Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
SNED1Q8TER0 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.6□□□□□ -1.67
SNED1Q8TER0 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.6□□□□□ -1.67
SNED1Q8TER0 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.6□□□□□ -1.67
SNED1Q8TER0 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SNED1Q8TER0 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.6□□□□□ -1.67
SNED1Q8TER0 AL022322.2-201ENST00000624072 20397 ntBASIC4.6□□□□□ -1.67
SNED1Q8TER0 AC139713.2-215ENST00000641428 5037 ntBASIC4.59□□□□□ -1.67
SNED1Q8TER0 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SNED1Q8TER0 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
SNED1Q8TER0 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
SNED1Q8TER0 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SNED1Q8TER0 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.59□□□□□ -1.67
SNED1Q8TER0 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SNED1Q8TER0 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SNED1Q8TER0 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SNED1Q8TER0 RNU4-40P-201ENST00000364351 143 ntBASIC4.59□□□□□ -1.67
SNED1Q8TER0 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
SNED1Q8TER0 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
SNED1Q8TER0 AL357078.2-201ENST00000416486 427 ntBASIC4.59□□□□□ -1.67
SNED1Q8TER0 EIF4EP1-201ENST00000422311 642 ntBASIC4.59□□□□□ -1.67
SNED1Q8TER0 AC114973.1-201ENST00000429057 632 ntBASIC4.59□□□□□ -1.67
SNED1Q8TER0 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.59□□□□□ -1.67
SNED1Q8TER0 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.59□□□□□ -1.67
SNED1Q8TER0 AL591623.2-201ENST00000449978 222 ntBASIC4.59□□□□□ -1.67
SNED1Q8TER0 EIF4A1P11-201ENST00000451239 222 ntBASIC4.59□□□□□ -1.67
SNED1Q8TER0 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.59□□□□□ -1.67
SNED1Q8TER0 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.59□□□□□ -1.67
SNED1Q8TER0 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.59□□□□□ -1.67
SNED1Q8TER0 AC084198.1-201ENST00000477747 402 ntBASIC4.59□□□□□ -1.67
SNED1Q8TER0 AC026784.1-201ENST00000507986 352 ntBASIC4.59□□□□□ -1.67
SNED1Q8TER0 STMN1P2-201ENST00000508435 439 ntBASIC4.59□□□□□ -1.67
SNED1Q8TER0 RNA5SP208-201ENST00000516156 78 ntBASIC4.59□□□□□ -1.67
SNED1Q8TER0 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.59□□□□□ -1.67
SNED1Q8TER0 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.59□□□□□ -1.67
SNED1Q8TER0 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.59□□□□□ -1.67
SNED1Q8TER0 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SNED1Q8TER0 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SNED1Q8TER0 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC4.59□□□□□ -1.67
SNED1Q8TER0 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.59□□□□□ -1.67
SNED1Q8TER0 AC104072.1-201ENST00000568817 668 ntBASIC4.59□□□□□ -1.67
SNED1Q8TER0 AC006116.7-201ENST00000590141 756 ntBASIC4.59□□□□□ -1.67
SNED1Q8TER0 VN1R87P-201ENST00000596706 487 ntBASIC4.59□□□□□ -1.67
SNED1Q8TER0 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.59□□□□□ -1.67
SNED1Q8TER0 ABI1P1-201ENST00000603375 1120 ntBASIC4.59□□□□□ -1.67
SNED1Q8TER0 OR4H6P-202ENST00000603819 340 ntBASIC4.59□□□□□ -1.67
SNED1Q8TER0 AL669942.2-201ENST00000620352 697 ntBASIC4.59□□□□□ -1.67
SNED1Q8TER0 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.59□□□□□ -1.67
SNED1Q8TER0 AC099654.9-201ENST00000637055 678 ntBASIC4.59□□□□□ -1.67
SNED1Q8TER0 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SNED1Q8TER0 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.59□□□□□ -1.68
SNED1Q8TER0 AL355596.1-201ENST00000565399 3996 ntBASIC4.59□□□□□ -1.68
SNED1Q8TER0 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.58□□□□□ -1.68
SNED1Q8TER0 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.58□□□□□ -1.68
SNED1Q8TER0 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.58□□□□□ -1.68
SNED1Q8TER0 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.58□□□□□ -1.68
SNED1Q8TER0 STAT4-203ENST00000409995 709 ntTSL 5 BASIC4.58□□□□□ -1.68
SNED1Q8TER0 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC4.58□□□□□ -1.68
SNED1Q8TER0 AL391219.1-201ENST00000422570 483 ntBASIC4.58□□□□□ -1.68
SNED1Q8TER0 AC011742.1-201ENST00000431448 434 ntBASIC4.58□□□□□ -1.68
SNED1Q8TER0 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.58□□□□□ -1.68
SNED1Q8TER0 SNORA71B-202ENST00000439232 272 ntBASIC4.58□□□□□ -1.68
SNED1Q8TER0 AL591503.2-201ENST00000442314 1005 ntBASIC4.58□□□□□ -1.68
SNED1Q8TER0 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC4.58□□□□□ -1.68
SNED1Q8TER0 AL139824.2-201ENST00000458731 1095 ntBASIC4.58□□□□□ -1.68
SNED1Q8TER0 RPL5P24-201ENST00000463742 885 ntBASIC4.58□□□□□ -1.68
SNED1Q8TER0 Y_RNA.717-201ENST00000517106 92 ntBASIC4.58□□□□□ -1.68
SNED1Q8TER0 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.58□□□□□ -1.68
SNED1Q8TER0 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.58□□□□□ -1.68
SNED1Q8TER0 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.58□□□□□ -1.68
SNED1Q8TER0 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.58□□□□□ -1.68
SNED1Q8TER0 AC069240.1-201ENST00000548774 375 ntBASIC4.58□□□□□ -1.68
SNED1Q8TER0 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.58□□□□□ -1.68
SNED1Q8TER0 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.58□□□□□ -1.68
SNED1Q8TER0 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.58□□□□□ -1.68
SNED1Q8TER0 AC124856.1-201ENST00000600819 896 ntBASIC4.58□□□□□ -1.68
SNED1Q8TER0 AC009974.1-201ENST00000608881 455 ntBASIC4.58□□□□□ -1.68
SNED1Q8TER0 AL355365.1-201ENST00000616480 294 ntBASIC4.58□□□□□ -1.68
SNED1Q8TER0 MIR8057-201ENST00000620957 69 ntBASIC4.58□□□□□ -1.68
SNED1Q8TER0 SEPT7P7-201ENST00000420492 1301 ntBASIC4.58□□□□□ -1.68
SNED1Q8TER0 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SNED1Q8TER0 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SNED1Q8TER0 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SNED1Q8TER0 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.58□□□□□ -1.68
SNED1Q8TER0 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SNED1Q8TER0 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SNED1Q8TER0 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
SNED1Q8TER0 OR10AB1P-202ENST00000641219 1686 ntBASIC4.58□□□□□ -1.68
SNED1Q8TER0 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
SNED1Q8TER0 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.58□□□□□ -1.68
SNED1Q8TER0 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.57□□□□□ -1.68
SNED1Q8TER0 AL365440.1-201ENST00000436135 2167 ntBASIC4.57□□□□□ -1.68
SNED1Q8TER0 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.57□□□□□ -1.68
SNED1Q8TER0 RNA5SP52-201ENST00000362448 134 ntBASIC4.57□□□□□ -1.68
SNED1Q8TER0 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.57□□□□□ -1.68
SNED1Q8TER0 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SNED1Q8TER0 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.57□□□□□ -1.68
SNED1Q8TER0 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.57□□□□□ -1.68
SNED1Q8TER0 SETD6P1-201ENST00000444575 317 ntBASIC4.57□□□□□ -1.68
SNED1Q8TER0 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms