Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AC073522.1-201ENST00000483312 377 ntBASIC4.94□□□□□ -1.62
COPB1P53618 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.94□□□□□ -1.62
COPB1P53618 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.94□□□□□ -1.62
COPB1P53618 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.94□□□□□ -1.62
COPB1P53618 RPS27AP18-201ENST00000515536 459 ntBASIC4.94□□□□□ -1.62
COPB1P53618 RNU6-232P-201ENST00000517144 64 ntBASIC4.94□□□□□ -1.62
COPB1P53618 ELOCP32-201ENST00000548625 324 ntBASIC4.94□□□□□ -1.62
COPB1P53618 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.94□□□□□ -1.62
COPB1P53618 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.94□□□□□ -1.62
COPB1P53618 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.94□□□□□ -1.62
COPB1P53618 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.94□□□□□ -1.62
COPB1P53618 MTND6P33-201ENST00000571794 183 ntBASIC4.94□□□□□ -1.62
COPB1P53618 MIR3667-201ENST00000581025 74 ntBASIC4.94□□□□□ -1.62
COPB1P53618 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.94□□□□□ -1.62
COPB1P53618 AL512782.1-201ENST00000603093 364 ntBASIC4.94□□□□□ -1.62
COPB1P53618 AC087283.1-201ENST00000604029 1074 ntBASIC4.94□□□□□ -1.62
COPB1P53618 AL031320.1-201ENST00000604177 357 ntBASIC4.94□□□□□ -1.62
COPB1P53618 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.94□□□□□ -1.62
COPB1P53618 AC072039.2-201ENST00000608883 439 ntBASIC4.94□□□□□ -1.62
COPB1P53618 AC090116.1-201ENST00000615679 446 ntBASIC4.94□□□□□ -1.62
COPB1P53618 AL138721.1-201ENST00000616756 179 ntBASIC4.94□□□□□ -1.62
COPB1P53618 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
COPB1P53618 AC145207.9-201ENST00000623802 325 ntBASIC4.94□□□□□ -1.62
COPB1P53618 AC092608.3-201ENST00000625017 386 ntBASIC4.94□□□□□ -1.62
COPB1P53618 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.94□□□□□ -1.62
COPB1P53618 MIR4278-201ENST00000636094 69 ntBASIC4.94□□□□□ -1.62
COPB1P53618 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.94□□□□□ -1.62
COPB1P53618 OR51H2P-202ENST00000641424 3046 ntBASIC4.94□□□□□ -1.62
COPB1P53618 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.94□□□□□ -1.62
COPB1P53618 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.94□□□□□ -1.62
COPB1P53618 AC108467.2-201ENST00000617640 1597 ntBASIC4.94□□□□□ -1.62
COPB1P53618 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COPB1P53618 AC012618.3-205ENST00000637896 1496 ntBASIC4.94□□□□□ -1.62
COPB1P53618 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COPB1P53618 ZNF137P-201ENST00000456718 1920 ntBASIC4.93□□□□□ -1.62
COPB1P53618 AP000526.1-201ENST00000603308 1388 ntBASIC4.93□□□□□ -1.62
COPB1P53618 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COPB1P53618 AL590240.1-201ENST00000334118 313 ntBASIC4.93□□□□□ -1.62
COPB1P53618 RNU1-108P-201ENST00000362556 161 ntBASIC4.93□□□□□ -1.62
COPB1P53618 RNU4-24P-201ENST00000364565 139 ntBASIC4.93□□□□□ -1.62
COPB1P53618 RNU6-729P-201ENST00000384399 107 ntBASIC4.93□□□□□ -1.62
COPB1P53618 SNORD116-4-201ENST00000384733 96 ntBASIC4.93□□□□□ -1.62
COPB1P53618 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.93□□□□□ -1.62
COPB1P53618 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.93□□□□□ -1.62
COPB1P53618 AL807761.1-201ENST00000417622 171 ntBASIC4.93□□□□□ -1.62
COPB1P53618 UBTFL3-201ENST00000418934 1024 ntBASIC4.93□□□□□ -1.62
COPB1P53618 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.93□□□□□ -1.62
COPB1P53618 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.93□□□□□ -1.62
COPB1P53618 AL360081.1-201ENST00000428299 555 ntBASIC4.93□□□□□ -1.62
COPB1P53618 AL450263.2-201ENST00000439400 589 ntBASIC4.93□□□□□ -1.62
COPB1P53618 RPL23AP76-201ENST00000441860 458 ntBASIC4.93□□□□□ -1.62
COPB1P53618 DDX39BP2-208ENST00000453923 258 ntBASIC4.93□□□□□ -1.62
COPB1P53618 AC092324.1-201ENST00000468671 324 ntBASIC4.93□□□□□ -1.62
COPB1P53618 RPS26P28-201ENST00000470806 348 ntBASIC4.93□□□□□ -1.62
COPB1P53618 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.93□□□□□ -1.62
COPB1P53618 UBTFL6-201ENST00000477929 1024 ntBASIC4.93□□□□□ -1.62
COPB1P53618 AC104687.1-201ENST00000485829 412 ntBASIC4.93□□□□□ -1.62
COPB1P53618 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC4.93□□□□□ -1.62
COPB1P53618 AC111193.1-201ENST00000504097 155 ntBASIC4.93□□□□□ -1.62
COPB1P53618 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.93□□□□□ -1.62
COPB1P53618 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.93□□□□□ -1.62
COPB1P53618 AC021146.8-201ENST00000507455 733 ntBASIC4.93□□□□□ -1.62
COPB1P53618 OR51K1P-201ENST00000510214 950 ntBASIC4.93□□□□□ -1.62
COPB1P53618 IGKV2D-10-201ENST00000520194 281 ntBASIC4.93□□□□□ -1.62
COPB1P53618 IGJP1-201ENST00000522682 475 ntBASIC4.93□□□□□ -1.62
COPB1P53618 MTCO1P49-201ENST00000523429 802 ntBASIC4.93□□□□□ -1.62
COPB1P53618 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.93□□□□□ -1.62
COPB1P53618 AP000619.3-201ENST00000535634 1127 ntBASIC4.93□□□□□ -1.62
COPB1P53618 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.93□□□□□ -1.62
COPB1P53618 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.93□□□□□ -1.62
COPB1P53618 NIFKP8-201ENST00000560500 874 ntBASIC4.93□□□□□ -1.62
COPB1P53618 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.93□□□□□ -1.62
COPB1P53618 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.93□□□□□ -1.62
COPB1P53618 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.93□□□□□ -1.62
COPB1P53618 AC090616.2-202ENST00000584248 222 ntBASIC4.93□□□□□ -1.62
COPB1P53618 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.93□□□□□ -1.62
COPB1P53618 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.93□□□□□ -1.62
COPB1P53618 VN1R90P-201ENST00000595717 726 ntBASIC4.93□□□□□ -1.62
COPB1P53618 VN1R88P-201ENST00000596787 292 ntBASIC4.93□□□□□ -1.62
COPB1P53618 BNIP3P26-201ENST00000600827 554 ntBASIC4.93□□□□□ -1.62
COPB1P53618 AL137072.1-201ENST00000603444 466 ntBASIC4.93□□□□□ -1.62
COPB1P53618 AL031281.1-201ENST00000604049 488 ntBASIC4.93□□□□□ -1.62
COPB1P53618 AL160290.3-201ENST00000604869 165 ntBASIC4.93□□□□□ -1.62
COPB1P53618 OR2AS2P-201ENST00000606902 342 ntBASIC4.93□□□□□ -1.62
COPB1P53618 AC135507.1-201ENST00000607214 561 ntBASIC4.93□□□□□ -1.62
COPB1P53618 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.93□□□□□ -1.62
COPB1P53618 AC090425.2-201ENST00000608818 501 ntBASIC4.93□□□□□ -1.62
COPB1P53618 AL139418.1-201ENST00000613613 177 ntBASIC4.93□□□□□ -1.62
COPB1P53618 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.93□□□□□ -1.62
COPB1P53618 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
COPB1P53618 RN7SL722P-201ENST00000617780 284 ntBASIC4.93□□□□□ -1.62
COPB1P53618 RN7SL565P-201ENST00000618246 284 ntBASIC4.93□□□□□ -1.62
COPB1P53618 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.93□□□□□ -1.62
COPB1P53618 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.93□□□□□ -1.62
COPB1P53618 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
COPB1P53618 MTND4P31-201ENST00000425607 1343 ntBASIC4.93□□□□□ -1.62
COPB1P53618 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COPB1P53618 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
COPB1P53618 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COPB1P53618 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms