Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 SNORA71B-202ENST00000439232 272 ntBASIC2.89□□□□□ -1.95
HLA-DMBP28068 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC2.89□□□□□ -1.95
HLA-DMBP28068 AL606490.8-201ENST00000441624 319 ntBASIC2.89□□□□□ -1.95
HLA-DMBP28068 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC2.89□□□□□ -1.95
HLA-DMBP28068 RPL7P48-201ENST00000461513 746 ntBASIC2.89□□□□□ -1.95
HLA-DMBP28068 AC084198.1-201ENST00000477747 402 ntBASIC2.89□□□□□ -1.95
HLA-DMBP28068 AC023050.1-201ENST00000498198 304 ntBASIC2.89□□□□□ -1.95
HLA-DMBP28068 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC2.89□□□□□ -1.95
HLA-DMBP28068 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC2.89□□□□□ -1.95
HLA-DMBP28068 RN7SKP83-201ENST00000516512 178 ntBASIC2.89□□□□□ -1.95
HLA-DMBP28068 MED28P5-201ENST00000528254 438 ntBASIC2.89□□□□□ -1.95
HLA-DMBP28068 PDCL2P2-201ENST00000533651 189 ntBASIC2.89□□□□□ -1.95
HLA-DMBP28068 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC2.89□□□□□ -1.95
HLA-DMBP28068 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC2.89□□□□□ -1.95
HLA-DMBP28068 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC2.89□□□□□ -1.95
HLA-DMBP28068 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC2.89□□□□□ -1.95
HLA-DMBP28068 AC027281.1-201ENST00000574178 758 ntBASIC2.89□□□□□ -1.95
HLA-DMBP28068 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC2.89□□□□□ -1.95
HLA-DMBP28068 AC010680.4-201ENST00000605334 543 ntBASIC2.89□□□□□ -1.95
HLA-DMBP28068 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC2.89□□□□□ -1.95
HLA-DMBP28068 Xist_exon1.1-201ENST00000618930 85 ntBASIC2.89□□□□□ -1.95
HLA-DMBP28068 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
HLA-DMBP28068 CCT7-217ENST00000626868 249 ntTSL 5 BASIC2.89□□□□□ -1.95
HLA-DMBP28068 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC2.89□□□□□ -1.95
HLA-DMBP28068 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
HLA-DMBP28068 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC2.89□□□□□ -1.95
HLA-DMBP28068 USP33-201ENST00000357428 4155 ntTSL 5 BASIC2.89□□□□□ -1.95
HLA-DMBP28068 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
HLA-DMBP28068 FAM91A3P-201ENST00000456826 2544 ntBASIC2.89□□□□□ -1.95
HLA-DMBP28068 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HLA-DMBP28068 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HLA-DMBP28068 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC2.89□□□□□ -1.95
HLA-DMBP28068 CR381670.1-201ENST00000624291 1693 ntBASIC2.88□□□□□ -1.95
HLA-DMBP28068 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
HLA-DMBP28068 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
HLA-DMBP28068 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
HLA-DMBP28068 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
HLA-DMBP28068 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
HLA-DMBP28068 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
HLA-DMBP28068 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC2.88□□□□□ -1.95
HLA-DMBP28068 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
HLA-DMBP28068 U3.15-201ENST00000365398 212 ntBASIC2.88□□□□□ -1.95
HLA-DMBP28068 MIR554-201ENST00000384874 96 ntBASIC2.88□□□□□ -1.95
HLA-DMBP28068 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
HLA-DMBP28068 RPL30P2-201ENST00000414021 291 ntBASIC2.88□□□□□ -1.95
HLA-DMBP28068 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC2.88□□□□□ -1.95
HLA-DMBP28068 RPL21P109-201ENST00000422213 475 ntBASIC2.88□□□□□ -1.95
HLA-DMBP28068 USP9YP31-201ENST00000431405 881 ntBASIC2.88□□□□□ -1.95
HLA-DMBP28068 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC2.88□□□□□ -1.95
HLA-DMBP28068 AC245517.2-201ENST00000442890 346 ntBASIC2.88□□□□□ -1.95
HLA-DMBP28068 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC2.88□□□□□ -1.95
HLA-DMBP28068 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC2.88□□□□□ -1.95
HLA-DMBP28068 HMGB3P8-201ENST00000449709 577 ntBASIC2.88□□□□□ -1.95
HLA-DMBP28068 AC098824.1-201ENST00000453565 980 ntBASIC2.88□□□□□ -1.95
HLA-DMBP28068 DNAJC19P1-201ENST00000455312 319 ntBASIC2.88□□□□□ -1.95
HLA-DMBP28068 CFTRP1-201ENST00000456646 183 ntBASIC2.88□□□□□ -1.95
HLA-DMBP28068 RN7SL330P-201ENST00000469709 307 ntBASIC2.88□□□□□ -1.95
HLA-DMBP28068 AC091959.2-201ENST00000477363 321 ntBASIC2.88□□□□□ -1.95
HLA-DMBP28068 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC2.88□□□□□ -1.95
HLA-DMBP28068 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC2.88□□□□□ -1.95
HLA-DMBP28068 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC2.88□□□□□ -1.95
HLA-DMBP28068 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
HLA-DMBP28068 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC2.88□□□□□ -1.95
HLA-DMBP28068 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC2.88□□□□□ -1.95
HLA-DMBP28068 NPM1P41-201ENST00000512920 831 ntBASIC2.88□□□□□ -1.95
HLA-DMBP28068 AC023632.4-201ENST00000517783 191 ntBASIC2.88□□□□□ -1.95
HLA-DMBP28068 SUMO2P20-201ENST00000520803 283 ntBASIC2.88□□□□□ -1.95
HLA-DMBP28068 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
HLA-DMBP28068 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC2.88□□□□□ -1.95
HLA-DMBP28068 AL133457.1-201ENST00000564251 987 ntBASIC2.88□□□□□ -1.95
HLA-DMBP28068 MIR3186-201ENST00000577404 85 ntBASIC2.88□□□□□ -1.95
HLA-DMBP28068 AC067852.4-201ENST00000590314 478 ntBASIC2.88□□□□□ -1.95
HLA-DMBP28068 AC022146.1-201ENST00000595307 847 ntBASIC2.88□□□□□ -1.95
HLA-DMBP28068 AC015726.1-201ENST00000602353 681 ntBASIC2.88□□□□□ -1.95
HLA-DMBP28068 AC090912.3-201ENST00000609775 533 ntBASIC2.88□□□□□ -1.95
HLA-DMBP28068 AC099669.2-201ENST00000616549 437 ntBASIC2.88□□□□□ -1.95
HLA-DMBP28068 AC092628.2-201ENST00000622492 339 ntBASIC2.88□□□□□ -1.95
HLA-DMBP28068 AL356863.1-201ENST00000623378 1080 ntBASIC2.88□□□□□ -1.95
HLA-DMBP28068 AC034229.5-201ENST00000624258 185 ntBASIC2.88□□□□□ -1.95
HLA-DMBP28068 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC2.88□□□□□ -1.95
HLA-DMBP28068 CDRT1-208ENST00000630868 794 ntBASIC2.88□□□□□ -1.95
HLA-DMBP28068 U6.98-201ENST00000637157 84 ntBASIC2.88□□□□□ -1.95
HLA-DMBP28068 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC2.88□□□□□ -1.95
HLA-DMBP28068 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
HLA-DMBP28068 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC2.88□□□□□ -1.95
HLA-DMBP28068 AC073073.2-201ENST00000609827 2578 ntBASIC2.88□□□□□ -1.95
HLA-DMBP28068 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
HLA-DMBP28068 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.88□□□□□ -1.95
HLA-DMBP28068 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC2.87□□□□□ -1.95
HLA-DMBP28068 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
HLA-DMBP28068 HSP90AA5P-201ENST00000438353 2192 ntBASIC2.87□□□□□ -1.95
HLA-DMBP28068 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC2.87□□□□□ -1.95
HLA-DMBP28068 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
HLA-DMBP28068 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
HLA-DMBP28068 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
HLA-DMBP28068 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HLA-DMBP28068 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC2.87□□□□□ -1.95
HLA-DMBP28068 MTCO3P31-201ENST00000405526 789 ntBASIC2.87□□□□□ -1.95
HLA-DMBP28068 AC127526.1-201ENST00000417526 366 ntBASIC2.87□□□□□ -1.95
HLA-DMBP28068 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms