Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 DUXAP2-201ENST00000519198 589 ntBASIC3.21□□□□□ -1.9
UBA52P62987 AC109635.6-201ENST00000525487 1113 ntBASIC3.21□□□□□ -1.9
UBA52P62987 OR5AP1P-201ENST00000529730 940 ntBASIC3.21□□□□□ -1.9
UBA52P62987 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.21□□□□□ -1.9
UBA52P62987 AC011602.1-201ENST00000546484 331 ntBASIC3.21□□□□□ -1.9
UBA52P62987 TGIF1P1-201ENST00000558095 802 ntBASIC3.21□□□□□ -1.9
UBA52P62987 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.21□□□□□ -1.9
UBA52P62987 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.21□□□□□ -1.9
UBA52P62987 AC015726.1-201ENST00000602353 681 ntBASIC3.21□□□□□ -1.9
UBA52P62987 SRGNP1-201ENST00000603392 451 ntBASIC3.21□□□□□ -1.9
UBA52P62987 AL161756.2-201ENST00000604597 246 ntBASIC3.21□□□□□ -1.9
UBA52P62987 AC005972.3-201ENST00000606304 481 ntBASIC3.21□□□□□ -1.9
UBA52P62987 AL158062.1-201ENST00000619632 745 ntBASIC3.21□□□□□ -1.9
UBA52P62987 AC000123.2-201ENST00000623124 461 ntBASIC3.21□□□□□ -1.9
UBA52P62987 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
UBA52P62987 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.21□□□□□ -1.9
UBA52P62987 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.21□□□□□ -1.9
UBA52P62987 MFSD8-236ENST00000641509 4050 ntBASIC3.21□□□□□ -1.9
UBA52P62987 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
UBA52P62987 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
UBA52P62987 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
UBA52P62987 AC058791.1-201ENST00000608412 3198 ntBASIC3.2□□□□□ -1.9
UBA52P62987 CASC19-284ENST00000642142 1868 ntBASIC3.2□□□□□ -1.9
UBA52P62987 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
UBA52P62987 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
UBA52P62987 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
UBA52P62987 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
UBA52P62987 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
UBA52P62987 RNA5SP97-201ENST00000365006 84 ntBASIC3.2□□□□□ -1.9
UBA52P62987 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.2□□□□□ -1.9
UBA52P62987 RNU6-55P-201ENST00000411092 107 ntBASIC3.2□□□□□ -1.9
UBA52P62987 RNU6-954P-201ENST00000411355 107 ntBASIC3.2□□□□□ -1.9
UBA52P62987 RPL7AP73-201ENST00000413490 353 ntBASIC3.2□□□□□ -1.9
UBA52P62987 AC091286.1-201ENST00000431233 461 ntBASIC3.2□□□□□ -1.9
UBA52P62987 AL358472.1-201ENST00000431295 329 ntBASIC3.2□□□□□ -1.9
UBA52P62987 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.2□□□□□ -1.9
UBA52P62987 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.2□□□□□ -1.9
UBA52P62987 RPS11P1-201ENST00000451072 473 ntBASIC3.2□□□□□ -1.9
UBA52P62987 RPL12P26-201ENST00000452430 487 ntBASIC3.2□□□□□ -1.9
UBA52P62987 AL133244.1-201ENST00000456007 258 ntBASIC3.2□□□□□ -1.9
UBA52P62987 snoU13.24-201ENST00000458998 104 ntBASIC3.2□□□□□ -1.9
UBA52P62987 RPS20P21-201ENST00000466859 343 ntBASIC3.2□□□□□ -1.9
UBA52P62987 RN7SL330P-201ENST00000469709 307 ntBASIC3.2□□□□□ -1.9
UBA52P62987 AC087312.1-201ENST00000471411 480 ntBASIC3.2□□□□□ -1.9
UBA52P62987 AC087385.1-201ENST00000475062 312 ntBASIC3.2□□□□□ -1.9
UBA52P62987 NPM1P17-201ENST00000479221 602 ntBASIC3.2□□□□□ -1.9
UBA52P62987 ACTG1P13-201ENST00000486987 1043 ntBASIC3.2□□□□□ -1.9
UBA52P62987 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.2□□□□□ -1.9
UBA52P62987 KRT19P6-201ENST00000510983 209 ntBASIC3.2□□□□□ -1.9
UBA52P62987 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.2□□□□□ -1.9
UBA52P62987 AC021733.2-201ENST00000518830 497 ntBASIC3.2□□□□□ -1.9
UBA52P62987 KCTD9P6-201ENST00000522306 950 ntBASIC3.2□□□□□ -1.9
UBA52P62987 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
UBA52P62987 AC025260.1-201ENST00000548858 430 ntBASIC3.2□□□□□ -1.9
UBA52P62987 CCNG2P1-201ENST00000549521 1000 ntBASIC3.2□□□□□ -1.9
UBA52P62987 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.2□□□□□ -1.9
UBA52P62987 AC018552.3-201ENST00000567416 561 ntBASIC3.2□□□□□ -1.9
UBA52P62987 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.2□□□□□ -1.9
UBA52P62987 AL391497.1-201ENST00000608671 547 ntBASIC3.2□□□□□ -1.9
UBA52P62987 AC005344.1-201ENST00000613391 459 ntBASIC3.2□□□□□ -1.9
UBA52P62987 AL034408.1-202ENST00000636088 415 ntBASIC3.2□□□□□ -1.9
UBA52P62987 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
UBA52P62987 AP004289.2-201ENST00000444413 1457 ntBASIC3.2□□□□□ -1.9
UBA52P62987 AC024560.2-201ENST00000507981 1497 ntBASIC3.2□□□□□ -1.9
UBA52P62987 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
UBA52P62987 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.2□□□□□ -1.9
UBA52P62987 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
UBA52P62987 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
UBA52P62987 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
UBA52P62987 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.19□□□□□ -1.9
UBA52P62987 OTUD4P1-201ENST00000237841 3067 ntBASIC3.19□□□□□ -1.9
UBA52P62987 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.19□□□□□ -1.9
UBA52P62987 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
UBA52P62987 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
UBA52P62987 SNORD6-201ENST00000365444 73 ntBASIC3.19□□□□□ -1.9
UBA52P62987 SNORA5A-201ENST00000384111 134 ntBASIC3.19□□□□□ -1.9
UBA52P62987 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
UBA52P62987 AL136116.1-201ENST00000403591 381 ntBASIC3.19□□□□□ -1.9
UBA52P62987 AC017079.2-201ENST00000416102 485 ntBASIC3.19□□□□□ -1.9
UBA52P62987 AC008280.1-201ENST00000418851 412 ntBASIC3.19□□□□□ -1.9
UBA52P62987 RPS12P23-201ENST00000419579 400 ntBASIC3.19□□□□□ -1.9
UBA52P62987 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.19□□□□□ -1.9
UBA52P62987 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.19□□□□□ -1.9
UBA52P62987 PDSS1P2-201ENST00000449397 678 ntBASIC3.19□□□□□ -1.9
UBA52P62987 HMGN2P7-201ENST00000456186 273 ntBASIC3.19□□□□□ -1.9
UBA52P62987 AC010401.1-201ENST00000463867 348 ntBASIC3.19□□□□□ -1.9
UBA52P62987 SEPT7P6-201ENST00000469999 1143 ntBASIC3.19□□□□□ -1.9
UBA52P62987 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.19□□□□□ -1.9
UBA52P62987 RPS3AP50-201ENST00000487064 803 ntBASIC3.19□□□□□ -1.9
UBA52P62987 AGGF1P3-201ENST00000493675 1213 ntBASIC3.19□□□□□ -1.9
UBA52P62987 AC006499.5-201ENST00000505037 514 ntBASIC3.19□□□□□ -1.9
UBA52P62987 TXNP6-201ENST00000510190 310 ntBASIC3.19□□□□□ -1.9
UBA52P62987 AC093853.1-201ENST00000515689 483 ntBASIC3.19□□□□□ -1.9
UBA52P62987 RNU1-95P-201ENST00000516357 160 ntBASIC3.19□□□□□ -1.9
UBA52P62987 RNU1-128P-201ENST00000516704 160 ntBASIC3.19□□□□□ -1.9
UBA52P62987 RNA5SP179-201ENST00000517284 121 ntBASIC3.19□□□□□ -1.9
UBA52P62987 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.19□□□□□ -1.9
UBA52P62987 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.19□□□□□ -1.9
UBA52P62987 AP001636.2-201ENST00000525517 696 ntBASIC3.19□□□□□ -1.9
UBA52P62987 OR4A2P-201ENST00000527276 913 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms