| CNTN4 | Q8IWV2 | AC004057.1-201 | ENST00000485827 | 348 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | AC007686.1-201 | ENST00000488511 | 463 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | AC013356.1-201 | ENST00000489027 | 564 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | AC018816.1-205 | ENST00000489771 | 509 nt | TSL 2 BASIC | 4.12 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | RPL31P61-201 | ENST00000496160 | 376 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | AC114741.1-201 | ENST00000504357 | 464 nt | TSL 2 BASIC | 4.12 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | GYPA-204 | ENST00000504786 | 357 nt | TSL 1 (best) BASIC | 4.12 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | AC010230.1-202 | ENST00000506265 | 592 nt | TSL 5 BASIC | 4.12 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | AC113404.3-201 | ENST00000506621 | 555 nt | TSL 5 BASIC | 4.12 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | AC098587.1-201 | ENST00000508241 | 540 nt | TSL 4 BASIC | 4.12 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | KRT19P6-201 | ENST00000510983 | 209 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | AC099522.1-202 | ENST00000514718 | 367 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | RNU4ATAC6P-201 | ENST00000516592 | 126 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | RNU7-143P-201 | ENST00000516781 | 65 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | RNU6-467P-201 | ENST00000517027 | 110 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | IGJP1-201 | ENST00000522682 | 475 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | PKIA-AS1-203 | ENST00000522807 | 692 nt | TSL 3 BASIC | 4.12 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | AP001999.2-201 | ENST00000529417 | 389 nt | TSL 3 BASIC | 4.12 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | CASP1-212 | ENST00000531166 | 300 nt | TSL 5 BASIC | 4.12 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | PRH1-206 | ENST00000543626 | 710 nt | APPRIS P2 TSL 5 BASIC | 4.12 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | AL163973.3-201 | ENST00000547093 | 430 nt | TSL 3 BASIC | 4.12 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | LINC00911-201 | ENST00000555272 | 546 nt | TSL 2 BASIC | 4.12 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | AC099518.4-204 | ENST00000567047 | 380 nt | TSL 2 BASIC | 4.12 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | AC144836.1-201 | ENST00000575911 | 340 nt | TSL 2 BASIC | 4.12 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | MIR4504-201 | ENST00000577413 | 92 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | MIR5096-201 | ENST00000583713 | 70 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | INTS6-AS1-210 | ENST00000595424 | 301 nt | TSL 5 BASIC | 4.12 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | ZNF616-203 | ENST00000597013 | 577 nt | TSL 4 BASIC | 4.12 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | AC008687.2-201 | ENST00000597865 | 520 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | AC114878.2-201 | ENST00000604863 | 1251 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | AL356218.2-201 | ENST00000605264 | 187 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | AL023583.1-201 | ENST00000607518 | 1143 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | AC121761.2-201 | ENST00000617300 | 689 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | AC106730.3-201 | ENST00000624568 | 641 nt | BASIC | 4.12 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | AC012593.1-212 | ENST00000627058 | 580 nt | TSL 5 BASIC | 4.12 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | CDH8-205 | ENST00000577730 | 8009 nt | TSL 5 BASIC | 4.12 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | LINC02120-201 | ENST00000505518 | 2008 nt | TSL 1 (best) BASIC | 4.12 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | CACNB4-257 | ENST00000637547 | 7658 nt | TSL 5 BASIC | 4.11 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | C8orf22-201 | ENST00000303202 | 1499 nt | TSL 1 (best) BASIC | 4.11 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | DOCK7-219 | ENST00000635253 | 6423 nt | APPRIS ALT2 TSL 5 BASIC | 4.11 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | LINC01239-202 | ENST00000436786 | 2347 nt | TSL 2 BASIC | 4.11 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | NR5A2-201 | ENST00000236914 | 3115 nt | TSL 1 (best) BASIC | 4.11 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | DGKI-204 | ENST00000453654 | 12928 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.11 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | CYP3A7-CYP3A51P-201 | ENST00000611620 | 1608 nt | TSL 5 BASIC | 4.11 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | RAP1GDS1-205 | ENST00000408927 | 3681 nt | APPRIS P3 TSL 2 BASIC | 4.11 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | RNA5SP509-201 | ENST00000364577 | 119 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | RNA5SP366-201 | ENST00000365454 | 123 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | SNORD65C-201 | ENST00000390962 | 71 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | ENSAP1-201 | ENST00000392855 | 326 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | AL512637.2-201 | ENST00000431287 | 1256 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | USP9YP7-201 | ENST00000436723 | 430 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | AL158053.1-201 | ENST00000441503 | 453 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | TPTE2P6-203 | ENST00000450973 | 649 nt | TSL 5 BASIC | 4.11 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | AC068707.1-201 | ENST00000451438 | 391 nt | TSL 3 BASIC | 4.11 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | USP9YP32-201 | ENST00000452432 | 430 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | MME-AS1-201 | ENST00000484721 | 828 nt | TSL 2 BASIC | 4.11 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | RPS27P23-201 | ENST00000487608 | 251 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | AF213884.1-201 | ENST00000488102 | 463 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | AC093864.1-201 | ENST00000504555 | 745 nt | TSL 5 BASIC | 4.11 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | RNU6-334P-201 | ENST00000517072 | 102 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | AC068672.1-201 | ENST00000520391 | 328 nt | TSL 3 BASIC | 4.11 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | OPRM1-223 | ENST00000524163 | 1251 nt | APPRIS ALT1 TSL 1 (best) BASIC | 4.11 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | OR4R3P-201 | ENST00000525084 | 838 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | AC090092.1-201 | ENST00000530576 | 510 nt | TSL 2 BASIC | 4.11 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | BPTFP1-201 | ENST00000579209 | 492 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | AC114684.1-201 | ENST00000587659 | 352 nt | TSL 3 BASIC | 4.11 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | AC063944.1-210 | ENST00000593837 | 519 nt | TSL 5 BASIC | 4.11 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | AL161896.1-201 | ENST00000597248 | 508 nt | TSL 4 BASIC | 4.11 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | AC092683.2-203 | ENST00000618807 | 788 nt | TSL 5 BASIC | 4.11 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | AL356118.1-201 | ENST00000635272 | 1078 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | AL773545.4-201 | ENST00000637262 | 310 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | AL513478.4-201 | ENST00000641636 | 310 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | OR1S2-202 | ENST00000641683 | 941 nt | APPRIS P1 BASIC | 4.11 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | AC016588.2-201 | ENST00000632484 | 3021 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | ZNF962P-201 | ENST00000443465 | 3140 nt | BASIC | 4.11 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | AC116667.1-201 | ENST00000604855 | 2072 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | EFHC1-205 | ENST00000538167 | 5308 nt | TSL 5 BASIC | 4.1 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | C1orf112-203 | ENST00000413811 | 2661 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.1 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | LINC01021-204 | ENST00000512067 | 1610 nt | TSL 1 (best) BASIC | 4.1 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | C6orf10-207 | ENST00000533191 | 2170 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.1 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | SPAM1-205 | ENST00000439500 | 2220 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.1 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | AC139713.2-214 | ENST00000642059 | 1811 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | RNU6-1243P-201 | ENST00000364028 | 107 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | RNA5SP167-201 | ENST00000365461 | 116 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | ZBTB8OS-202 | ENST00000373501 | 598 nt | TSL 5 BASIC | 4.1 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | TUBD1-204 | ENST00000376094 | 1154 nt | TSL 1 (best) BASIC | 4.1 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | EIF1AY-202 | ENST00000382772 | 746 nt | TSL 1 (best) BASIC | 4.1 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | RNU6-932P-201 | ENST00000391108 | 106 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | AL161909.1-201 | ENST00000397390 | 712 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | RPL31P2-201 | ENST00000413849 | 377 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | TRIM60P5Y-201 | ENST00000413946 | 574 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | AC010163.2-201 | ENST00000416341 | 381 nt | TSL 2 BASIC | 4.1 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | AL009174.1-201 | ENST00000426577 | 416 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | LINC01745-201 | ENST00000430921 | 372 nt | TSL 5 BASIC | 4.1 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | HCG2040054-201 | ENST00000435331 | 434 nt | TSL 3 BASIC | 4.1 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | AC006994.1-201 | ENST00000438212 | 839 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | AL591848.2-201 | ENST00000442712 | 522 nt | TSL 3 BASIC | 4.1 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | AC006011.1-201 | ENST00000442758 | 349 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | ANKRD30BP3-201 | ENST00000444850 | 1070 nt | BASIC | 4.1 | □□□□□ -1.75 | | |
| CNTN4 | Q8IWV2 | AC005002.1-201 | ENST00000447458 | 540 nt | BASIC | 4.1 | □□□□□ -1.75 | | |