Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 ELL2P4-201ENST00000446870 1376 ntBASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 MTND4P8-201ENST00000514997 1362 ntBASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 AC016716.1-201ENST00000265882 708 ntBASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 RNU6-1243P-201ENST00000364028 107 ntBASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 RNA5SP505-201ENST00000364748 108 ntBASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 RNU6-1151P-201ENST00000384684 107 ntBASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 MIR195-201ENST00000385194 87 ntBASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 MTCO2P8-201ENST00000412213 658 ntBASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 BTF3P8-201ENST00000414577 526 ntBASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 EI24P1-201ENST00000416584 867 ntBASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 AC027644.1-201ENST00000419595 298 ntBASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 MTCYBP24-201ENST00000420387 1106 ntBASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 UQCRBP1-201ENST00000421129 336 ntBASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 CEACAMP9-201ENST00000442990 513 ntBASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 ARL2BPP10-201ENST00000446487 531 ntBASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 TMED11P-201ENST00000479478 690 ntBASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 RPS4XP18-201ENST00000495480 763 ntBASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 GTF2IP9-201ENST00000502460 301 ntBASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 RNF138P1-201ENST00000502765 546 ntBASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 AC093752.1-206ENST00000511823 336 ntBASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 RNA5SP464-201ENST00000516251 108 ntBASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 RNU2-58P-201ENST00000516403 183 ntBASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 AC090281.1-201ENST00000523019 276 ntBASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 AP000827.1-201ENST00000527814 258 ntBASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 AP001781.1-201ENST00000530977 207 ntBASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 LRRC6P1-201ENST00000532188 885 ntBASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 AC008759.1-201ENST00000589783 983 ntBASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 AC008966.2-201ENST00000606157 453 ntBASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 AC019193.2-201ENST00000610012 634 ntBASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 AP005019.3-201ENST00000620418 560 ntBASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 MFSD8-216ENST00000641147 4009 ntBASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 MIR16-1-201ENST00000385271 89 ntBASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 RNA5SP372-201ENST00000390836 115 ntBASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 MTCO1P56-201ENST00000401674 224 ntBASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 MTCO2P31-201ENST00000402702 684 ntBASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 AC009237.10-201ENST00000414112 510 ntBASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 AC062016.2-201ENST00000420950 676 ntBASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 OSTCP5-201ENST00000425293 453 ntBASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 AL121877.1-201ENST00000453704 622 ntBASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 RPS29P33-201ENST00000456717 146 ntBASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 NAP1L1P3-201ENST00000462291 880 ntBASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 RN7SL738P-201ENST00000470264 297 ntBASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 AC087879.1-201ENST00000474343 374 ntBASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 RN7SL41P-201ENST00000476144 297 ntBASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 RPS27P23-201ENST00000487608 251 ntBASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 DEFB109F-201ENST00000491870 277 ntBASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 ARL4AP1-201ENST00000503220 705 ntBASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 AK3P4-201ENST00000504283 583 ntBASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 snoZ278.1-201ENST00000517059 112 ntBASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 GSTP1P1-201ENST00000548078 319 ntBASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 BPTFP1-201ENST00000579209 492 ntBASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 AC091178.1-203ENST00000584586 279 ntBASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 AP001542.2-201ENST00000593141 364 ntBASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 AC007687.1-201ENST00000602704 304 ntBASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 AL009028.1-201ENST00000604895 802 ntBASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.19□□□□□ -1.74
NUP54Q7Z3B4 AC027449.1-201ENST00000608890 407 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms