Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 EDDM3DP-201ENST00000554692 434 ntBASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 CFL2-206ENST00000556161 546 ntTSL 4 BASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 AC055876.5-201ENST00000605667 259 ntBASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 AC087045.1-201ENST00000605856 382 ntBASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 AC106028.5-201ENST00000610332 395 ntBASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 PART1_1.1-201ENST00000611761 217 ntBASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 AC009159.1-201ENST00000618386 642 ntBASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 AL136221.1-201ENST00000621449 509 ntBASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 AC015871.5-202ENST00000623252 701 ntBASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDK5RAP1Q96SZ6 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CDK5RAP1Q96SZ6 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CDK5RAP1Q96SZ6 PABPC1P9-201ENST00000426076 1612 ntBASIC5.34□□□□□ -1.56
CDK5RAP1Q96SZ6 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 AC092376.2-201ENST00000622621 4116 ntBASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 AC131971.1-201ENST00000332881 1482 ntBASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 Y_RNA.372-201ENST00000365599 102 ntBASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 MT-TL1-201ENST00000386347 75 ntBASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 CCNG1P1-201ENST00000406783 885 ntBASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 RN7SKP125-201ENST00000410481 302 ntBASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 RPL21P108-201ENST00000413857 481 ntBASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 NPM1P24-201ENST00000428039 894 ntBASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 TMX2P1-201ENST00000436507 708 ntBASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 ARPC3P1-201ENST00000437218 533 ntBASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 DDX39BP2-208ENST00000453923 258 ntBASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 RNA5SP269-201ENST00000459032 137 ntBASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 AC091180.1-201ENST00000462104 372 ntBASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 KLF3P2-201ENST00000465138 268 ntBASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 AP000852.1-201ENST00000472460 573 ntBASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 MTCYBP17-201ENST00000503579 789 ntBASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 RNU6-513P-201ENST00000516104 104 ntBASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 AC092747.2-201ENST00000545069 983 ntBASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 AP000860.1-201ENST00000605250 559 ntBASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 UBE2Q2P2-203ENST00000613592 761 ntBASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 AL136981.2-201ENST00000617319 734 ntBASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 AC091905.4-201ENST00000623432 202 ntBASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CDK5RAP1Q96SZ6 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 VN2R3P-201ENST00000422626 1412 ntBASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 EED-206ENST00000527888 1422 ntTSL 2 BASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 AL079343.1-201ENST00000572358 1771 ntBASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CDK5RAP1Q96SZ6 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms