Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CSMD1Q96PZ7 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC2.83□□□□□ -1.96
CSMD1Q96PZ7 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC2.83□□□□□ -1.96
CSMD1Q96PZ7 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
CSMD1Q96PZ7 RNU1-108P-201ENST00000362556 161 ntBASIC2.83□□□□□ -1.96
CSMD1Q96PZ7 RPL21P40-201ENST00000428586 483 ntBASIC2.83□□□□□ -1.96
CSMD1Q96PZ7 RPL7P12-201ENST00000446719 750 ntBASIC2.83□□□□□ -1.96
CSMD1Q96PZ7 AC133134.1-201ENST00000466800 359 ntBASIC2.83□□□□□ -1.96
CSMD1Q96PZ7 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.83□□□□□ -1.96
CSMD1Q96PZ7 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.83□□□□□ -1.96
CSMD1Q96PZ7 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC2.83□□□□□ -1.96
CSMD1Q96PZ7 MAPK10-320ENST00000641462 6696 ntBASIC2.83□□□□□ -1.96
CSMD1Q96PZ7 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC2.83□□□□□ -1.96
CSMD1Q96PZ7 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CSMD1Q96PZ7 AC010401.2-201ENST00000575137 4934 ntBASIC2.83□□□□□ -1.96
CSMD1Q96PZ7 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
CSMD1Q96PZ7 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.83□□□□□ -1.96
CSMD1Q96PZ7 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
CSMD1Q96PZ7 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
CSMD1Q96PZ7 SNORA67.4-201ENST00000384688 142 ntBASIC2.83□□□□□ -1.96
CSMD1Q96PZ7 HDGFP1-201ENST00000405943 252 ntBASIC2.83□□□□□ -1.96
CSMD1Q96PZ7 ARL6IP1P2-201ENST00000431356 563 ntBASIC2.83□□□□□ -1.96
CSMD1Q96PZ7 AC126389.1-201ENST00000477436 290 ntBASIC2.83□□□□□ -1.96
CSMD1Q96PZ7 RNU6-991P-201ENST00000516168 107 ntBASIC2.83□□□□□ -1.96
CSMD1Q96PZ7 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC2.83□□□□□ -1.96
CSMD1Q96PZ7 IGHVIII-44-202ENST00000636235 289 ntBASIC2.83□□□□□ -1.96
CSMD1Q96PZ7 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC2.83□□□□□ -1.96
CSMD1Q96PZ7 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CSMD1Q96PZ7 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CSMD1Q96PZ7 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
CSMD1Q96PZ7 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC2.83□□□□□ -1.96
CSMD1Q96PZ7 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC2.83□□□□□ -1.96
CSMD1Q96PZ7 UBE3AP2-201ENST00000429033 2259 ntBASIC2.83□□□□□ -1.96
CSMD1Q96PZ7 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC2.83□□□□□ -1.96
CSMD1Q96PZ7 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
CSMD1Q96PZ7 AC021678.1-201ENST00000505195 936 ntBASIC2.82□□□□□ -1.96
CSMD1Q96PZ7 AC008413.1-201ENST00000511864 177 ntBASIC2.82□□□□□ -1.96
CSMD1Q96PZ7 OR4A12P-201ENST00000530847 918 ntBASIC2.82□□□□□ -1.96
CSMD1Q96PZ7 AC090877.1-201ENST00000561418 344 ntBASIC2.82□□□□□ -1.96
CSMD1Q96PZ7 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC2.82□□□□□ -1.96
CSMD1Q96PZ7 CYCSP39-201ENST00000565821 309 ntBASIC2.82□□□□□ -1.96
CSMD1Q96PZ7 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
CSMD1Q96PZ7 AC068647.1-201ENST00000489539 2265 ntBASIC2.82□□□□□ -1.96
CSMD1Q96PZ7 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CSMD1Q96PZ7 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CSMD1Q96PZ7 AC010300.1-201ENST00000600671 5134 ntBASIC2.82□□□□□ -1.96
CSMD1Q96PZ7 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CSMD1Q96PZ7 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.82□□□□□ -1.96
CSMD1Q96PZ7 TRAV15-201ENST00000556680 249 ntBASIC2.82□□□□□ -1.96
CSMD1Q96PZ7 AL133457.1-201ENST00000564251 987 ntBASIC2.82□□□□□ -1.96
CSMD1Q96PZ7 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC2.82□□□□□ -1.96
CSMD1Q96PZ7 MTND6P33-201ENST00000571794 183 ntBASIC2.82□□□□□ -1.96
CSMD1Q96PZ7 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC2.82□□□□□ -1.96
CSMD1Q96PZ7 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
CSMD1Q96PZ7 NAMPTP1-201ENST00000440465 2514 ntBASIC2.82□□□□□ -1.96
CSMD1Q96PZ7 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CSMD1Q96PZ7 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
CSMD1Q96PZ7 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CSMD1Q96PZ7 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CSMD1Q96PZ7 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.82□□□□□ -1.96
CSMD1Q96PZ7 RNU1-18P-201ENST00000363062 164 ntBASIC2.82□□□□□ -1.96
CSMD1Q96PZ7 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC2.82□□□□□ -1.96
CSMD1Q96PZ7 RPL7AP73-201ENST00000413490 353 ntBASIC2.82□□□□□ -1.96
CSMD1Q96PZ7 NPM1P48-201ENST00000436002 853 ntBASIC2.82□□□□□ -1.96
CSMD1Q96PZ7 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC2.82□□□□□ -1.96
CSMD1Q96PZ7 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC2.82□□□□□ -1.96
CSMD1Q96PZ7 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC2.82□□□□□ -1.96
CSMD1Q96PZ7 AC019227.1-201ENST00000526902 510 ntBASIC2.82□□□□□ -1.96
CSMD1Q96PZ7 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.82□□□□□ -1.96
CSMD1Q96PZ7 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC2.82□□□□□ -1.96
CSMD1Q96PZ7 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
CSMD1Q96PZ7 RN7SL371P-201ENST00000578099 267 ntBASIC2.82□□□□□ -1.96
CSMD1Q96PZ7 MIR2682-201ENST00000580305 110 ntBASIC2.82□□□□□ -1.96
CSMD1Q96PZ7 KLKP1-201ENST00000595979 403 ntBASIC2.82□□□□□ -1.96
CSMD1Q96PZ7 AC091905.1-201ENST00000624400 311 ntBASIC2.82□□□□□ -1.96
CSMD1Q96PZ7 AC064859.1-201ENST00000624741 174 ntBASIC2.82□□□□□ -1.96
CSMD1Q96PZ7 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.82□□□□□ -1.96
CSMD1Q96PZ7 AC006484.1-201ENST00000435086 1884 ntBASIC2.82□□□□□ -1.96
CSMD1Q96PZ7 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
CSMD1Q96PZ7 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
CSMD1Q96PZ7 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CSMD1Q96PZ7 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CSMD1Q96PZ7 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.81□□□□□ -1.96
CSMD1Q96PZ7 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.81□□□□□ -1.96
CSMD1Q96PZ7 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.81□□□□□ -1.96
CSMD1Q96PZ7 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CSMD1Q96PZ7 AC009963.1-201ENST00000417265 157 ntBASIC2.81□□□□□ -1.96
CSMD1Q96PZ7 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC2.81□□□□□ -1.96
CSMD1Q96PZ7 RPL21P6-201ENST00000479171 504 ntBASIC2.81□□□□□ -1.96
CSMD1Q96PZ7 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.81□□□□□ -1.96
CSMD1Q96PZ7 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.81□□□□□ -1.96
CSMD1Q96PZ7 VN1R90P-201ENST00000595717 726 ntBASIC2.81□□□□□ -1.96
CSMD1Q96PZ7 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC2.81□□□□□ -1.96
CSMD1Q96PZ7 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CSMD1Q96PZ7 BCORP1-203ENST00000513194 5093 ntBASIC2.81□□□□□ -1.96
CSMD1Q96PZ7 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CSMD1Q96PZ7 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CSMD1Q96PZ7 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CSMD1Q96PZ7 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CSMD1Q96PZ7 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms