Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 AC120057.2-201ENST00000571520 271 ntBASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 VN1R84P-201ENST00000593697 235 ntBASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 AC091167.4-201ENST00000605079 184 ntBASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 AC012603.1-201ENST00000606424 528 ntBASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 AL136370.1-201ENST00000608166 691 ntBASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 AC021851.1-201ENST00000608537 1082 ntBASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 AC018926.1-201ENST00000616335 435 ntBASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 MIR6875-201ENST00000617506 72 ntBASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 AC073569.3-201ENST00000619055 682 ntBASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 AC068880.4-201ENST00000623082 495 ntBASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 AC015908.5-201ENST00000623289 343 ntBASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 BMS1P21-201ENST00000634565 365 ntBASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 U6.107-201ENST00000637108 79 ntBASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 AC106858.1-201ENST00000637497 429 ntBASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 MIR3074-201ENST00000384885 81 ntBASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 SNORA57.1-201ENST00000391227 145 ntBASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 HSPD1P16-201ENST00000402302 394 ntBASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 MIR1303-201ENST00000408625 86 ntBASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 SNORA3C-201ENST00000408792 125 ntBASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 JKAMPP1-201ENST00000413804 919 ntBASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 HIGD1AP4-201ENST00000430194 280 ntBASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 AL353597.2-202ENST00000434901 373 ntBASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 AL357520.1-201ENST00000441557 453 ntBASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 AL096829.2-201ENST00000446582 742 ntBASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 AL035407.2-201ENST00000454090 378 ntBASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 VN1R105P-201ENST00000486595 910 ntBASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 RNA5SP179-201ENST00000517284 121 ntBASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 IGKV2-36-201ENST00000519999 223 ntBASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 YPEL5P3-201ENST00000547227 352 ntBASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 RN7SL703P-201ENST00000578485 302 ntBASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 AL592436.1-201ENST00000605135 558 ntBASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 AL355816.1-201ENST00000607951 118 ntBASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 AC024941.1-201ENST00000612250 334 ntBASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 AC124312.6-202ENST00000623624 418 ntBASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 AC103798.2-201ENST00000624292 632 ntBASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 PHKBP1-201ENST00000450951 1951 ntBASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 FAM91A3P-201ENST00000456826 2544 ntBASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
C9orf40Q8IXQ3 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 AC027287.1-201ENST00000553115 1453 ntBASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 ZNF962P-201ENST00000443465 3140 ntBASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 HSPA8P19-201ENST00000505359 1517 ntBASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 AC019155.1-201ENST00000382242 574 ntBASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 AP002784.2-201ENST00000397300 549 ntBASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 ZNF603P-201ENST00000405613 487 ntBASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 AL356967.1-201ENST00000406305 431 ntBASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 AMD1P2-201ENST00000412936 992 ntBASIC3.67□□□□□ -1.82
C9orf40Q8IXQ3 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms