Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.79□□□□□ -1.8
SHMT2P34897 AC004923.2-201ENST00000529649 369 ntBASIC3.79□□□□□ -1.8
SHMT2P34897 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC3.79□□□□□ -1.8
SHMT2P34897 CYCSP30-201ENST00000546447 172 ntBASIC3.79□□□□□ -1.8
SHMT2P34897 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.79□□□□□ -1.8
SHMT2P34897 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.79□□□□□ -1.8
SHMT2P34897 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.79□□□□□ -1.8
SHMT2P34897 AL109741.3-201ENST00000561748 592 ntBASIC3.79□□□□□ -1.8
SHMT2P34897 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.79□□□□□ -1.8
SHMT2P34897 AC093227.2-201ENST00000589357 285 ntBASIC3.79□□□□□ -1.8
SHMT2P34897 VN1R79P-201ENST00000593540 513 ntBASIC3.79□□□□□ -1.8
SHMT2P34897 AC015726.1-201ENST00000602353 681 ntBASIC3.79□□□□□ -1.8
SHMT2P34897 MRPS35P3-201ENST00000603189 709 ntBASIC3.79□□□□□ -1.8
SHMT2P34897 PSMA6P4-201ENST00000603247 718 ntBASIC3.79□□□□□ -1.8
SHMT2P34897 AL451086.1-201ENST00000605596 223 ntBASIC3.79□□□□□ -1.8
SHMT2P34897 AC090525.3-201ENST00000605601 189 ntBASIC3.79□□□□□ -1.8
SHMT2P34897 AL096803.3-201ENST00000609032 532 ntBASIC3.79□□□□□ -1.8
SHMT2P34897 AC055764.2-201ENST00000610089 670 ntBASIC3.79□□□□□ -1.8
SHMT2P34897 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.79□□□□□ -1.8
SHMT2P34897 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.79□□□□□ -1.8
SHMT2P34897 AF001550.2-201ENST00000636643 217 ntBASIC3.79□□□□□ -1.8
SHMT2P34897 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.79□□□□□ -1.8
SHMT2P34897 AL163152.1-201ENST00000642001 374 ntBASIC3.79□□□□□ -1.8
SHMT2P34897 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
SHMT2P34897 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
SHMT2P34897 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SHMT2P34897 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SHMT2P34897 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SHMT2P34897 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SHMT2P34897 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
SHMT2P34897 RNU1-64P-201ENST00000365443 163 ntBASIC3.78□□□□□ -1.8
SHMT2P34897 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SHMT2P34897 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.78□□□□□ -1.8
SHMT2P34897 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.78□□□□□ -1.8
SHMT2P34897 RNU6-452P-201ENST00000384406 107 ntBASIC3.78□□□□□ -1.8
SHMT2P34897 UBE2V1P15-201ENST00000407776 448 ntBASIC3.78□□□□□ -1.8
SHMT2P34897 AMD1P2-201ENST00000412936 992 ntBASIC3.78□□□□□ -1.8
SHMT2P34897 AC013404.1-201ENST00000413068 249 ntBASIC3.78□□□□□ -1.8
SHMT2P34897 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SHMT2P34897 MTND4P11-201ENST00000417020 1058 ntBASIC3.78□□□□□ -1.8
SHMT2P34897 ARL2BPP3-201ENST00000421226 480 ntBASIC3.78□□□□□ -1.8
SHMT2P34897 AC073464.3-201ENST00000422564 712 ntBASIC3.78□□□□□ -1.8
SHMT2P34897 MORF4L1P7-201ENST00000426038 703 ntBASIC3.78□□□□□ -1.8
SHMT2P34897 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.78□□□□□ -1.8
SHMT2P34897 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.78□□□□□ -1.8
SHMT2P34897 RPS29P7-201ENST00000439662 171 ntBASIC3.78□□□□□ -1.8
SHMT2P34897 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.78□□□□□ -1.8
SHMT2P34897 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.78□□□□□ -1.8
SHMT2P34897 AC007000.2-201ENST00000442564 487 ntBASIC3.78□□□□□ -1.8
SHMT2P34897 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.78□□□□□ -1.8
SHMT2P34897 MTND2P6-201ENST00000455337 1030 ntBASIC3.78□□□□□ -1.8
SHMT2P34897 CYCSP53-201ENST00000455540 265 ntBASIC3.78□□□□□ -1.8
SHMT2P34897 AL139099.1-201ENST00000497398 403 ntBASIC3.78□□□□□ -1.8
SHMT2P34897 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
SHMT2P34897 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.78□□□□□ -1.8
SHMT2P34897 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.78□□□□□ -1.8
SHMT2P34897 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
SHMT2P34897 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SHMT2P34897 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.78□□□□□ -1.8
SHMT2P34897 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.78□□□□□ -1.8
SHMT2P34897 AC092851.1-201ENST00000535964 478 ntBASIC3.78□□□□□ -1.8
SHMT2P34897 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.78□□□□□ -1.8
SHMT2P34897 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.78□□□□□ -1.8
SHMT2P34897 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.78□□□□□ -1.8
SHMT2P34897 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
SHMT2P34897 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.78□□□□□ -1.8
SHMT2P34897 AC135178.6-201ENST00000605314 398 ntBASIC3.78□□□□□ -1.8
SHMT2P34897 AC110792.4-201ENST00000609843 298 ntBASIC3.78□□□□□ -1.8
SHMT2P34897 MIR7973-1-201ENST00000614683 76 ntBASIC3.78□□□□□ -1.8
SHMT2P34897 AC139769.3-201ENST00000618383 175 ntBASIC3.78□□□□□ -1.8
SHMT2P34897 AL354798.1-201ENST00000622505 329 ntBASIC3.78□□□□□ -1.8
SHMT2P34897 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.78□□□□□ -1.8
SHMT2P34897 MAPK10-372ENST00000641954 3413 ntBASIC3.78□□□□□ -1.8
SHMT2P34897 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SHMT2P34897 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
SHMT2P34897 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.77□□□□□ -1.81
SHMT2P34897 AC096656.1-201ENST00000623826 1364 ntBASIC3.77□□□□□ -1.81
SHMT2P34897 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
SHMT2P34897 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
SHMT2P34897 LINC00561-201ENST00000565815 2738 ntBASIC3.77□□□□□ -1.81
SHMT2P34897 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SHMT2P34897 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SHMT2P34897 MIR423-201ENST00000362201 94 ntBASIC3.77□□□□□ -1.81
SHMT2P34897 Y_RNA.126-201ENST00000363382 111 ntBASIC3.77□□□□□ -1.81
SHMT2P34897 TCEA1P4-201ENST00000415066 844 ntBASIC3.77□□□□□ -1.81
SHMT2P34897 AL357078.2-201ENST00000416486 427 ntBASIC3.77□□□□□ -1.81
SHMT2P34897 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.77□□□□□ -1.81
SHMT2P34897 KCTD9P3-201ENST00000434597 1169 ntBASIC3.77□□□□□ -1.81
SHMT2P34897 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.77□□□□□ -1.81
SHMT2P34897 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.77□□□□□ -1.81
SHMT2P34897 RPL7P31-201ENST00000450192 724 ntBASIC3.77□□□□□ -1.81
SHMT2P34897 RPL23AP12-201ENST00000467573 473 ntBASIC3.77□□□□□ -1.81
SHMT2P34897 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.77□□□□□ -1.81
SHMT2P34897 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.77□□□□□ -1.81
SHMT2P34897 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.77□□□□□ -1.81
SHMT2P34897 AC026726.1-201ENST00000512859 601 ntBASIC3.77□□□□□ -1.81
SHMT2P34897 NPM1P41-201ENST00000512920 831 ntBASIC3.77□□□□□ -1.81
SHMT2P34897 AC026402.1-201ENST00000513642 170 ntBASIC3.77□□□□□ -1.81
SHMT2P34897 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC3.77□□□□□ -1.81
SHMT2P34897 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms