Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 ZNF826P-207ENST00000622273 1910 ntBASIC3.31□□□□□ -1.88
SRP9P49458 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SRP9P49458 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
SRP9P49458 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SRP9P49458 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
SRP9P49458 MIR1193-201ENST00000408109 78 ntBASIC3.3□□□□□ -1.88
SRP9P49458 SNORA3.3-201ENST00000408712 125 ntBASIC3.3□□□□□ -1.88
SRP9P49458 SNORA57.3-201ENST00000411095 141 ntBASIC3.3□□□□□ -1.88
SRP9P49458 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.3□□□□□ -1.88
SRP9P49458 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SRP9P49458 AC007064.3-201ENST00000422608 359 ntBASIC3.3□□□□□ -1.88
SRP9P49458 OR5AW1P-201ENST00000426334 1006 ntBASIC3.3□□□□□ -1.88
SRP9P49458 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.3□□□□□ -1.88
SRP9P49458 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.3□□□□□ -1.88
SRP9P49458 RPS20P32-201ENST00000456044 356 ntBASIC3.3□□□□□ -1.88
SRP9P49458 RPL23AP44-201ENST00000482216 473 ntBASIC3.3□□□□□ -1.88
SRP9P49458 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SRP9P49458 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.3□□□□□ -1.88
SRP9P49458 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
SRP9P49458 NDUFA5P2-201ENST00000519723 344 ntBASIC3.3□□□□□ -1.88
SRP9P49458 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.3□□□□□ -1.88
SRP9P49458 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.3□□□□□ -1.88
SRP9P49458 OR5D17P-201ENST00000531492 978 ntBASIC3.3□□□□□ -1.88
SRP9P49458 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.3□□□□□ -1.88
SRP9P49458 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.3□□□□□ -1.88
SRP9P49458 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.3□□□□□ -1.88
SRP9P49458 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.3□□□□□ -1.88
SRP9P49458 AL133247.2-201ENST00000603236 482 ntBASIC3.3□□□□□ -1.88
SRP9P49458 AC011816.2-201ENST00000607089 556 ntBASIC3.3□□□□□ -1.88
SRP9P49458 AL354760.1-201ENST00000608357 643 ntBASIC3.3□□□□□ -1.88
SRP9P49458 AP003400.2-201ENST00000624036 666 ntBASIC3.3□□□□□ -1.88
SRP9P49458 SNORA50A-202ENST00000629536 136 ntBASIC3.3□□□□□ -1.88
SRP9P49458 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.3□□□□□ -1.88
SRP9P49458 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SRP9P49458 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
SRP9P49458 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SRP9P49458 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SRP9P49458 RNU6-283P-201ENST00000364788 107 ntBASIC3.29□□□□□ -1.88
SRP9P49458 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.29□□□□□ -1.88
SRP9P49458 RNU6-213P-201ENST00000384051 104 ntBASIC3.29□□□□□ -1.88
SRP9P49458 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SRP9P49458 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.29□□□□□ -1.88
SRP9P49458 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.29□□□□□ -1.88
SRP9P49458 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.29□□□□□ -1.88
SRP9P49458 AP002884.2-201ENST00000471647 395 ntBASIC3.29□□□□□ -1.88
SRP9P49458 RPS3AP50-201ENST00000487064 803 ntBASIC3.29□□□□□ -1.88
SRP9P49458 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.29□□□□□ -1.88
SRP9P49458 PHBP14-201ENST00000512887 367 ntBASIC3.29□□□□□ -1.88
SRP9P49458 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.29□□□□□ -1.88
SRP9P49458 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.29□□□□□ -1.88
SRP9P49458 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.29□□□□□ -1.88
SRP9P49458 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SRP9P49458 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.29□□□□□ -1.88
SRP9P49458 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.29□□□□□ -1.88
SRP9P49458 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.29□□□□□ -1.88
SRP9P49458 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.29□□□□□ -1.88
SRP9P49458 AL354798.1-201ENST00000622505 329 ntBASIC3.29□□□□□ -1.88
SRP9P49458 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.29□□□□□ -1.88
SRP9P49458 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SRP9P49458 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SRP9P49458 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SRP9P49458 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SRP9P49458 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.28□□□□□ -1.88
SRP9P49458 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SRP9P49458 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
SRP9P49458 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SRP9P49458 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SRP9P49458 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.28□□□□□ -1.88
SRP9P49458 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SRP9P49458 MIR199A2-201ENST00000385289 110 ntBASIC3.28□□□□□ -1.88
SRP9P49458 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SRP9P49458 AL590704.1-201ENST00000402856 794 ntBASIC3.28□□□□□ -1.88
SRP9P49458 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.28□□□□□ -1.88
SRP9P49458 RPS7P5-201ENST00000441482 581 ntBASIC3.28□□□□□ -1.88
SRP9P49458 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.28□□□□□ -1.88
SRP9P49458 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.28□□□□□ -1.88
SRP9P49458 AC084198.1-201ENST00000477747 402 ntBASIC3.28□□□□□ -1.88
SRP9P49458 AL161747.1-201ENST00000480068 358 ntBASIC3.28□□□□□ -1.88
SRP9P49458 RN7SL323P-201ENST00000494712 295 ntBASIC3.28□□□□□ -1.88
SRP9P49458 PCBP2P3-201ENST00000509726 843 ntBASIC3.28□□□□□ -1.88
SRP9P49458 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.28□□□□□ -1.88
SRP9P49458 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.28□□□□□ -1.88
SRP9P49458 AC008489.1-201ENST00000524271 483 ntBASIC3.28□□□□□ -1.88
SRP9P49458 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SRP9P49458 AP004242.1-201ENST00000533701 349 ntBASIC3.28□□□□□ -1.88
SRP9P49458 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.28□□□□□ -1.88
SRP9P49458 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.28□□□□□ -1.88
SRP9P49458 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.28□□□□□ -1.88
SRP9P49458 AC067852.4-201ENST00000590314 478 ntBASIC3.28□□□□□ -1.88
SRP9P49458 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.28□□□□□ -1.88
SRP9P49458 AL020997.2-201ENST00000602607 184 ntBASIC3.28□□□□□ -1.88
SRP9P49458 AC099676.1-201ENST00000608886 657 ntBASIC3.28□□□□□ -1.88
SRP9P49458 AC005344.1-201ENST00000613391 459 ntBASIC3.28□□□□□ -1.88
SRP9P49458 AC025125.1-201ENST00000624743 1922 ntBASIC3.28□□□□□ -1.88
SRP9P49458 AC006042.3-201ENST00000454684 1469 ntBASIC3.28□□□□□ -1.88
SRP9P49458 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SRP9P49458 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
SRP9P49458 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SRP9P49458 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SRP9P49458 RAD1P1-201ENST00000231383 813 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms