Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 RNU6-553P-201ENST00000364047 96 ntBASIC4.85□□□□□ -1.63
USP29Q9HBJ7 AL590290.1-201ENST00000405336 380 ntBASIC4.85□□□□□ -1.63
USP29Q9HBJ7 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.85□□□□□ -1.63
USP29Q9HBJ7 AC004690.1-201ENST00000418216 328 ntBASIC4.85□□□□□ -1.63
USP29Q9HBJ7 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.85□□□□□ -1.63
USP29Q9HBJ7 Z93242.1-201ENST00000427102 353 ntBASIC4.85□□□□□ -1.63
USP29Q9HBJ7 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.85□□□□□ -1.63
USP29Q9HBJ7 AC093155.1-201ENST00000440164 826 ntBASIC4.85□□□□□ -1.63
USP29Q9HBJ7 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
USP29Q9HBJ7 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.85□□□□□ -1.63
USP29Q9HBJ7 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.85□□□□□ -1.63
USP29Q9HBJ7 AC104306.1-201ENST00000449702 371 ntBASIC4.85□□□□□ -1.63
USP29Q9HBJ7 AC010733.1-201ENST00000451515 401 ntBASIC4.85□□□□□ -1.63
USP29Q9HBJ7 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.85□□□□□ -1.63
USP29Q9HBJ7 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.85□□□□□ -1.63
USP29Q9HBJ7 AC005229.2-201ENST00000456995 399 ntBASIC4.85□□□□□ -1.63
USP29Q9HBJ7 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.85□□□□□ -1.63
USP29Q9HBJ7 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.85□□□□□ -1.63
USP29Q9HBJ7 RN7SL809P-201ENST00000482040 297 ntBASIC4.85□□□□□ -1.63
USP29Q9HBJ7 VPS26AP1-201ENST00000483197 979 ntBASIC4.85□□□□□ -1.63
USP29Q9HBJ7 AC093267.1-201ENST00000489176 961 ntBASIC4.85□□□□□ -1.63
USP29Q9HBJ7 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.85□□□□□ -1.63
USP29Q9HBJ7 SCARNA22-201ENST00000503991 125 ntBASIC4.85□□□□□ -1.63
USP29Q9HBJ7 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.85□□□□□ -1.63
USP29Q9HBJ7 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4.85□□□□□ -1.63
USP29Q9HBJ7 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.85□□□□□ -1.63
USP29Q9HBJ7 AC087808.1-201ENST00000520501 361 ntBASIC4.85□□□□□ -1.63
USP29Q9HBJ7 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC4.85□□□□□ -1.63
USP29Q9HBJ7 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC4.85□□□□□ -1.63
USP29Q9HBJ7 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.85□□□□□ -1.63
USP29Q9HBJ7 AC005951.1-201ENST00000576706 485 ntBASIC4.85□□□□□ -1.63
USP29Q9HBJ7 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.85□□□□□ -1.63
USP29Q9HBJ7 VN1R84P-201ENST00000593697 235 ntBASIC4.85□□□□□ -1.63
USP29Q9HBJ7 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.85□□□□□ -1.63
USP29Q9HBJ7 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
USP29Q9HBJ7 COX6CP4-201ENST00000605798 228 ntBASIC4.85□□□□□ -1.63
USP29Q9HBJ7 OR2AS2P-201ENST00000606902 342 ntBASIC4.85□□□□□ -1.63
USP29Q9HBJ7 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.85□□□□□ -1.63
USP29Q9HBJ7 AP004247.3-201ENST00000608682 624 ntBASIC4.85□□□□□ -1.63
USP29Q9HBJ7 AC097505.1-201ENST00000610199 565 ntBASIC4.85□□□□□ -1.63
USP29Q9HBJ7 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.85□□□□□ -1.63
USP29Q9HBJ7 AC121761.2-201ENST00000617300 689 ntBASIC4.85□□□□□ -1.63
USP29Q9HBJ7 AC018926.3-201ENST00000618841 406 ntBASIC4.85□□□□□ -1.63
USP29Q9HBJ7 AL731566.2-201ENST00000618971 317 ntBASIC4.85□□□□□ -1.63
USP29Q9HBJ7 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.85□□□□□ -1.63
USP29Q9HBJ7 AC010608.2-201ENST00000624830 470 ntBASIC4.85□□□□□ -1.63
USP29Q9HBJ7 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.85□□□□□ -1.63
USP29Q9HBJ7 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.85□□□□□ -1.63
USP29Q9HBJ7 SAMMSON-226ENST00000642089 1582 ntBASIC4.85□□□□□ -1.63
USP29Q9HBJ7 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
USP29Q9HBJ7 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
USP29Q9HBJ7 AL031119.1-201ENST00000404707 1879 ntBASIC4.85□□□□□ -1.63
USP29Q9HBJ7 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
USP29Q9HBJ7 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
USP29Q9HBJ7 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
USP29Q9HBJ7 ZFRP1-201ENST00000457579 2970 ntBASIC4.85□□□□□ -1.63
USP29Q9HBJ7 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
USP29Q9HBJ7 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
USP29Q9HBJ7 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
USP29Q9HBJ7 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
USP29Q9HBJ7 AC046144.1-201ENST00000478559 1853 ntBASIC4.84□□□□□ -1.63
USP29Q9HBJ7 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
USP29Q9HBJ7 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
USP29Q9HBJ7 AC109315.1-201ENST00000584143 1347 ntBASIC4.84□□□□□ -1.63
USP29Q9HBJ7 HMGB1P5-201ENST00000255320 642 ntBASIC4.84□□□□□ -1.63
USP29Q9HBJ7 SNORA62-201ENST00000365493 153 ntBASIC4.84□□□□□ -1.63
USP29Q9HBJ7 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.84□□□□□ -1.63
USP29Q9HBJ7 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
USP29Q9HBJ7 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
USP29Q9HBJ7 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
USP29Q9HBJ7 RNU1-82P-201ENST00000390851 165 ntBASIC4.84□□□□□ -1.63
USP29Q9HBJ7 RPS24P12-201ENST00000402084 394 ntBASIC4.84□□□□□ -1.63
USP29Q9HBJ7 HNRNPDP2-201ENST00000406475 478 ntBASIC4.84□□□□□ -1.63
USP29Q9HBJ7 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.84□□□□□ -1.63
USP29Q9HBJ7 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.84□□□□□ -1.63
USP29Q9HBJ7 AL161449.1-201ENST00000414531 1199 ntBASIC4.84□□□□□ -1.63
USP29Q9HBJ7 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.84□□□□□ -1.63
USP29Q9HBJ7 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.84□□□□□ -1.63
USP29Q9HBJ7 MRPS36P1-201ENST00000421291 307 ntBASIC4.84□□□□□ -1.63
USP29Q9HBJ7 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.84□□□□□ -1.63
USP29Q9HBJ7 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.84□□□□□ -1.63
USP29Q9HBJ7 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.84□□□□□ -1.63
USP29Q9HBJ7 OR2B7P-201ENST00000429302 934 ntBASIC4.84□□□□□ -1.63
USP29Q9HBJ7 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.84□□□□□ -1.63
USP29Q9HBJ7 AC068287.1-201ENST00000430283 295 ntBASIC4.84□□□□□ -1.63
USP29Q9HBJ7 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.84□□□□□ -1.63
USP29Q9HBJ7 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.84□□□□□ -1.63
USP29Q9HBJ7 AL354941.1-201ENST00000438600 464 ntBASIC4.84□□□□□ -1.63
USP29Q9HBJ7 CBX1P4-201ENST00000439415 457 ntBASIC4.84□□□□□ -1.63
USP29Q9HBJ7 MTCO2P25-201ENST00000447065 681 ntBASIC4.84□□□□□ -1.63
USP29Q9HBJ7 AC073587.1-201ENST00000447093 876 ntBASIC4.84□□□□□ -1.63
USP29Q9HBJ7 TPT1P12-201ENST00000448968 492 ntBASIC4.84□□□□□ -1.63
USP29Q9HBJ7 AL445669.2-201ENST00000454425 421 ntBASIC4.84□□□□□ -1.63
USP29Q9HBJ7 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.84□□□□□ -1.63
USP29Q9HBJ7 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.84□□□□□ -1.63
USP29Q9HBJ7 RPS5P7-201ENST00000456664 608 ntBASIC4.84□□□□□ -1.63
USP29Q9HBJ7 RPL31P3-201ENST00000458430 332 ntBASIC4.84□□□□□ -1.63
USP29Q9HBJ7 AC015724.1-201ENST00000478577 156 ntBASIC4.84□□□□□ -1.63
USP29Q9HBJ7 RPL7P18-201ENST00000478965 734 ntBASIC4.84□□□□□ -1.63
USP29Q9HBJ7 GAPDHP36-201ENST00000480688 918 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms