Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 RPL7P44-201ENST00000424827 742 ntBASIC5.01□□□□□ -1.61
DKK3Q9UBP4 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.01□□□□□ -1.61
DKK3Q9UBP4 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.01□□□□□ -1.61
DKK3Q9UBP4 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.01□□□□□ -1.61
DKK3Q9UBP4 RPL7AP61-201ENST00000443410 636 ntBASIC5.01□□□□□ -1.61
DKK3Q9UBP4 TPT1P12-201ENST00000448968 492 ntBASIC5.01□□□□□ -1.61
DKK3Q9UBP4 RFC5P1-201ENST00000454419 874 ntBASIC5.01□□□□□ -1.61
DKK3Q9UBP4 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.01□□□□□ -1.61
DKK3Q9UBP4 RPL7AP52-201ENST00000458096 790 ntBASIC5.01□□□□□ -1.61
DKK3Q9UBP4 RPS3AP41-201ENST00000462701 778 ntBASIC5.01□□□□□ -1.61
DKK3Q9UBP4 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.01□□□□□ -1.61
DKK3Q9UBP4 VPS26AP1-201ENST00000483197 979 ntBASIC5.01□□□□□ -1.61
DKK3Q9UBP4 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.01□□□□□ -1.61
DKK3Q9UBP4 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.01□□□□□ -1.61
DKK3Q9UBP4 GAPDHP56-201ENST00000506031 988 ntBASIC5.01□□□□□ -1.61
DKK3Q9UBP4 MRPS33P2-201ENST00000507850 322 ntBASIC5.01□□□□□ -1.61
DKK3Q9UBP4 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.01□□□□□ -1.61
DKK3Q9UBP4 AC010587.2-201ENST00000511727 448 ntBASIC5.01□□□□□ -1.61
DKK3Q9UBP4 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.01□□□□□ -1.61
DKK3Q9UBP4 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
DKK3Q9UBP4 RNU6-416P-201ENST00000516265 103 ntBASIC5.01□□□□□ -1.61
DKK3Q9UBP4 RNU6-347P-201ENST00000516658 105 ntBASIC5.01□□□□□ -1.61
DKK3Q9UBP4 RAB9BP1-201ENST00000519581 626 ntBASIC5.01□□□□□ -1.61
DKK3Q9UBP4 AC021006.3-201ENST00000530771 192 ntBASIC5.01□□□□□ -1.61
DKK3Q9UBP4 OR4C2P-201ENST00000530855 1064 ntBASIC5.01□□□□□ -1.61
DKK3Q9UBP4 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.01□□□□□ -1.61
DKK3Q9UBP4 AL121766.1-201ENST00000547436 487 ntBASIC5.01□□□□□ -1.61
DKK3Q9UBP4 POLR2KP1-201ENST00000553226 168 ntBASIC5.01□□□□□ -1.61
DKK3Q9UBP4 BGLT3-201ENST00000564523 994 ntBASIC5.01□□□□□ -1.61
DKK3Q9UBP4 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC5.01□□□□□ -1.61
DKK3Q9UBP4 AC008759.1-201ENST00000589783 983 ntBASIC5.01□□□□□ -1.61
DKK3Q9UBP4 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.01□□□□□ -1.61
DKK3Q9UBP4 AC004987.4-201ENST00000603383 338 ntBASIC5.01□□□□□ -1.61
DKK3Q9UBP4 AC010200.2-201ENST00000605098 235 ntBASIC5.01□□□□□ -1.61
DKK3Q9UBP4 AC103591.3-201ENST00000608684 209 ntBASIC5.01□□□□□ -1.61
DKK3Q9UBP4 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC5.01□□□□□ -1.61
DKK3Q9UBP4 AC087385.3-201ENST00000620477 187 ntBASIC5.01□□□□□ -1.61
DKK3Q9UBP4 AP006248.2-201ENST00000623309 592 ntBASIC5.01□□□□□ -1.61
DKK3Q9UBP4 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC5.01□□□□□ -1.61
DKK3Q9UBP4 PHKBP1-201ENST00000450951 1951 ntBASIC5.01□□□□□ -1.61
DKK3Q9UBP4 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
DKK3Q9UBP4 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.01□□□□□ -1.61
DKK3Q9UBP4 AC025263.3-201ENST00000622965 1396 ntBASIC5.01□□□□□ -1.61
DKK3Q9UBP4 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
DKK3Q9UBP4 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
DKK3Q9UBP4 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
DKK3Q9UBP4 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5□□□□□ -1.61
DKK3Q9UBP4 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5□□□□□ -1.61
DKK3Q9UBP4 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
DKK3Q9UBP4 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
DKK3Q9UBP4 AL049555.1-201ENST00000562834 1933 ntBASIC5□□□□□ -1.61
DKK3Q9UBP4 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5□□□□□ -1.61
DKK3Q9UBP4 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
DKK3Q9UBP4 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5□□□□□ -1.61
DKK3Q9UBP4 SNORA70.10-201ENST00000384515 134 ntBASIC5□□□□□ -1.61
DKK3Q9UBP4 Y_RNA.560-201ENST00000384689 102 ntBASIC5□□□□□ -1.61
DKK3Q9UBP4 RPL21P67-201ENST00000402896 478 ntBASIC5□□□□□ -1.61
DKK3Q9UBP4 MRPS36P1-201ENST00000421291 307 ntBASIC5□□□□□ -1.61
DKK3Q9UBP4 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5□□□□□ -1.61
DKK3Q9UBP4 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5□□□□□ -1.61
DKK3Q9UBP4 BLOC1S2P1-201ENST00000428431 301 ntBASIC5□□□□□ -1.61
DKK3Q9UBP4 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5□□□□□ -1.61
DKK3Q9UBP4 AL049745.1-201ENST00000433953 286 ntBASIC5□□□□□ -1.61
DKK3Q9UBP4 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC5□□□□□ -1.61
DKK3Q9UBP4 AC112498.1-201ENST00000444401 332 ntBASIC5□□□□□ -1.61
DKK3Q9UBP4 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5□□□□□ -1.61
DKK3Q9UBP4 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5□□□□□ -1.61
DKK3Q9UBP4 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC5□□□□□ -1.61
DKK3Q9UBP4 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5□□□□□ -1.61
DKK3Q9UBP4 BX248409.1-201ENST00000455497 255 ntBASIC5□□□□□ -1.61
DKK3Q9UBP4 RPS17P2-201ENST00000461663 408 ntBASIC5□□□□□ -1.61
DKK3Q9UBP4 RPL7P1-201ENST00000468161 747 ntBASIC5□□□□□ -1.61
DKK3Q9UBP4 RPL7P9-201ENST00000468715 747 ntBASIC5□□□□□ -1.61
DKK3Q9UBP4 RN7SL385P-201ENST00000468873 276 ntBASIC5□□□□□ -1.61
DKK3Q9UBP4 RN7SL738P-201ENST00000470264 297 ntBASIC5□□□□□ -1.61
DKK3Q9UBP4 AC104689.1-201ENST00000473356 768 ntBASIC5□□□□□ -1.61
DKK3Q9UBP4 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5□□□□□ -1.61
DKK3Q9UBP4 RPS6P4-201ENST00000494693 758 ntBASIC5□□□□□ -1.61
DKK3Q9UBP4 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5□□□□□ -1.61
DKK3Q9UBP4 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5□□□□□ -1.61
DKK3Q9UBP4 DSTNP2-201ENST00000504533 515 ntBASIC5□□□□□ -1.61
DKK3Q9UBP4 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5□□□□□ -1.61
DKK3Q9UBP4 AC010625.1-201ENST00000511296 403 ntBASIC5□□□□□ -1.61
DKK3Q9UBP4 BTF3P13-201ENST00000513224 490 ntBASIC5□□□□□ -1.61
DKK3Q9UBP4 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5□□□□□ -1.61
DKK3Q9UBP4 AC134698.5-201ENST00000519444 336 ntBASIC5□□□□□ -1.61
DKK3Q9UBP4 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5□□□□□ -1.61
DKK3Q9UBP4 SMARCE1P4-201ENST00000523647 241 ntBASIC5□□□□□ -1.61
DKK3Q9UBP4 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5□□□□□ -1.61
DKK3Q9UBP4 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC5□□□□□ -1.61
DKK3Q9UBP4 AC027807.1-201ENST00000559921 996 ntBASIC5□□□□□ -1.61
DKK3Q9UBP4 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5□□□□□ -1.61
DKK3Q9UBP4 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC5□□□□□ -1.61
DKK3Q9UBP4 AK6-205ENST00000618980 483 ntTSL 2 BASIC5□□□□□ -1.61
DKK3Q9UBP4 AC092656.1-203ENST00000624134 423 ntBASIC5□□□□□ -1.61
DKK3Q9UBP4 CR381572.2-201ENST00000624852 397 ntBASIC5□□□□□ -1.61
DKK3Q9UBP4 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC5□□□□□ -1.61
DKK3Q9UBP4 AL355852.1-201ENST00000454081 1771 ntBASIC5□□□□□ -1.61
DKK3Q9UBP4 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5□□□□□ -1.61
DKK3Q9UBP4 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms