Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SHFQ7M4L6 LINC01739-205ENST00000641890 573 ntBASIC4.22□□□□□ -1.73
SHFQ7M4L6 Z98755.1-201ENST00000407015 1384 ntBASIC4.22□□□□□ -1.73
SHFQ7M4L6 EOGT-210ENST00000615922 1931 ntBASIC4.22□□□□□ -1.73
SHFQ7M4L6 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SHFQ7M4L6 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.22□□□□□ -1.73
SHFQ7M4L6 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.22□□□□□ -1.73
SHFQ7M4L6 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SHFQ7M4L6 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SHFQ7M4L6 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.22□□□□□ -1.73
SHFQ7M4L6 AC018529.3-201ENST00000624212 2254 ntBASIC4.21□□□□□ -1.73
SHFQ7M4L6 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
SHFQ7M4L6 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
SHFQ7M4L6 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
SHFQ7M4L6 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SHFQ7M4L6 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
SHFQ7M4L6 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.21□□□□□ -1.74
SHFQ7M4L6 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
SHFQ7M4L6 RPL23P2-201ENST00000320371 421 ntBASIC4.21□□□□□ -1.74
SHFQ7M4L6 RN7SKP115-201ENST00000363177 317 ntBASIC4.21□□□□□ -1.74
SHFQ7M4L6 RN7SKP224-201ENST00000364140 325 ntBASIC4.21□□□□□ -1.74
SHFQ7M4L6 RNU6-115P-201ENST00000364310 107 ntBASIC4.21□□□□□ -1.74
SHFQ7M4L6 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
SHFQ7M4L6 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.21□□□□□ -1.74
SHFQ7M4L6 MIR921-201ENST00000401133 56 ntBASIC4.21□□□□□ -1.74
SHFQ7M4L6 RNU6-603P-201ENST00000411403 107 ntBASIC4.21□□□□□ -1.74
SHFQ7M4L6 DPPA2P3-201ENST00000411853 655 ntBASIC4.21□□□□□ -1.74
SHFQ7M4L6 CEACAMP8-201ENST00000413902 580 ntBASIC4.21□□□□□ -1.74
SHFQ7M4L6 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.21□□□□□ -1.74
SHFQ7M4L6 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.21□□□□□ -1.74
SHFQ7M4L6 AC092634.6-201ENST00000418558 192 ntBASIC4.21□□□□□ -1.74
SHFQ7M4L6 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.21□□□□□ -1.74
SHFQ7M4L6 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.21□□□□□ -1.74
SHFQ7M4L6 AL645608.4-201ENST00000423619 154 ntBASIC4.21□□□□□ -1.74
SHFQ7M4L6 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.21□□□□□ -1.74
SHFQ7M4L6 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.21□□□□□ -1.74
SHFQ7M4L6 AL513175.1-201ENST00000431492 780 ntBASIC4.21□□□□□ -1.74
SHFQ7M4L6 AC010881.1-201ENST00000433830 235 ntBASIC4.21□□□□□ -1.74
SHFQ7M4L6 RPL7P11-201ENST00000437586 658 ntBASIC4.21□□□□□ -1.74
SHFQ7M4L6 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.21□□□□□ -1.74
SHFQ7M4L6 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC4.21□□□□□ -1.74
SHFQ7M4L6 KATNBL1P3-201ENST00000443475 909 ntBASIC4.21□□□□□ -1.74
SHFQ7M4L6 BZW1P2-201ENST00000473537 826 ntBASIC4.21□□□□□ -1.74
SHFQ7M4L6 RPL23AP65-201ENST00000475608 468 ntBASIC4.21□□□□□ -1.74
SHFQ7M4L6 AC082651.2-201ENST00000496833 166 ntBASIC4.21□□□□□ -1.74
SHFQ7M4L6 AC147055.4-201ENST00000504399 745 ntBASIC4.21□□□□□ -1.74
SHFQ7M4L6 MTND1P22-201ENST00000510572 951 ntBASIC4.21□□□□□ -1.74
SHFQ7M4L6 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.21□□□□□ -1.74
SHFQ7M4L6 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.21□□□□□ -1.74
SHFQ7M4L6 RN7SKP147-201ENST00000517154 244 ntBASIC4.21□□□□□ -1.74
SHFQ7M4L6 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.21□□□□□ -1.74
SHFQ7M4L6 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.21□□□□□ -1.74
SHFQ7M4L6 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.21□□□□□ -1.74
SHFQ7M4L6 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.21□□□□□ -1.74
SHFQ7M4L6 AC093519.1-201ENST00000566109 298 ntBASIC4.21□□□□□ -1.74
SHFQ7M4L6 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.21□□□□□ -1.74
SHFQ7M4L6 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.21□□□□□ -1.74
SHFQ7M4L6 HMGB2P1-201ENST00000591146 634 ntBASIC4.21□□□□□ -1.74
SHFQ7M4L6 AC124312.4-201ENST00000605533 310 ntBASIC4.21□□□□□ -1.74
SHFQ7M4L6 AC007497.1-201ENST00000610421 561 ntBASIC4.21□□□□□ -1.74
SHFQ7M4L6 AC116447.1-201ENST00000613153 453 ntBASIC4.21□□□□□ -1.74
SHFQ7M4L6 AL354976.1-201ENST00000613843 387 ntBASIC4.21□□□□□ -1.74
SHFQ7M4L6 AL607023.1-201ENST00000620045 248 ntBASIC4.21□□□□□ -1.74
SHFQ7M4L6 AP001005.3-201ENST00000622049 129 ntBASIC4.21□□□□□ -1.74
SHFQ7M4L6 AP003072.4-201ENST00000624580 310 ntBASIC4.21□□□□□ -1.74
SHFQ7M4L6 MTND5P31-201ENST00000419366 1374 ntBASIC4.21□□□□□ -1.74
SHFQ7M4L6 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
SHFQ7M4L6 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
SHFQ7M4L6 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.21□□□□□ -1.74
SHFQ7M4L6 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SHFQ7M4L6 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SHFQ7M4L6 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
SHFQ7M4L6 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SHFQ7M4L6 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.21□□□□□ -1.74
SHFQ7M4L6 AC107982.1-201ENST00000507171 1300 ntBASIC4.21□□□□□ -1.74
SHFQ7M4L6 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
SHFQ7M4L6 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
SHFQ7M4L6 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SHFQ7M4L6 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SHFQ7M4L6 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
SHFQ7M4L6 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
SHFQ7M4L6 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
SHFQ7M4L6 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.2□□□□□ -1.74
SHFQ7M4L6 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
SHFQ7M4L6 RNU1-108P-201ENST00000362556 161 ntBASIC4.2□□□□□ -1.74
SHFQ7M4L6 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SHFQ7M4L6 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SHFQ7M4L6 RN7SKP167-201ENST00000411047 285 ntBASIC4.2□□□□□ -1.74
SHFQ7M4L6 AC009302.1-201ENST00000417147 390 ntBASIC4.2□□□□□ -1.74
SHFQ7M4L6 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SHFQ7M4L6 AC233981.1-201ENST00000423224 461 ntBASIC4.2□□□□□ -1.74
SHFQ7M4L6 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SHFQ7M4L6 RPP40P1-201ENST00000426762 456 ntBASIC4.2□□□□□ -1.74
SHFQ7M4L6 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.2□□□□□ -1.74
SHFQ7M4L6 AC008072.1-201ENST00000434254 824 ntBASIC4.2□□□□□ -1.74
SHFQ7M4L6 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.2□□□□□ -1.74
SHFQ7M4L6 UBE2D3P4-201ENST00000441973 436 ntBASIC4.2□□□□□ -1.74
SHFQ7M4L6 AL591503.2-201ENST00000442314 1005 ntBASIC4.2□□□□□ -1.74
SHFQ7M4L6 RSL24D1P3-201ENST00000449255 495 ntBASIC4.2□□□□□ -1.74
SHFQ7M4L6 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms