Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DMAP28067 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
HLA-DMAP28067 RNU1-132P-201ENST00000364300 164 ntBASIC3.3□□□□□ -1.88
HLA-DMAP28067 AP002088.1-201ENST00000382740 395 ntBASIC3.3□□□□□ -1.88
HLA-DMAP28067 RNU4-31P-201ENST00000384211 141 ntBASIC3.3□□□□□ -1.88
HLA-DMAP28067 MIR607-201ENST00000385241 96 ntBASIC3.3□□□□□ -1.88
HLA-DMAP28067 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.3□□□□□ -1.88
HLA-DMAP28067 SKINT1L-201ENST00000401057 817 ntBASIC3.3□□□□□ -1.88
HLA-DMAP28067 HSPE1P12-201ENST00000412576 301 ntBASIC3.3□□□□□ -1.88
HLA-DMAP28067 EI24P1-201ENST00000416584 867 ntBASIC3.3□□□□□ -1.88
HLA-DMAP28067 AC069213.2-201ENST00000420238 366 ntBASIC3.3□□□□□ -1.88
HLA-DMAP28067 RPL17P36-201ENST00000420302 549 ntBASIC3.3□□□□□ -1.88
HLA-DMAP28067 AJ239321.1-201ENST00000424255 564 ntBASIC3.3□□□□□ -1.88
HLA-DMAP28067 OR5BE1P-201ENST00000425977 939 ntBASIC3.3□□□□□ -1.88
HLA-DMAP28067 AC006989.1-201ENST00000427212 131 ntBASIC3.3□□□□□ -1.88
HLA-DMAP28067 RPS29P17-201ENST00000430795 166 ntBASIC3.3□□□□□ -1.88
HLA-DMAP28067 AL627308.1-201ENST00000435693 821 ntBASIC3.3□□□□□ -1.88
HLA-DMAP28067 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC3.3□□□□□ -1.88
HLA-DMAP28067 AC073264.2-201ENST00000448886 166 ntBASIC3.3□□□□□ -1.88
HLA-DMAP28067 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.3□□□□□ -1.88
HLA-DMAP28067 NPM1P17-201ENST00000479221 602 ntBASIC3.3□□□□□ -1.88
HLA-DMAP28067 RPS4XP14-201ENST00000493072 781 ntBASIC3.3□□□□□ -1.88
HLA-DMAP28067 AC093755.1-201ENST00000512950 1023 ntBASIC3.3□□□□□ -1.88
HLA-DMAP28067 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.3□□□□□ -1.88
HLA-DMAP28067 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.3□□□□□ -1.88
HLA-DMAP28067 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DMAP28067 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC3.3□□□□□ -1.88
HLA-DMAP28067 AC037471.2-201ENST00000564941 598 ntBASIC3.3□□□□□ -1.88
HLA-DMAP28067 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.3□□□□□ -1.88
HLA-DMAP28067 AP000919.1-202ENST00000581139 1264 ntBASIC3.3□□□□□ -1.88
HLA-DMAP28067 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC3.3□□□□□ -1.88
HLA-DMAP28067 AC006254.3-201ENST00000603353 884 ntBASIC3.3□□□□□ -1.88
HLA-DMAP28067 AL161616.1-201ENST00000611867 286 ntBASIC3.3□□□□□ -1.88
HLA-DMAP28067 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DMAP28067 MIR7155-201ENST00000615925 56 ntBASIC3.3□□□□□ -1.88
HLA-DMAP28067 MIR7151-201ENST00000617477 60 ntBASIC3.3□□□□□ -1.88
HLA-DMAP28067 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC3.3□□□□□ -1.88
HLA-DMAP28067 AL355480.1-201ENST00000629041 99 ntBASIC3.3□□□□□ -1.88
HLA-DMAP28067 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
HLA-DMAP28067 OR5BE1P-202ENST00000641168 1176 ntBASIC3.3□□□□□ -1.88
HLA-DMAP28067 AC022031.1-201ENST00000585985 2593 ntBASIC3.3□□□□□ -1.88
HLA-DMAP28067 CR788268.1-201ENST00000603931 1809 ntBASIC3.3□□□□□ -1.88
HLA-DMAP28067 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DMAP28067 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DMAP28067 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DMAP28067 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DMAP28067 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
HLA-DMAP28067 MTND4P31-201ENST00000425607 1343 ntBASIC3.29□□□□□ -1.88
HLA-DMAP28067 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DMAP28067 RNA5SP399-201ENST00000364003 117 ntBASIC3.29□□□□□ -1.88
HLA-DMAP28067 AP000567.1-201ENST00000406413 156 ntBASIC3.29□□□□□ -1.88
HLA-DMAP28067 DHFRP5-201ENST00000406944 564 ntBASIC3.29□□□□□ -1.88
HLA-DMAP28067 RNU6-564P-201ENST00000410983 104 ntBASIC3.29□□□□□ -1.88
HLA-DMAP28067 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DMAP28067 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DMAP28067 BX510359.3-201ENST00000422168 306 ntBASIC3.29□□□□□ -1.88
HLA-DMAP28067 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DMAP28067 TXNP2-201ENST00000443918 295 ntBASIC3.29□□□□□ -1.88
HLA-DMAP28067 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DMAP28067 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DMAP28067 AC125238.1-201ENST00000448842 249 ntBASIC3.29□□□□□ -1.88
HLA-DMAP28067 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DMAP28067 RPL23AP24-201ENST00000458203 385 ntBASIC3.29□□□□□ -1.88
HLA-DMAP28067 FCF1P3-201ENST00000496394 590 ntBASIC3.29□□□□□ -1.88
HLA-DMAP28067 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.29□□□□□ -1.88
HLA-DMAP28067 AC005351.1-201ENST00000511152 786 ntBASIC3.29□□□□□ -1.88
HLA-DMAP28067 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.29□□□□□ -1.88
HLA-DMAP28067 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DMAP28067 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DMAP28067 AL049874.4-201ENST00000557593 255 ntBASIC3.29□□□□□ -1.88
HLA-DMAP28067 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DMAP28067 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DMAP28067 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.29□□□□□ -1.88
HLA-DMAP28067 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DMAP28067 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.29□□□□□ -1.88
HLA-DMAP28067 BNIP3P7-201ENST00000605641 516 ntBASIC3.29□□□□□ -1.88
HLA-DMAP28067 MIR6780A-201ENST00000615089 68 ntBASIC3.29□□□□□ -1.88
HLA-DMAP28067 MIR8058-201ENST00000615737 89 ntBASIC3.29□□□□□ -1.88
HLA-DMAP28067 AC091953.3-201ENST00000623220 236 ntBASIC3.29□□□□□ -1.88
HLA-DMAP28067 AC092184.1-201ENST00000625042 715 ntBASIC3.29□□□□□ -1.88
HLA-DMAP28067 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC3.29□□□□□ -1.88
HLA-DMAP28067 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC3.29□□□□□ -1.88
HLA-DMAP28067 MIR4496-201ENST00000635896 61 ntBASIC3.29□□□□□ -1.88
HLA-DMAP28067 AL137100.1-201ENST00000556703 1620 ntBASIC3.29□□□□□ -1.88
HLA-DMAP28067 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
HLA-DMAP28067 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DMAP28067 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.29□□□□□ -1.88
HLA-DMAP28067 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
HLA-DMAP28067 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.28□□□□□ -1.88
HLA-DMAP28067 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
HLA-DMAP28067 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.28□□□□□ -1.88
HLA-DMAP28067 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.28□□□□□ -1.88
HLA-DMAP28067 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DMAP28067 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
HLA-DMAP28067 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DMAP28067 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DMAP28067 RNU4-23P-201ENST00000362839 140 ntBASIC3.28□□□□□ -1.88
HLA-DMAP28067 DNAJC19P6-201ENST00000401853 280 ntBASIC3.28□□□□□ -1.88
HLA-DMAP28067 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DMAP28067 GTF2IP23-201ENST00000423746 351 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms