Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 HMGB3P14-201ENST00000494195 599 ntBASIC3.21□□□□□ -1.9
CTLA4P16410 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.21□□□□□ -1.9
CTLA4P16410 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.21□□□□□ -1.9
CTLA4P16410 AC117525.1-201ENST00000515228 503 ntBASIC3.21□□□□□ -1.9
CTLA4P16410 RN7SKP21-201ENST00000516503 220 ntBASIC3.21□□□□□ -1.9
CTLA4P16410 SEC11B-201ENST00000518383 499 ntBASIC3.21□□□□□ -1.9
CTLA4P16410 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.21□□□□□ -1.9
CTLA4P16410 AC022790.1-201ENST00000522872 204 ntBASIC3.21□□□□□ -1.9
CTLA4P16410 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.21□□□□□ -1.9
CTLA4P16410 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC3.21□□□□□ -1.9
CTLA4P16410 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.21□□□□□ -1.9
CTLA4P16410 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.21□□□□□ -1.9
CTLA4P16410 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.21□□□□□ -1.9
CTLA4P16410 MIR5685-201ENST00000579080 79 ntBASIC3.21□□□□□ -1.9
CTLA4P16410 AC067852.4-201ENST00000590314 478 ntBASIC3.21□□□□□ -1.9
CTLA4P16410 AC244505.7-201ENST00000599675 272 ntBASIC3.21□□□□□ -1.9
CTLA4P16410 AC005229.3-201ENST00000603438 323 ntBASIC3.21□□□□□ -1.9
CTLA4P16410 AC006077.1-201ENST00000604746 343 ntBASIC3.21□□□□□ -1.9
CTLA4P16410 uc_338.32-201ENST00000615087 172 ntBASIC3.21□□□□□ -1.9
CTLA4P16410 AC016717.3-201ENST00000624730 554 ntBASIC3.21□□□□□ -1.9
CTLA4P16410 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.21□□□□□ -1.9
CTLA4P16410 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CTLA4P16410 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.2□□□□□ -1.9
CTLA4P16410 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.2□□□□□ -1.9
CTLA4P16410 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CTLA4P16410 AC087565.3-202ENST00000642085 1603 ntBASIC3.2□□□□□ -1.9
CTLA4P16410 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.2□□□□□ -1.9
CTLA4P16410 MIR423-201ENST00000362201 94 ntBASIC3.2□□□□□ -1.9
CTLA4P16410 RNA5SP515-201ENST00000364570 118 ntBASIC3.2□□□□□ -1.9
CTLA4P16410 U3.15-201ENST00000365398 212 ntBASIC3.2□□□□□ -1.9
CTLA4P16410 RNA5SP235-201ENST00000365411 114 ntBASIC3.2□□□□□ -1.9
CTLA4P16410 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.2□□□□□ -1.9
CTLA4P16410 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CTLA4P16410 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CTLA4P16410 RN7SKP263-201ENST00000411194 309 ntBASIC3.2□□□□□ -1.9
CTLA4P16410 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.2□□□□□ -1.9
CTLA4P16410 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC3.2□□□□□ -1.9
CTLA4P16410 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CTLA4P16410 AC245054.1-201ENST00000420944 258 ntBASIC3.2□□□□□ -1.9
CTLA4P16410 RPL7P53-201ENST00000421245 739 ntBASIC3.2□□□□□ -1.9
CTLA4P16410 SDCBPP2-201ENST00000424643 885 ntBASIC3.2□□□□□ -1.9
CTLA4P16410 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.2□□□□□ -1.9
CTLA4P16410 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.2□□□□□ -1.9
CTLA4P16410 ANP32BP2-201ENST00000454525 545 ntBASIC3.2□□□□□ -1.9
CTLA4P16410 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.2□□□□□ -1.9
CTLA4P16410 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.2□□□□□ -1.9
CTLA4P16410 AC020593.1-201ENST00000507399 299 ntBASIC3.2□□□□□ -1.9
CTLA4P16410 PRELID3BP5-201ENST00000508612 460 ntBASIC3.2□□□□□ -1.9
CTLA4P16410 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
CTLA4P16410 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.2□□□□□ -1.9
CTLA4P16410 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CTLA4P16410 NPM1P41-201ENST00000512920 831 ntBASIC3.2□□□□□ -1.9
CTLA4P16410 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.2□□□□□ -1.9
CTLA4P16410 AC092593.2-201ENST00000513866 913 ntBASIC3.2□□□□□ -1.9
CTLA4P16410 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.2□□□□□ -1.9
CTLA4P16410 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.2□□□□□ -1.9
CTLA4P16410 RFPL1S-203ENST00000539579 330 ntBASIC3.2□□□□□ -1.9
CTLA4P16410 AC084033.1-201ENST00000550830 633 ntBASIC3.2□□□□□ -1.9
CTLA4P16410 CBX3P5-201ENST00000552017 521 ntBASIC3.2□□□□□ -1.9
CTLA4P16410 MIR3160-1-201ENST00000577972 85 ntBASIC3.2□□□□□ -1.9
CTLA4P16410 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.2□□□□□ -1.9
CTLA4P16410 VN1R79P-201ENST00000593540 513 ntBASIC3.2□□□□□ -1.9
CTLA4P16410 AC099676.1-201ENST00000608886 657 ntBASIC3.2□□□□□ -1.9
CTLA4P16410 AC068831.8-201ENST00000620171 435 ntBASIC3.2□□□□□ -1.9
CTLA4P16410 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.2□□□□□ -1.9
CTLA4P16410 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.2□□□□□ -1.9
CTLA4P16410 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
CTLA4P16410 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.2□□□□□ -1.9
CTLA4P16410 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CTLA4P16410 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CTLA4P16410 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
CTLA4P16410 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CTLA4P16410 AC138393.1-206ENST00000540997 1886 ntBASIC3.2□□□□□ -1.9
CTLA4P16410 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
CTLA4P16410 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
CTLA4P16410 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CTLA4P16410 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CTLA4P16410 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CTLA4P16410 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CTLA4P16410 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CTLA4P16410 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.19□□□□□ -1.9
CTLA4P16410 U8.11-201ENST00000384699 133 ntBASIC3.19□□□□□ -1.9
CTLA4P16410 U8.12-201ENST00000384701 133 ntBASIC3.19□□□□□ -1.9
CTLA4P16410 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CTLA4P16410 SNORA57.3-201ENST00000411095 141 ntBASIC3.19□□□□□ -1.9
CTLA4P16410 RHEBP3-201ENST00000411920 351 ntBASIC3.19□□□□□ -1.9
CTLA4P16410 CYP4F29P-201ENST00000420685 446 ntBASIC3.19□□□□□ -1.9
CTLA4P16410 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.19□□□□□ -1.9
CTLA4P16410 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.19□□□□□ -1.9
CTLA4P16410 C1DP3-201ENST00000455013 423 ntBASIC3.19□□□□□ -1.9
CTLA4P16410 U8.18-201ENST00000459285 133 ntBASIC3.19□□□□□ -1.9
CTLA4P16410 AC106872.2-201ENST00000494303 480 ntBASIC3.19□□□□□ -1.9
CTLA4P16410 AC092045.1-201ENST00000495716 1231 ntBASIC3.19□□□□□ -1.9
CTLA4P16410 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC3.19□□□□□ -1.9
CTLA4P16410 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.19□□□□□ -1.9
CTLA4P16410 AC021146.1-201ENST00000511202 716 ntBASIC3.19□□□□□ -1.9
CTLA4P16410 RNU6-579P-201ENST00000516879 102 ntBASIC3.19□□□□□ -1.9
CTLA4P16410 AP006245.1-201ENST00000522549 120 ntBASIC3.19□□□□□ -1.9
CTLA4P16410 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.19□□□□□ -1.9
CTLA4P16410 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms