Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.2□□□□□ -1.74
PDGFBP01127 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.2□□□□□ -1.74
PDGFBP01127 XPOTP1-201ENST00000443317 2398 ntBASIC4.2□□□□□ -1.74
PDGFBP01127 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.2□□□□□ -1.74
PDGFBP01127 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PDGFBP01127 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PDGFBP01127 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PDGFBP01127 RNA5SP391-201ENST00000363456 119 ntBASIC4.2□□□□□ -1.74
PDGFBP01127 OR6K3-202ENST00000368146 996 ntBASIC4.2□□□□□ -1.74
PDGFBP01127 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
PDGFBP01127 RPL21P17-201ENST00000397467 475 ntBASIC4.2□□□□□ -1.74
PDGFBP01127 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.2□□□□□ -1.74
PDGFBP01127 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.2□□□□□ -1.74
PDGFBP01127 RPS29P4-201ENST00000414733 161 ntBASIC4.2□□□□□ -1.74
PDGFBP01127 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
PDGFBP01127 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.2□□□□□ -1.74
PDGFBP01127 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.2□□□□□ -1.74
PDGFBP01127 AC004448.2-201ENST00000422360 586 ntBASIC4.2□□□□□ -1.74
PDGFBP01127 MTCO2P1-201ENST00000424648 477 ntBASIC4.2□□□□□ -1.74
PDGFBP01127 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC4.2□□□□□ -1.74
PDGFBP01127 OR5BE1P-201ENST00000425977 939 ntBASIC4.2□□□□□ -1.74
PDGFBP01127 AC012497.1-201ENST00000429392 575 ntBASIC4.2□□□□□ -1.74
PDGFBP01127 RPS26P40-201ENST00000435209 294 ntBASIC4.2□□□□□ -1.74
PDGFBP01127 RPL23AP46-201ENST00000438548 490 ntBASIC4.2□□□□□ -1.74
PDGFBP01127 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.2□□□□□ -1.74
PDGFBP01127 HMGB1P48-201ENST00000446155 598 ntBASIC4.2□□□□□ -1.74
PDGFBP01127 AC068135.1-201ENST00000446164 246 ntBASIC4.2□□□□□ -1.74
PDGFBP01127 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PDGFBP01127 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PDGFBP01127 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.2□□□□□ -1.74
PDGFBP01127 RPL38P1-201ENST00000460914 211 ntBASIC4.2□□□□□ -1.74
PDGFBP01127 RPS20P21-201ENST00000466859 343 ntBASIC4.2□□□□□ -1.74
PDGFBP01127 AC018635.1-201ENST00000468292 1030 ntBASIC4.2□□□□□ -1.74
PDGFBP01127 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.2□□□□□ -1.74
PDGFBP01127 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.2□□□□□ -1.74
PDGFBP01127 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.2□□□□□ -1.74
PDGFBP01127 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.2□□□□□ -1.74
PDGFBP01127 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.2□□□□□ -1.74
PDGFBP01127 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.2□□□□□ -1.74
PDGFBP01127 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.2□□□□□ -1.74
PDGFBP01127 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.2□□□□□ -1.74
PDGFBP01127 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.2□□□□□ -1.74
PDGFBP01127 AL352979.3-201ENST00000553515 247 ntBASIC4.2□□□□□ -1.74
PDGFBP01127 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.2□□□□□ -1.74
PDGFBP01127 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.2□□□□□ -1.74
PDGFBP01127 AC091178.1-203ENST00000584586 279 ntBASIC4.2□□□□□ -1.74
PDGFBP01127 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.2□□□□□ -1.74
PDGFBP01127 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.2□□□□□ -1.74
PDGFBP01127 Z98200.1-201ENST00000607298 470 ntBASIC4.2□□□□□ -1.74
PDGFBP01127 AC084824.5-201ENST00000612009 413 ntBASIC4.2□□□□□ -1.74
PDGFBP01127 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.2□□□□□ -1.74
PDGFBP01127 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.2□□□□□ -1.74
PDGFBP01127 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
PDGFBP01127 AC080188.3-201ENST00000624842 748 ntBASIC4.2□□□□□ -1.74
PDGFBP01127 OR5BE1P-202ENST00000641168 1176 ntBASIC4.2□□□□□ -1.74
PDGFBP01127 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PDGFBP01127 AC119744.1-201ENST00000454746 1715 ntBASIC4.2□□□□□ -1.74
PDGFBP01127 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.2□□□□□ -1.74
PDGFBP01127 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.2□□□□□ -1.74
PDGFBP01127 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.2□□□□□ -1.74
PDGFBP01127 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.2□□□□□ -1.74
PDGFBP01127 AC116667.1-201ENST00000604855 2072 ntBASIC4.2□□□□□ -1.74
PDGFBP01127 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.2□□□□□ -1.74
PDGFBP01127 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PDGFBP01127 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
PDGFBP01127 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
PDGFBP01127 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
PDGFBP01127 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.19□□□□□ -1.74
PDGFBP01127 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PDGFBP01127 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PDGFBP01127 OR56B2P-201ENST00000317102 954 ntBASIC4.19□□□□□ -1.74
PDGFBP01127 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
PDGFBP01127 RNA5SP151-201ENST00000365632 117 ntBASIC4.19□□□□□ -1.74
PDGFBP01127 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
PDGFBP01127 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PDGFBP01127 RNU6-1005P-201ENST00000384519 107 ntBASIC4.19□□□□□ -1.74
PDGFBP01127 MIR124-3-201ENST00000384866 87 ntBASIC4.19□□□□□ -1.74
PDGFBP01127 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.19□□□□□ -1.74
PDGFBP01127 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.19□□□□□ -1.74
PDGFBP01127 ATF1P1-201ENST00000406040 927 ntBASIC4.19□□□□□ -1.74
PDGFBP01127 AC092745.2-202ENST00000411880 369 ntBASIC4.19□□□□□ -1.74
PDGFBP01127 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.19□□□□□ -1.74
PDGFBP01127 HMGB3P31-201ENST00000413333 595 ntBASIC4.19□□□□□ -1.74
PDGFBP01127 PRELID3BP11-201ENST00000414230 479 ntBASIC4.19□□□□□ -1.74
PDGFBP01127 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.19□□□□□ -1.74
PDGFBP01127 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.19□□□□□ -1.74
PDGFBP01127 AC023128.2-201ENST00000420880 1223 ntBASIC4.19□□□□□ -1.74
PDGFBP01127 RPS12P5-201ENST00000423449 371 ntBASIC4.19□□□□□ -1.74
PDGFBP01127 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.19□□□□□ -1.74
PDGFBP01127 ETF1P3-201ENST00000430422 1160 ntBASIC4.19□□□□□ -1.74
PDGFBP01127 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.19□□□□□ -1.74
PDGFBP01127 AC104306.1-201ENST00000449702 371 ntBASIC4.19□□□□□ -1.74
PDGFBP01127 DDX39BP2-208ENST00000453923 258 ntBASIC4.19□□□□□ -1.74
PDGFBP01127 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.19□□□□□ -1.74
PDGFBP01127 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.19□□□□□ -1.74
PDGFBP01127 RN7SL293P-201ENST00000481765 281 ntBASIC4.19□□□□□ -1.74
PDGFBP01127 AC012170.1-201ENST00000495139 359 ntBASIC4.19□□□□□ -1.74
PDGFBP01127 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.19□□□□□ -1.74
PDGFBP01127 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.19□□□□□ -1.74
PDGFBP01127 ARL4AP1-201ENST00000503220 705 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms