Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 SKP1P1-201ENST00000438081 489 ntBASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 AC006011.1-201ENST00000442758 349 ntBASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 RNA5SP246-201ENST00000458909 119 ntBASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 RPL21P18-201ENST00000469899 480 ntBASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 OR52A4P-201ENST00000472867 958 ntBASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 AF213884.1-201ENST00000488102 463 ntBASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 RN7SL810P-201ENST00000493031 276 ntBASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 AC008427.1-201ENST00000503102 655 ntBASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 AC004069.2-201ENST00000505438 1114 ntBASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 OR8G5-201ENST00000524943 1041 ntBASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 PDCL2P2-201ENST00000533651 189 ntBASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 TRAV8-5-201ENST00000537369 341 ntBASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 AC008083.2-201ENST00000546707 476 ntBASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 MIR4270-201ENST00000581799 70 ntBASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 AC011492.1-201ENST00000600023 315 ntBASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 AC096947.1-201ENST00000603233 470 ntBASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 AC083899.3-201ENST00000603413 594 ntBASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 AL451044.1-201ENST00000604867 238 ntBASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 AC090948.1-201ENST00000607464 549 ntBASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 AC112503.1-201ENST00000608436 391 ntBASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 AC010608.3-201ENST00000625048 527 ntBASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 AC099654.8-201ENST00000637757 681 ntBASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 CIR1P2-201ENST00000514821 1342 ntBASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC28BQ9BUN5 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 AC116667.1-201ENST00000604855 2072 ntBASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 AL132640.2-201ENST00000559968 1698 ntBASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 SNORD35B-201ENST00000363660 87 ntBASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 RNU6-452P-201ENST00000384406 107 ntBASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 MIR142-201ENST00000384835 87 ntBASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 AL590704.1-201ENST00000402856 794 ntBASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 MTCO3P4-201ENST00000419236 787 ntBASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 BX510359.3-201ENST00000422168 306 ntBASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 AC073310.1-201ENST00000423226 1033 ntBASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 AC002075.2-201ENST00000425207 252 ntBASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 FO393414.1-201ENST00000428697 1184 ntBASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 NPM1P34-201ENST00000428821 893 ntBASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 HMGB3P5-201ENST00000428894 612 ntBASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 USP9YP7-201ENST00000436723 430 ntBASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 ARF4P4-201ENST00000439608 520 ntBASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 RPL7P61-201ENST00000451721 751 ntBASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 USP9YP32-201ENST00000452432 430 ntBASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 RN7SL354P-201ENST00000469282 294 ntBASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 MTND6P6-201ENST00000478031 263 ntBASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 OR5M14P-201ENST00000506803 618 ntBASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 AC069306.1-201ENST00000507006 843 ntBASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 IGLVIV-65-201ENST00000517313 360 ntBASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 OR4C2P-201ENST00000530855 1064 ntBASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 CYP2C60P-201ENST00000566088 139 ntBASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 AC023825.1-201ENST00000566704 1030 ntBASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 MIR4760-201ENST00000585040 80 ntBASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 AC008121.2-201ENST00000614647 523 ntBASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 MIR6780A-201ENST00000615089 68 ntBASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 MIR7155-201ENST00000615925 56 ntBASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 AC090510.2-201ENST00000617465 629 ntBASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 AC092628.2-201ENST00000622492 339 ntBASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.92□□□□□ -1.78
CCDC28BQ9BUN5 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 RIOK3P1-201ENST00000418778 1528 ntBASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 AP000568.1-201ENST00000282964 442 ntBASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC28BQ9BUN5 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms