 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SPTA1P02549 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.13□□□□□ -1.91
SPTA1P02549 AC027287.1-201ENST00000553115 1453 ntBASIC3.13□□□□□ -1.91
SPTA1P02549 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.13□□□□□ -1.91
SPTA1P02549 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
SPTA1P02549 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC3.13□□□□□ -1.91
SPTA1P02549 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SPTA1P02549 DYNLL1P7-201ENST00000429273 258 ntBASIC3.13□□□□□ -1.91
SPTA1P02549 NPM1P25-201ENST00000429734 854 ntBASIC3.13□□□□□ -1.91
SPTA1P02549 AL353705.1-201ENST00000433468 480 ntBASIC3.13□□□□□ -1.91
SPTA1P02549 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms