Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AC124312.4-201ENST00000605533 310 ntBASIC4.74□□□□□ -1.65
EBF3Q9H4W6 OR2BH1P-201ENST00000608850 864 ntBASIC4.74□□□□□ -1.65
EBF3Q9H4W6 SNX18P1Y-201ENST00000616231 511 ntBASIC4.74□□□□□ -1.65
EBF3Q9H4W6 AL158163.2-201ENST00000619110 700 ntBASIC4.74□□□□□ -1.65
EBF3Q9H4W6 AC073530.2-201ENST00000623987 261 ntBASIC4.74□□□□□ -1.65
EBF3Q9H4W6 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.74□□□□□ -1.65
EBF3Q9H4W6 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.74□□□□□ -1.65
EBF3Q9H4W6 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.74□□□□□ -1.65
EBF3Q9H4W6 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.74□□□□□ -1.65
EBF3Q9H4W6 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
EBF3Q9H4W6 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
EBF3Q9H4W6 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
EBF3Q9H4W6 AC017007.4-201ENST00000503353 1352 ntBASIC4.74□□□□□ -1.65
EBF3Q9H4W6 AL121950.1-201ENST00000624993 2077 ntBASIC4.74□□□□□ -1.65
EBF3Q9H4W6 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.74□□□□□ -1.65
EBF3Q9H4W6 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
EBF3Q9H4W6 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.74□□□□□ -1.65
EBF3Q9H4W6 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.74□□□□□ -1.65
EBF3Q9H4W6 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
EBF3Q9H4W6 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.73□□□□□ -1.65
EBF3Q9H4W6 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
EBF3Q9H4W6 RNU4-92P-201ENST00000363783 136 ntBASIC4.73□□□□□ -1.65
EBF3Q9H4W6 RNU6-729P-201ENST00000384399 107 ntBASIC4.73□□□□□ -1.65
EBF3Q9H4W6 OR6C69P-201ENST00000394268 893 ntBASIC4.73□□□□□ -1.65
EBF3Q9H4W6 RPS24P12-201ENST00000402084 394 ntBASIC4.73□□□□□ -1.65
EBF3Q9H4W6 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.73□□□□□ -1.65
EBF3Q9H4W6 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.73□□□□□ -1.65
EBF3Q9H4W6 AL365203.2-201ENST00000423444 196 ntBASIC4.73□□□□□ -1.65
EBF3Q9H4W6 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.73□□□□□ -1.65
EBF3Q9H4W6 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.73□□□□□ -1.65
EBF3Q9H4W6 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.73□□□□□ -1.65
EBF3Q9H4W6 PTENP1-201ENST00000447117 1215 ntBASIC4.73□□□□□ -1.65
EBF3Q9H4W6 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC4.73□□□□□ -1.65
EBF3Q9H4W6 RPS6P2-201ENST00000454208 705 ntBASIC4.73□□□□□ -1.65
EBF3Q9H4W6 RNU7-125P-201ENST00000458760 62 ntBASIC4.73□□□□□ -1.65
EBF3Q9H4W6 AC104689.1-201ENST00000473356 768 ntBASIC4.73□□□□□ -1.65
EBF3Q9H4W6 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
EBF3Q9H4W6 AC079203.1-201ENST00000487972 404 ntBASIC4.73□□□□□ -1.65
EBF3Q9H4W6 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.73□□□□□ -1.65
EBF3Q9H4W6 AC098799.3-201ENST00000506095 438 ntBASIC4.73□□□□□ -1.65
EBF3Q9H4W6 STMN1P2-201ENST00000508435 439 ntBASIC4.73□□□□□ -1.65
EBF3Q9H4W6 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.73□□□□□ -1.65
EBF3Q9H4W6 XKRY-201ENST00000510392 1100 ntBASIC4.73□□□□□ -1.65
EBF3Q9H4W6 MTND3P5-201ENST00000512798 333 ntBASIC4.73□□□□□ -1.65
EBF3Q9H4W6 RFPL4AP5-201ENST00000514977 504 ntBASIC4.73□□□□□ -1.65
EBF3Q9H4W6 NPM1P6-201ENST00000521088 871 ntBASIC4.73□□□□□ -1.65
EBF3Q9H4W6 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.73□□□□□ -1.65
EBF3Q9H4W6 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.73□□□□□ -1.65
EBF3Q9H4W6 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
EBF3Q9H4W6 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
EBF3Q9H4W6 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.73□□□□□ -1.65
EBF3Q9H4W6 AL354943.1-201ENST00000572103 781 ntBASIC4.73□□□□□ -1.65
EBF3Q9H4W6 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.73□□□□□ -1.65
EBF3Q9H4W6 SNORD39.2-201ENST00000579995 76 ntBASIC4.73□□□□□ -1.65
EBF3Q9H4W6 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.73□□□□□ -1.65
EBF3Q9H4W6 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC4.73□□□□□ -1.65
EBF3Q9H4W6 FAM106CP-201ENST00000582212 507 ntBASIC4.73□□□□□ -1.65
EBF3Q9H4W6 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.73□□□□□ -1.65
EBF3Q9H4W6 MIR3138-201ENST00000585238 82 ntBASIC4.73□□□□□ -1.65
EBF3Q9H4W6 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.73□□□□□ -1.65
EBF3Q9H4W6 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
EBF3Q9H4W6 ARF4P1-201ENST00000605447 541 ntBASIC4.73□□□□□ -1.65
EBF3Q9H4W6 AC013468.1-201ENST00000608680 598 ntBASIC4.73□□□□□ -1.65
EBF3Q9H4W6 AC114781.5-201ENST00000615297 108 ntBASIC4.73□□□□□ -1.65
EBF3Q9H4W6 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.73□□□□□ -1.65
EBF3Q9H4W6 AC234782.5-201ENST00000617723 324 ntBASIC4.73□□□□□ -1.65
EBF3Q9H4W6 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
EBF3Q9H4W6 AC139713.2-210ENST00000641741 992 ntBASIC4.73□□□□□ -1.65
EBF3Q9H4W6 MTND5P29-201ENST00000458676 1807 ntBASIC4.73□□□□□ -1.65
EBF3Q9H4W6 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
EBF3Q9H4W6 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
EBF3Q9H4W6 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
EBF3Q9H4W6 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
EBF3Q9H4W6 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
EBF3Q9H4W6 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.72□□□□□ -1.65
EBF3Q9H4W6 AL390237.1-201ENST00000404226 1415 ntBASIC4.72□□□□□ -1.65
EBF3Q9H4W6 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
EBF3Q9H4W6 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.72□□□□□ -1.65
EBF3Q9H4W6 SCN1A-220ENST00000641603 12506 ntBASIC4.72□□□□□ -1.65
EBF3Q9H4W6 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
EBF3Q9H4W6 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
EBF3Q9H4W6 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.72□□□□□ -1.65
EBF3Q9H4W6 RNU6-83P-201ENST00000384568 112 ntBASIC4.72□□□□□ -1.65
EBF3Q9H4W6 RNA5SP372-201ENST00000390836 115 ntBASIC4.72□□□□□ -1.65
EBF3Q9H4W6 AL355379.1-201ENST00000405542 640 ntBASIC4.72□□□□□ -1.65
EBF3Q9H4W6 HDGFP1-201ENST00000405943 252 ntBASIC4.72□□□□□ -1.65
EBF3Q9H4W6 UBE2V1P10-201ENST00000414685 269 ntBASIC4.72□□□□□ -1.65
EBF3Q9H4W6 TMSB10P2-201ENST00000416049 131 ntBASIC4.72□□□□□ -1.65
EBF3Q9H4W6 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC4.72□□□□□ -1.65
EBF3Q9H4W6 RPL17P36-201ENST00000420302 549 ntBASIC4.72□□□□□ -1.65
EBF3Q9H4W6 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.72□□□□□ -1.65
EBF3Q9H4W6 MTND4LP11-201ENST00000422184 280 ntBASIC4.72□□□□□ -1.65
EBF3Q9H4W6 RPL7P57-201ENST00000423238 740 ntBASIC4.72□□□□□ -1.65
EBF3Q9H4W6 RPF2P1-201ENST00000424137 906 ntBASIC4.72□□□□□ -1.65
EBF3Q9H4W6 RPS12P10-201ENST00000427031 377 ntBASIC4.72□□□□□ -1.65
EBF3Q9H4W6 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.72□□□□□ -1.65
EBF3Q9H4W6 HMGB3P10-201ENST00000434734 572 ntBASIC4.72□□□□□ -1.65
EBF3Q9H4W6 AL031667.1-201ENST00000440222 725 ntBASIC4.72□□□□□ -1.65
EBF3Q9H4W6 RPL34P26-201ENST00000445636 354 ntBASIC4.72□□□□□ -1.65
EBF3Q9H4W6 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 150.1 ms