Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 RNU1-122P-201ENST00000365538 156 ntBASIC8.36□□□□□ -1.07
RTN4Q9NQC3 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
RTN4Q9NQC3 IARS-201ENST00000375627 697 ntTSL 3 BASIC8.36□□□□□ -1.07
RTN4Q9NQC3 RNA5SP176-201ENST00000390956 110 ntBASIC8.36□□□□□ -1.07
RTN4Q9NQC3 AC097374.1-203ENST00000400783 485 ntBASIC8.36□□□□□ -1.07
RTN4Q9NQC3 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC8.36□□□□□ -1.07
RTN4Q9NQC3 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC8.36□□□□□ -1.07
RTN4Q9NQC3 AL356387.1-201ENST00000426321 476 ntTSL 3 BASIC8.36□□□□□ -1.07
RTN4Q9NQC3 RPL3P8-201ENST00000432928 1191 ntBASIC8.36□□□□□ -1.07
RTN4Q9NQC3 RPS3AP52-201ENST00000435639 297 ntBASIC8.36□□□□□ -1.07
RTN4Q9NQC3 AC016734.1-201ENST00000436998 654 ntBASIC8.36□□□□□ -1.07
RTN4Q9NQC3 AC073109.1-201ENST00000445066 978 ntBASIC8.36□□□□□ -1.07
RTN4Q9NQC3 AL139237.1-201ENST00000446107 513 ntTSL 2 BASIC8.36□□□□□ -1.07
RTN4Q9NQC3 AL031736.1-201ENST00000449688 618 ntBASIC8.36□□□□□ -1.07
RTN4Q9NQC3 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC8.36□□□□□ -1.07
RTN4Q9NQC3 AL133445.1-201ENST00000467051 452 ntBASIC8.36□□□□□ -1.07
RTN4Q9NQC3 DYNLL1P5-201ENST00000467158 270 ntBASIC8.36□□□□□ -1.07
RTN4Q9NQC3 AC090096.1-201ENST00000489168 390 ntBASIC8.36□□□□□ -1.07
RTN4Q9NQC3 AP001086.1-201ENST00000494882 321 ntBASIC8.36□□□□□ -1.07
RTN4Q9NQC3 RPS27P27-201ENST00000498779 255 ntBASIC8.36□□□□□ -1.07
RTN4Q9NQC3 MTND5P5-201ENST00000503764 376 ntBASIC8.36□□□□□ -1.07
RTN4Q9NQC3 RNU6-327P-201ENST00000516270 127 ntBASIC8.36□□□□□ -1.07
RTN4Q9NQC3 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC8.36□□□□□ -1.07
RTN4Q9NQC3 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC8.36□□□□□ -1.07
RTN4Q9NQC3 AC138761.3-201ENST00000579993 334 ntBASIC8.36□□□□□ -1.07
RTN4Q9NQC3 MIR4682-201ENST00000580643 80 ntBASIC8.36□□□□□ -1.07
RTN4Q9NQC3 MIR3672-201ENST00000584290 82 ntBASIC8.36□□□□□ -1.07
RTN4Q9NQC3 AC006547.1-208ENST00000598339 805 ntTSL 5 BASIC8.36□□□□□ -1.07
RTN4Q9NQC3 AL021808.1-201ENST00000604325 1117 ntBASIC8.36□□□□□ -1.07
RTN4Q9NQC3 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC8.36□□□□□ -1.07
RTN4Q9NQC3 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC8.36□□□□□ -1.07
RTN4Q9NQC3 MIR3120-201ENST00000636555 81 ntBASIC8.36□□□□□ -1.07
RTN4Q9NQC3 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
RTN4Q9NQC3 AC012618.3-205ENST00000637896 1496 ntBASIC8.36□□□□□ -1.07
RTN4Q9NQC3 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
RTN4Q9NQC3 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
RTN4Q9NQC3 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
RTN4Q9NQC3 LDHAL6CP-202ENST00000550738 3224 ntBASIC8.36□□□□□ -1.07
RTN4Q9NQC3 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
RTN4Q9NQC3 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
RTN4Q9NQC3 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC8.36□□□□□ -1.07
RTN4Q9NQC3 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
RTN4Q9NQC3 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
RTN4Q9NQC3 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC8.36□□□□□ -1.07
RTN4Q9NQC3 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
RTN4Q9NQC3 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
RTN4Q9NQC3 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
RTN4Q9NQC3 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
RTN4Q9NQC3 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC8.35□□□□□ -1.07
RTN4Q9NQC3 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
RTN4Q9NQC3 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
RTN4Q9NQC3 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
RTN4Q9NQC3 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
RTN4Q9NQC3 SNORA68-201ENST00000384437 133 ntBASIC8.35□□□□□ -1.07
RTN4Q9NQC3 ISY1-202ENST00000393292 988 ntTSL 5 BASIC8.35□□□□□ -1.07
RTN4Q9NQC3 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
RTN4Q9NQC3 RPL24-201ENST00000394077 623 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RTN4Q9NQC3 AL121834.1-202ENST00000404494 277 ntBASIC8.35□□□□□ -1.07
RTN4Q9NQC3 VDAC1P9-201ENST00000412766 841 ntBASIC8.35□□□□□ -1.07
RTN4Q9NQC3 AL590682.1-201ENST00000437248 344 ntBASIC8.35□□□□□ -1.07
RTN4Q9NQC3 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC8.35□□□□□ -1.07
RTN4Q9NQC3 AC034238.2-201ENST00000445660 567 ntTSL 4 BASIC8.35□□□□□ -1.07
RTN4Q9NQC3 SAP18P3-201ENST00000449663 396 ntBASIC8.35□□□□□ -1.07
RTN4Q9NQC3 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC8.35□□□□□ -1.07
RTN4Q9NQC3 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC8.35□□□□□ -1.07
RTN4Q9NQC3 AC080129.1-201ENST00000457815 406 ntTSL 3 BASIC8.35□□□□□ -1.07
RTN4Q9NQC3 RN7SL571P-201ENST00000468302 295 ntBASIC8.35□□□□□ -1.07
RTN4Q9NQC3 RN7SL751P-201ENST00000473281 284 ntBASIC8.35□□□□□ -1.07
RTN4Q9NQC3 AC027575.1-201ENST00000481064 460 ntBASIC8.35□□□□□ -1.07
RTN4Q9NQC3 RN7SL201P-201ENST00000482306 296 ntBASIC8.35□□□□□ -1.07
RTN4Q9NQC3 AL355076.1-201ENST00000484315 270 ntBASIC8.35□□□□□ -1.07
RTN4Q9NQC3 AP002812.1-201ENST00000495378 474 ntBASIC8.35□□□□□ -1.07
RTN4Q9NQC3 B3GNTL1P1-201ENST00000509174 289 ntBASIC8.35□□□□□ -1.07
RTN4Q9NQC3 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC8.35□□□□□ -1.07
RTN4Q9NQC3 SNORA31.3-201ENST00000516029 96 ntBASIC8.35□□□□□ -1.07
RTN4Q9NQC3 SNORA14.1-201ENST00000516113 141 ntBASIC8.35□□□□□ -1.07
RTN4Q9NQC3 RN7SKP70-201ENST00000516655 271 ntBASIC8.35□□□□□ -1.07
RTN4Q9NQC3 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC8.35□□□□□ -1.07
RTN4Q9NQC3 ERLIN2-210ENST00000523107 771 ntTSL 3 BASIC8.35□□□□□ -1.07
RTN4Q9NQC3 AP004833.3-201ENST00000531893 322 ntBASIC8.35□□□□□ -1.07
RTN4Q9NQC3 AC092868.1-201ENST00000557949 802 ntBASIC8.35□□□□□ -1.07
RTN4Q9NQC3 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC8.35□□□□□ -1.07
RTN4Q9NQC3 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC8.35□□□□□ -1.07
RTN4Q9NQC3 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
RTN4Q9NQC3 AC233702.2-201ENST00000618784 583 ntTSL 4 BASIC8.35□□□□□ -1.07
RTN4Q9NQC3 MTND4LP32-201ENST00000636111 270 ntBASIC8.35□□□□□ -1.07
RTN4Q9NQC3 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RTN4Q9NQC3 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC8.35□□□□□ -1.07
RTN4Q9NQC3 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
RTN4Q9NQC3 AL391380.1-201ENST00000439300 1432 ntBASIC8.35□□□□□ -1.07
RTN4Q9NQC3 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC8.35□□□□□ -1.07
RTN4Q9NQC3 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
RTN4Q9NQC3 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC8.35□□□□□ -1.07
RTN4Q9NQC3 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC8.35□□□□□ -1.07
RTN4Q9NQC3 AC099654.2-201ENST00000433031 1980 ntBASIC8.35□□□□□ -1.07
RTN4Q9NQC3 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RTN4Q9NQC3 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RTN4Q9NQC3 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC8.34□□□□□ -1.07
RTN4Q9NQC3 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
RTN4Q9NQC3 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms