Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLHC1Q8NHS4 AL157700.1-201ENST00000561973 1432 ntBASIC3.7□□□□□ -1.82
CLHC1Q8NHS4 OTUD4P1-201ENST00000237841 3067 ntBASIC3.69□□□□□ -1.82
CLHC1Q8NHS4 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.69□□□□□ -1.82
CLHC1Q8NHS4 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CLHC1Q8NHS4 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.69□□□□□ -1.82
CLHC1Q8NHS4 SNORA56-201ENST00000383966 129 ntBASIC3.69□□□□□ -1.82
CLHC1Q8NHS4 RNU6-185P-201ENST00000384421 107 ntBASIC3.69□□□□□ -1.82
CLHC1Q8NHS4 HMGN2P8-201ENST00000391458 268 ntBASIC3.69□□□□□ -1.82
CLHC1Q8NHS4 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.69□□□□□ -1.82
CLHC1Q8NHS4 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.69□□□□□ -1.82
CLHC1Q8NHS4 IFNNP1-201ENST00000429219 553 ntBASIC3.69□□□□□ -1.82
CLHC1Q8NHS4 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.69□□□□□ -1.82
CLHC1Q8NHS4 AC092809.1-201ENST00000441469 474 ntBASIC3.69□□□□□ -1.82
CLHC1Q8NHS4 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.69□□□□□ -1.82
CLHC1Q8NHS4 NPM1P49-201ENST00000448027 714 ntBASIC3.69□□□□□ -1.82
CLHC1Q8NHS4 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.69□□□□□ -1.82
CLHC1Q8NHS4 AC110792.1-201ENST00000491826 472 ntBASIC3.69□□□□□ -1.82
CLHC1Q8NHS4 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.69□□□□□ -1.82
CLHC1Q8NHS4 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.69□□□□□ -1.82
CLHC1Q8NHS4 AC090071.1-201ENST00000507713 644 ntBASIC3.69□□□□□ -1.82
CLHC1Q8NHS4 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.69□□□□□ -1.82
CLHC1Q8NHS4 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.69□□□□□ -1.82
CLHC1Q8NHS4 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CLHC1Q8NHS4 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.69□□□□□ -1.82
CLHC1Q8NHS4 OR6C73P-201ENST00000546432 358 ntBASIC3.69□□□□□ -1.82
CLHC1Q8NHS4 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.69□□□□□ -1.82
CLHC1Q8NHS4 AP005901.4-201ENST00000577336 569 ntBASIC3.69□□□□□ -1.82
CLHC1Q8NHS4 AP000919.1-202ENST00000581139 1264 ntBASIC3.69□□□□□ -1.82
CLHC1Q8NHS4 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.69□□□□□ -1.82
CLHC1Q8NHS4 HMGB1P51-201ENST00000605166 638 ntBASIC3.69□□□□□ -1.82
CLHC1Q8NHS4 RNU4-89P-201ENST00000607443 133 ntBASIC3.69□□□□□ -1.82
CLHC1Q8NHS4 AC005962.2-201ENST00000611427 652 ntBASIC3.69□□□□□ -1.82
CLHC1Q8NHS4 MIR8058-201ENST00000615737 89 ntBASIC3.69□□□□□ -1.82
CLHC1Q8NHS4 AC090506.2-201ENST00000624521 419 ntBASIC3.69□□□□□ -1.82
CLHC1Q8NHS4 ATE1-AS1-202ENST00000636460 506 ntBASIC3.69□□□□□ -1.82
CLHC1Q8NHS4 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.69□□□□□ -1.82
CLHC1Q8NHS4 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CLHC1Q8NHS4 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
CLHC1Q8NHS4 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CLHC1Q8NHS4 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.68□□□□□ -1.82
CLHC1Q8NHS4 AC138915.3-201ENST00000562908 1389 ntBASIC3.68□□□□□ -1.82
CLHC1Q8NHS4 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CLHC1Q8NHS4 AL121657.1-201ENST00000327215 531 ntBASIC3.68□□□□□ -1.82
CLHC1Q8NHS4 RNU6-386P-201ENST00000362650 107 ntBASIC3.68□□□□□ -1.82
CLHC1Q8NHS4 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.68□□□□□ -1.82
CLHC1Q8NHS4 RNU1-18P-201ENST00000363062 164 ntBASIC3.68□□□□□ -1.82
CLHC1Q8NHS4 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.68□□□□□ -1.82
CLHC1Q8NHS4 HLFP1-201ENST00000402375 499 ntBASIC3.68□□□□□ -1.82
CLHC1Q8NHS4 HNRNPDP2-201ENST00000406475 478 ntBASIC3.68□□□□□ -1.82
CLHC1Q8NHS4 HSPE1P8-201ENST00000406997 288 ntBASIC3.68□□□□□ -1.82
CLHC1Q8NHS4 AC069218.2-201ENST00000411665 344 ntBASIC3.68□□□□□ -1.82
CLHC1Q8NHS4 AC105402.1-201ENST00000413336 545 ntBASIC3.68□□□□□ -1.82
CLHC1Q8NHS4 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CLHC1Q8NHS4 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.68□□□□□ -1.82
CLHC1Q8NHS4 Z97055.1-201ENST00000419730 712 ntBASIC3.68□□□□□ -1.82
CLHC1Q8NHS4 HMGB1P32-201ENST00000425971 565 ntBASIC3.68□□□□□ -1.82
CLHC1Q8NHS4 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CLHC1Q8NHS4 AC016712.1-201ENST00000431088 378 ntBASIC3.68□□□□□ -1.82
CLHC1Q8NHS4 RPS26P40-201ENST00000435209 294 ntBASIC3.68□□□□□ -1.82
CLHC1Q8NHS4 AC023512.1-201ENST00000444513 499 ntBASIC3.68□□□□□ -1.82
CLHC1Q8NHS4 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.68□□□□□ -1.82
CLHC1Q8NHS4 AC010618.1-201ENST00000469924 477 ntBASIC3.68□□□□□ -1.82
CLHC1Q8NHS4 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
CLHC1Q8NHS4 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.68□□□□□ -1.82
CLHC1Q8NHS4 AC005798.1-201ENST00000513715 387 ntBASIC3.68□□□□□ -1.82
CLHC1Q8NHS4 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.68□□□□□ -1.82
CLHC1Q8NHS4 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CLHC1Q8NHS4 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.68□□□□□ -1.82
CLHC1Q8NHS4 AC025884.1-201ENST00000556034 378 ntBASIC3.68□□□□□ -1.82
CLHC1Q8NHS4 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.68□□□□□ -1.82
CLHC1Q8NHS4 AC099489.2-201ENST00000574976 260 ntBASIC3.68□□□□□ -1.82
CLHC1Q8NHS4 AL392112.1-201ENST00000605115 829 ntBASIC3.68□□□□□ -1.82
CLHC1Q8NHS4 AL592436.1-201ENST00000605135 558 ntBASIC3.68□□□□□ -1.82
CLHC1Q8NHS4 AL591034.3-201ENST00000605511 685 ntBASIC3.68□□□□□ -1.82
CLHC1Q8NHS4 AC138473.1-201ENST00000605717 526 ntBASIC3.68□□□□□ -1.82
CLHC1Q8NHS4 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.68□□□□□ -1.82
CLHC1Q8NHS4 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CLHC1Q8NHS4 MIR6758-201ENST00000620653 63 ntBASIC3.68□□□□□ -1.82
CLHC1Q8NHS4 AC091152.2-201ENST00000591628 2569 ntBASIC3.68□□□□□ -1.82
CLHC1Q8NHS4 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CLHC1Q8NHS4 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CLHC1Q8NHS4 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.68□□□□□ -1.82
CLHC1Q8NHS4 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.67□□□□□ -1.82
CLHC1Q8NHS4 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLHC1Q8NHS4 MIR141-201ENST00000384975 95 ntBASIC3.67□□□□□ -1.82
CLHC1Q8NHS4 ATP5F1P4-201ENST00000397288 746 ntBASIC3.67□□□□□ -1.82
CLHC1Q8NHS4 Z98941.1-201ENST00000407764 100 ntBASIC3.67□□□□□ -1.82
CLHC1Q8NHS4 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.67□□□□□ -1.82
CLHC1Q8NHS4 AL356095.1-201ENST00000417217 199 ntBASIC3.67□□□□□ -1.82
CLHC1Q8NHS4 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CLHC1Q8NHS4 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.67□□□□□ -1.82
CLHC1Q8NHS4 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.67□□□□□ -1.82
CLHC1Q8NHS4 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.67□□□□□ -1.82
CLHC1Q8NHS4 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.67□□□□□ -1.82
CLHC1Q8NHS4 Z74696.2-201ENST00000436514 498 ntBASIC3.67□□□□□ -1.82
CLHC1Q8NHS4 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.67□□□□□ -1.82
CLHC1Q8NHS4 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.67□□□□□ -1.82
CLHC1Q8NHS4 RPL29P29-201ENST00000448725 423 ntBASIC3.67□□□□□ -1.82
CLHC1Q8NHS4 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms