Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AC090013.1-201ENST00000485147 480 ntBASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 RPS4XP15-201ENST00000489210 795 ntBASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 AC140172.1-201ENST00000502928 141 ntBASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 SNX5P1-201ENST00000505757 1041 ntBASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 ENPP7P9-201ENST00000514456 627 ntBASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 RNU6-583P-201ENST00000516012 92 ntBASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 RNA5SP392-201ENST00000516905 112 ntBASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 SOD1P3-201ENST00000518682 454 ntBASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 PCMTD1P2-201ENST00000565017 355 ntBASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 AC078795.2-201ENST00000602835 1252 ntBASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 AP001521.2-201ENST00000608772 546 ntBASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 AC006338.2-201ENST00000616864 791 ntBASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 AL356266.1-201ENST00000623311 483 ntBASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 AC231657.1-201ENST00000624313 397 ntBASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 AL353662.3-201ENST00000625131 237 ntBASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 AC131971.1-201ENST00000332881 1482 ntBASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CTHRC1Q96CG8 AL079343.1-201ENST00000572358 1771 ntBASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 AC027228.2-201ENST00000567141 2154 ntBASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 RN7SKP104-201ENST00000362605 328 ntBASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 RN7SKP95-201ENST00000362860 303 ntBASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 RNU6-660P-201ENST00000364566 109 ntBASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 RNU6-444P-201ENST00000383988 108 ntBASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 RNY3P10-201ENST00000384764 102 ntBASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 PRRC2CP1-201ENST00000404428 159 ntBASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 RNA5SP345-201ENST00000410646 108 ntBASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 MTCO1P21-201ENST00000416634 589 ntBASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 AC009237.2-201ENST00000421358 284 ntBASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 CYCSP46-201ENST00000423569 204 ntBASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 RBMY2QP-201ENST00000429799 1147 ntBASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 AL512286.1-201ENST00000439244 400 ntBASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 AC092641.1-201ENST00000440229 772 ntBASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 TRIM60P18-201ENST00000441518 828 ntBASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 AC000111.2-201ENST00000448200 210 ntBASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 ARPC3P2-201ENST00000457786 533 ntBASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 COX6B1P2-201ENST00000489624 230 ntBASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 AC004069.2-201ENST00000505438 1114 ntBASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 CBX3P3-201ENST00000508108 532 ntBASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 NDUFB5P1-201ENST00000508134 564 ntBASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 AC010625.1-201ENST00000511296 403 ntBASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 MTCYBP43-201ENST00000513621 740 ntBASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 RNA5SP216-201ENST00000516111 123 ntBASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 Y_RNA.719-201ENST00000517156 106 ntBASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 AP006245.2-201ENST00000522004 300 ntBASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 AP002963.1-201ENST00000530590 184 ntBASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 AC137768.1-201ENST00000549998 553 ntBASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 AC024940.4-201ENST00000605507 246 ntBASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 AL359740.1-201ENST00000624340 592 ntBASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 MTCO1P14-201ENST00000441695 1559 ntBASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 AL118496.1-201ENST00000440201 1812 ntBASIC4.6□□□□□ -1.67
CTHRC1Q96CG8 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms