Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.75□□□□□ -1.65
VPS4AQ9UN37 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.75□□□□□ -1.65
VPS4AQ9UN37 NCSTNP1-201ENST00000406229 144 ntBASIC4.75□□□□□ -1.65
VPS4AQ9UN37 RN7SKP182-201ENST00000410772 298 ntBASIC4.75□□□□□ -1.65
VPS4AQ9UN37 AC004690.1-201ENST00000418216 328 ntBASIC4.75□□□□□ -1.65
VPS4AQ9UN37 AC099336.2-201ENST00000422457 254 ntBASIC4.75□□□□□ -1.65
VPS4AQ9UN37 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.75□□□□□ -1.65
VPS4AQ9UN37 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.75□□□□□ -1.65
VPS4AQ9UN37 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.75□□□□□ -1.65
VPS4AQ9UN37 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.75□□□□□ -1.65
VPS4AQ9UN37 AL050321.1-201ENST00000432363 400 ntBASIC4.75□□□□□ -1.65
VPS4AQ9UN37 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.75□□□□□ -1.65
VPS4AQ9UN37 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.75□□□□□ -1.65
VPS4AQ9UN37 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.75□□□□□ -1.65
VPS4AQ9UN37 AL034418.1-201ENST00000448675 860 ntBASIC4.75□□□□□ -1.65
VPS4AQ9UN37 AC073264.2-201ENST00000448886 166 ntBASIC4.75□□□□□ -1.65
VPS4AQ9UN37 AL691482.1-201ENST00000453255 87 ntBASIC4.75□□□□□ -1.65
VPS4AQ9UN37 RPL37P3-201ENST00000456825 293 ntBASIC4.75□□□□□ -1.65
VPS4AQ9UN37 AC099560.2-201ENST00000457554 255 ntBASIC4.75□□□□□ -1.65
VPS4AQ9UN37 RPL31P3-201ENST00000458430 332 ntBASIC4.75□□□□□ -1.65
VPS4AQ9UN37 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.75□□□□□ -1.65
VPS4AQ9UN37 RPL30P6-201ENST00000475925 342 ntBASIC4.75□□□□□ -1.65
VPS4AQ9UN37 HMGN2P25-201ENST00000486956 268 ntBASIC4.75□□□□□ -1.65
VPS4AQ9UN37 UBA52P3-201ENST00000491303 382 ntBASIC4.75□□□□□ -1.65
VPS4AQ9UN37 RN7SL244P-201ENST00000493405 297 ntBASIC4.75□□□□□ -1.65
VPS4AQ9UN37 OR2A20P-203ENST00000498397 1268 ntBASIC4.75□□□□□ -1.65
VPS4AQ9UN37 AC140172.1-201ENST00000502928 141 ntBASIC4.75□□□□□ -1.65
VPS4AQ9UN37 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.75□□□□□ -1.65
VPS4AQ9UN37 AC147055.4-201ENST00000504399 745 ntBASIC4.75□□□□□ -1.65
VPS4AQ9UN37 HSPE1P23-201ENST00000509838 286 ntBASIC4.75□□□□□ -1.65
VPS4AQ9UN37 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.75□□□□□ -1.65
VPS4AQ9UN37 ENPP7P9-201ENST00000514456 627 ntBASIC4.75□□□□□ -1.65
VPS4AQ9UN37 RNU6-759P-201ENST00000516740 103 ntBASIC4.75□□□□□ -1.65
VPS4AQ9UN37 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC4.75□□□□□ -1.65
VPS4AQ9UN37 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.75□□□□□ -1.65
VPS4AQ9UN37 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.75□□□□□ -1.65
VPS4AQ9UN37 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VPS4AQ9UN37 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.75□□□□□ -1.65
VPS4AQ9UN37 MIR4737-201ENST00000583979 81 ntBASIC4.75□□□□□ -1.65
VPS4AQ9UN37 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.75□□□□□ -1.65
VPS4AQ9UN37 AC103881.1-201ENST00000603476 538 ntBASIC4.75□□□□□ -1.65
VPS4AQ9UN37 AC131235.4-201ENST00000609288 620 ntBASIC4.75□□□□□ -1.65
VPS4AQ9UN37 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.75□□□□□ -1.65
VPS4AQ9UN37 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.75□□□□□ -1.65
VPS4AQ9UN37 MIR6758-201ENST00000620653 63 ntBASIC4.75□□□□□ -1.65
VPS4AQ9UN37 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
VPS4AQ9UN37 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VPS4AQ9UN37 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.75□□□□□ -1.65
VPS4AQ9UN37 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
VPS4AQ9UN37 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
VPS4AQ9UN37 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS4AQ9UN37 AL672167.1-203ENST00000641299 2975 ntBASIC4.75□□□□□ -1.65
VPS4AQ9UN37 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VPS4AQ9UN37 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS4AQ9UN37 ELL2P3-201ENST00000457883 1602 ntBASIC4.75□□□□□ -1.65
VPS4AQ9UN37 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.75□□□□□ -1.65
VPS4AQ9UN37 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.74□□□□□ -1.65
VPS4AQ9UN37 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.74□□□□□ -1.65
VPS4AQ9UN37 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VPS4AQ9UN37 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
VPS4AQ9UN37 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.74□□□□□ -1.65
VPS4AQ9UN37 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
VPS4AQ9UN37 RN7SKP95-201ENST00000362860 303 ntBASIC4.74□□□□□ -1.65
VPS4AQ9UN37 Y_RNA.201-201ENST00000364052 96 ntBASIC4.74□□□□□ -1.65
VPS4AQ9UN37 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
VPS4AQ9UN37 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
VPS4AQ9UN37 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
VPS4AQ9UN37 AL139098.1-201ENST00000407291 389 ntBASIC4.74□□□□□ -1.65
VPS4AQ9UN37 RN7SKP114-201ENST00000410327 279 ntBASIC4.74□□□□□ -1.65
VPS4AQ9UN37 ZNF885P-201ENST00000420174 1098 ntBASIC4.74□□□□□ -1.65
VPS4AQ9UN37 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.74□□□□□ -1.65
VPS4AQ9UN37 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.74□□□□□ -1.65
VPS4AQ9UN37 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.74□□□□□ -1.65
VPS4AQ9UN37 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.74□□□□□ -1.65
VPS4AQ9UN37 BX323845.1-201ENST00000432417 179 ntBASIC4.74□□□□□ -1.65
VPS4AQ9UN37 PPIAP13-201ENST00000434706 478 ntBASIC4.74□□□□□ -1.65
VPS4AQ9UN37 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.74□□□□□ -1.65
VPS4AQ9UN37 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.74□□□□□ -1.65
VPS4AQ9UN37 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.74□□□□□ -1.65
VPS4AQ9UN37 AL450023.3-201ENST00000440592 271 ntBASIC4.74□□□□□ -1.65
VPS4AQ9UN37 RPL7P59-201ENST00000447700 943 ntBASIC4.74□□□□□ -1.65
VPS4AQ9UN37 AL354710.1-201ENST00000453641 246 ntBASIC4.74□□□□□ -1.65
VPS4AQ9UN37 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.74□□□□□ -1.65
VPS4AQ9UN37 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
VPS4AQ9UN37 OR7H2P-201ENST00000513483 306 ntBASIC4.74□□□□□ -1.65
VPS4AQ9UN37 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.74□□□□□ -1.65
VPS4AQ9UN37 AC117532.1-201ENST00000514638 323 ntBASIC4.74□□□□□ -1.65
VPS4AQ9UN37 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.74□□□□□ -1.65
VPS4AQ9UN37 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.74□□□□□ -1.65
VPS4AQ9UN37 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC4.74□□□□□ -1.65
VPS4AQ9UN37 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.74□□□□□ -1.65
VPS4AQ9UN37 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.74□□□□□ -1.65
VPS4AQ9UN37 AC107918.3-201ENST00000533272 382 ntBASIC4.74□□□□□ -1.65
VPS4AQ9UN37 GTF2IP8-201ENST00000560687 584 ntBASIC4.74□□□□□ -1.65
VPS4AQ9UN37 BGLT3-201ENST00000564523 994 ntBASIC4.74□□□□□ -1.65
VPS4AQ9UN37 UBE2FP2-201ENST00000566646 462 ntBASIC4.74□□□□□ -1.65
VPS4AQ9UN37 AC209154.1-201ENST00000582156 337 ntBASIC4.74□□□□□ -1.65
VPS4AQ9UN37 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC4.74□□□□□ -1.65
VPS4AQ9UN37 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.74□□□□□ -1.65
VPS4AQ9UN37 AC068790.4-201ENST00000602474 263 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms