Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 CR383658.2-201ENST00000547576 1525 ntBASIC5.83□□□□□ -1.48
TOP2AP11388 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TOP2AP11388 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TOP2AP11388 AC005229.2-201ENST00000456995 399 ntBASIC5.83□□□□□ -1.48
TOP2AP11388 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
TOP2AP11388 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.83□□□□□ -1.48
TOP2AP11388 AC006363.1-201ENST00000603806 463 ntBASIC5.83□□□□□ -1.48
TOP2AP11388 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC5.82□□□□□ -1.48
TOP2AP11388 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.82□□□□□ -1.48
TOP2AP11388 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TOP2AP11388 HSPA8P17-201ENST00000427029 1382 ntBASIC5.82□□□□□ -1.48
TOP2AP11388 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
TOP2AP11388 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC5.82□□□□□ -1.48
TOP2AP11388 GNG5P5-201ENST00000420444 220 ntBASIC5.82□□□□□ -1.48
TOP2AP11388 USP9YP36-201ENST00000424581 829 ntBASIC5.82□□□□□ -1.48
TOP2AP11388 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC5.82□□□□□ -1.48
TOP2AP11388 NANOGP6-201ENST00000429190 847 ntBASIC5.82□□□□□ -1.48
TOP2AP11388 USP9YP31-201ENST00000431405 881 ntBASIC5.82□□□□□ -1.48
TOP2AP11388 AL139132.1-201ENST00000431587 344 ntBASIC5.82□□□□□ -1.48
TOP2AP11388 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC5.82□□□□□ -1.48
TOP2AP11388 RPS3AP50-201ENST00000487064 803 ntBASIC5.82□□□□□ -1.48
TOP2AP11388 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
TOP2AP11388 FTH1P11-201ENST00000517577 551 ntBASIC5.82□□□□□ -1.48
TOP2AP11388 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC5.82□□□□□ -1.48
TOP2AP11388 AC005242.1-201ENST00000585658 438 ntBASIC5.82□□□□□ -1.48
TOP2AP11388 AL049840.6-202ENST00000603373 279 ntBASIC5.82□□□□□ -1.48
TOP2AP11388 AC015813.4-201ENST00000610469 179 ntBASIC5.82□□□□□ -1.48
TOP2AP11388 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
TOP2AP11388 AC083843.2-201ENST00000568248 6253 ntBASIC5.81□□□□□ -1.48
TOP2AP11388 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TOP2AP11388 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
TOP2AP11388 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TOP2AP11388 RNA5SP39-201ENST00000411245 120 ntBASIC5.81□□□□□ -1.48
TOP2AP11388 AC006028.1-201ENST00000438379 402 ntBASIC5.81□□□□□ -1.48
TOP2AP11388 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC5.81□□□□□ -1.48
TOP2AP11388 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC5.81□□□□□ -1.48
TOP2AP11388 AC008885.1-201ENST00000514930 301 ntBASIC5.81□□□□□ -1.48
TOP2AP11388 AL157817.1-201ENST00000614264 790 ntBASIC5.81□□□□□ -1.48
TOP2AP11388 AL157762.1-201ENST00000619612 415 ntBASIC5.81□□□□□ -1.48
TOP2AP11388 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TOP2AP11388 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TOP2AP11388 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.81□□□□□ -1.48
TOP2AP11388 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC5.81□□□□□ -1.48
TOP2AP11388 SAGE4P-201ENST00000442271 3381 ntBASIC5.81□□□□□ -1.48
TOP2AP11388 AL513302.2-201ENST00000562313 1842 ntBASIC5.81□□□□□ -1.48
TOP2AP11388 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.8□□□□□ -1.48
TOP2AP11388 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
TOP2AP11388 CRP-203ENST00000368111 512 ntTSL 3 BASIC5.8□□□□□ -1.48
TOP2AP11388 TEX41-209ENST00000451478 452 ntTSL 2 BASIC5.8□□□□□ -1.48
TOP2AP11388 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.8□□□□□ -1.48
TOP2AP11388 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC5.8□□□□□ -1.48
TOP2AP11388 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.8□□□□□ -1.48
TOP2AP11388 AC233702.9-201ENST00000581528 203 ntBASIC5.8□□□□□ -1.48
TOP2AP11388 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TOP2AP11388 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
TOP2AP11388 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TOP2AP11388 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
TOP2AP11388 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC5.79□□□□□ -1.48
TOP2AP11388 RNU4ATAC17P-201ENST00000517272 120 ntBASIC5.79□□□□□ -1.48
TOP2AP11388 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC5.79□□□□□ -1.48
TOP2AP11388 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC5.79□□□□□ -1.48
TOP2AP11388 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC5.79□□□□□ -1.48
TOP2AP11388 AC074276.2-201ENST00000619891 348 ntBASIC5.79□□□□□ -1.48
TOP2AP11388 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.79□□□□□ -1.48
TOP2AP11388 BCLAF1P1-201ENST00000505813 2752 ntBASIC5.79□□□□□ -1.48
TOP2AP11388 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TOP2AP11388 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC5.79□□□□□ -1.48
TOP2AP11388 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
TOP2AP11388 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.79□□□□□ -1.48
TOP2AP11388 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TOP2AP11388 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TOP2AP11388 MIR422A-201ENST00000362286 90 ntBASIC5.79□□□□□ -1.48
TOP2AP11388 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.79□□□□□ -1.48
TOP2AP11388 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC5.79□□□□□ -1.48
TOP2AP11388 AC006518.1-201ENST00000541449 943 ntBASIC5.79□□□□□ -1.48
TOP2AP11388 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.79□□□□□ -1.48
TOP2AP11388 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TOP2AP11388 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TOP2AP11388 AC073073.2-201ENST00000609827 2578 ntBASIC5.78□□□□□ -1.48
TOP2AP11388 DPPA2P2-201ENST00000418220 897 ntBASIC5.78□□□□□ -1.48
TOP2AP11388 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC5.78□□□□□ -1.48
TOP2AP11388 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.78□□□□□ -1.48
TOP2AP11388 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC5.78□□□□□ -1.48
TOP2AP11388 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC5.78□□□□□ -1.48
TOP2AP11388 MYL12AP1-201ENST00000518490 515 ntBASIC5.78□□□□□ -1.48
TOP2AP11388 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TOP2AP11388 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC5.78□□□□□ -1.48
TOP2AP11388 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC5.78□□□□□ -1.48
TOP2AP11388 AF117829.1-206ENST00000621883 3802 ntBASIC5.78□□□□□ -1.48
TOP2AP11388 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TOP2AP11388 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC5.77□□□□□ -1.49
TOP2AP11388 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
TOP2AP11388 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
TOP2AP11388 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
TOP2AP11388 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TOP2AP11388 REREP1Y-201ENST00000422655 198 ntBASIC5.77□□□□□ -1.49
TOP2AP11388 HSPE1P16-201ENST00000426640 348 ntBASIC5.77□□□□□ -1.49
TOP2AP11388 REREP2Y-201ENST00000439103 200 ntBASIC5.77□□□□□ -1.49
TOP2AP11388 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TOP2AP11388 MTND6P5-201ENST00000448266 512 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms