Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 MIR6500-201ENST00000622700 86 ntBASIC2.88□□□□□ -1.95
HIST1H1AQ02539 AC073530.2-201ENST00000623987 261 ntBASIC2.88□□□□□ -1.95
HIST1H1AQ02539 MIR6830-201ENST00000636015 70 ntBASIC2.88□□□□□ -1.95
HIST1H1AQ02539 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
HIST1H1AQ02539 SRP72P2-201ENST00000344851 1979 ntBASIC2.88□□□□□ -1.95
HIST1H1AQ02539 AC007496.3-201ENST00000624987 3443 ntBASIC2.88□□□□□ -1.95
HIST1H1AQ02539 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC2.88□□□□□ -1.95
HIST1H1AQ02539 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC2.88□□□□□ -1.95
HIST1H1AQ02539 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
HIST1H1AQ02539 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HIST1H1AQ02539 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HIST1H1AQ02539 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HIST1H1AQ02539 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
HIST1H1AQ02539 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HIST1H1AQ02539 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HIST1H1AQ02539 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HIST1H1AQ02539 AL121657.1-201ENST00000327215 531 ntBASIC2.87□□□□□ -1.95
HIST1H1AQ02539 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HIST1H1AQ02539 RNA5SP189-201ENST00000364920 115 ntBASIC2.87□□□□□ -1.95
HIST1H1AQ02539 SNORA62-201ENST00000365493 153 ntBASIC2.87□□□□□ -1.95
HIST1H1AQ02539 SNORA48.8-201ENST00000391324 134 ntBASIC2.87□□□□□ -1.95
HIST1H1AQ02539 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HIST1H1AQ02539 SEPT7P2-202ENST00000398921 823 ntBASIC2.87□□□□□ -1.95
HIST1H1AQ02539 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC2.87□□□□□ -1.95
HIST1H1AQ02539 HIGD1AP12-201ENST00000427832 281 ntBASIC2.87□□□□□ -1.95
HIST1H1AQ02539 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC2.87□□□□□ -1.95
HIST1H1AQ02539 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC2.87□□□□□ -1.95
HIST1H1AQ02539 TRIM60P9Y-201ENST00000438459 816 ntBASIC2.87□□□□□ -1.95
HIST1H1AQ02539 CBX1P4-201ENST00000439415 457 ntBASIC2.87□□□□□ -1.95
HIST1H1AQ02539 AL353898.1-201ENST00000444055 238 ntBASIC2.87□□□□□ -1.95
HIST1H1AQ02539 TRIM60P11Y-201ENST00000445313 801 ntBASIC2.87□□□□□ -1.95
HIST1H1AQ02539 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC2.87□□□□□ -1.95
HIST1H1AQ02539 PPIAP3-201ENST00000450588 505 ntBASIC2.87□□□□□ -1.95
HIST1H1AQ02539 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC2.87□□□□□ -1.95
HIST1H1AQ02539 RPS4XP22-201ENST00000480755 780 ntBASIC2.87□□□□□ -1.95
HIST1H1AQ02539 RPS4XP15-201ENST00000489210 795 ntBASIC2.87□□□□□ -1.95
HIST1H1AQ02539 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC2.87□□□□□ -1.95
HIST1H1AQ02539 HPRT1P1-201ENST00000509498 657 ntBASIC2.87□□□□□ -1.95
HIST1H1AQ02539 TXNP6-201ENST00000510190 310 ntBASIC2.87□□□□□ -1.95
HIST1H1AQ02539 RN7SKP82-201ENST00000516786 223 ntBASIC2.87□□□□□ -1.95
HIST1H1AQ02539 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC2.87□□□□□ -1.95
HIST1H1AQ02539 AC022695.1-201ENST00000522089 237 ntBASIC2.87□□□□□ -1.95
HIST1H1AQ02539 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC2.87□□□□□ -1.95
HIST1H1AQ02539 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC2.87□□□□□ -1.95
HIST1H1AQ02539 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.87□□□□□ -1.95
HIST1H1AQ02539 TRAV37-201ENST00000553906 342 ntBASIC2.87□□□□□ -1.95
HIST1H1AQ02539 AGGF1P6-201ENST00000569213 976 ntBASIC2.87□□□□□ -1.95
HIST1H1AQ02539 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC2.87□□□□□ -1.95
HIST1H1AQ02539 AC015726.1-201ENST00000602353 681 ntBASIC2.87□□□□□ -1.95
HIST1H1AQ02539 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HIST1H1AQ02539 AL591034.3-201ENST00000605511 685 ntBASIC2.87□□□□□ -1.95
HIST1H1AQ02539 AC090425.2-201ENST00000608818 501 ntBASIC2.87□□□□□ -1.95
HIST1H1AQ02539 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HIST1H1AQ02539 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC2.87□□□□□ -1.95
HIST1H1AQ02539 AC006338.2-201ENST00000616864 791 ntBASIC2.87□□□□□ -1.95
HIST1H1AQ02539 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC2.87□□□□□ -1.95
HIST1H1AQ02539 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC2.87□□□□□ -1.95
HIST1H1AQ02539 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HIST1H1AQ02539 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.86□□□□□ -1.95
HIST1H1AQ02539 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC2.86□□□□□ -1.95
HIST1H1AQ02539 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
HIST1H1AQ02539 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
HIST1H1AQ02539 RNA5SP295-201ENST00000362655 121 ntBASIC2.86□□□□□ -1.95
HIST1H1AQ02539 ACEA_U3.1-201ENST00000363057 217 ntBASIC2.86□□□□□ -1.95
HIST1H1AQ02539 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC2.86□□□□□ -1.95
HIST1H1AQ02539 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
HIST1H1AQ02539 MIR199A2-201ENST00000385289 110 ntBASIC2.86□□□□□ -1.95
HIST1H1AQ02539 ST13P16-201ENST00000401760 781 ntBASIC2.86□□□□□ -1.95
HIST1H1AQ02539 RN7SKP222-201ENST00000410651 315 ntBASIC2.86□□□□□ -1.95
HIST1H1AQ02539 OR8G2P-201ENST00000412796 908 ntBASIC2.86□□□□□ -1.95
HIST1H1AQ02539 AL356095.1-201ENST00000417217 199 ntBASIC2.86□□□□□ -1.95
HIST1H1AQ02539 AL807761.1-201ENST00000417622 171 ntBASIC2.86□□□□□ -1.95
HIST1H1AQ02539 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC2.86□□□□□ -1.95
HIST1H1AQ02539 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC2.86□□□□□ -1.95
HIST1H1AQ02539 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC2.86□□□□□ -1.95
HIST1H1AQ02539 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC2.86□□□□□ -1.95
HIST1H1AQ02539 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HIST1H1AQ02539 MTCYBP21-201ENST00000443300 1113 ntBASIC2.86□□□□□ -1.95
HIST1H1AQ02539 AC006326.1-201ENST00000445465 787 ntBASIC2.86□□□□□ -1.95
HIST1H1AQ02539 AC239367.2-201ENST00000447309 705 ntBASIC2.86□□□□□ -1.95
HIST1H1AQ02539 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC2.86□□□□□ -1.95
HIST1H1AQ02539 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC2.86□□□□□ -1.95
HIST1H1AQ02539 RPS27P29-201ENST00000463110 252 ntBASIC2.86□□□□□ -1.95
HIST1H1AQ02539 AC092754.2-201ENST00000463506 460 ntBASIC2.86□□□□□ -1.95
HIST1H1AQ02539 AC084198.1-201ENST00000477747 402 ntBASIC2.86□□□□□ -1.95
HIST1H1AQ02539 AC108941.1-201ENST00000502853 530 ntBASIC2.86□□□□□ -1.95
HIST1H1AQ02539 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC2.86□□□□□ -1.95
HIST1H1AQ02539 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC2.86□□□□□ -1.95
HIST1H1AQ02539 RPL12P22-201ENST00000519073 490 ntBASIC2.86□□□□□ -1.95
HIST1H1AQ02539 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC2.86□□□□□ -1.95
HIST1H1AQ02539 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC2.86□□□□□ -1.95
HIST1H1AQ02539 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC2.86□□□□□ -1.95
HIST1H1AQ02539 AC087888.1-201ENST00000550884 1254 ntBASIC2.86□□□□□ -1.95
HIST1H1AQ02539 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC2.86□□□□□ -1.95
HIST1H1AQ02539 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC2.86□□□□□ -1.95
HIST1H1AQ02539 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC2.86□□□□□ -1.95
HIST1H1AQ02539 MIR4738-201ENST00000579134 87 ntBASIC2.86□□□□□ -1.95
HIST1H1AQ02539 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC2.86□□□□□ -1.95
HIST1H1AQ02539 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.86□□□□□ -1.95
HIST1H1AQ02539 SNORA51-201ENST00000606420 132 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 156.3 ms