Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 CYCSP1-201ENST00000604815 315 ntBASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 AL590282.1-201ENST00000610379 1136 ntBASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 AC144833.1-201ENST00000567953 4089 ntBASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 CYP1D1P-201ENST00000416662 1433 ntBASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC7.34□□□□□ -1.24
CSB-PGBD3P0DP91 TRIM51GP-201ENST00000534741 1350 ntBASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 AC090017.1-201ENST00000548612 1779 ntBASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 CCT4P2-201ENST00000233836 1548 ntBASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 RNU6-462P-201ENST00000362659 105 ntBASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 RNU4-79P-201ENST00000362764 141 ntBASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 HYKK-202ENST00000408962 847 ntTSL 5 BASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 MTCO1P20-201ENST00000425366 358 ntBASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 RBMY2QP-201ENST00000429799 1147 ntBASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 HIGD1AP8-201ENST00000453927 274 ntBASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 RPS15AP1-201ENST00000457423 391 ntBASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 AC023818.1-201ENST00000498379 384 ntBASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 NAF1-205ENST00000509434 385 ntTSL 3 BASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 EIF3KP3-201ENST00000514461 639 ntBASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 RNA5SP216-201ENST00000516111 123 ntBASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 Y_RNA.704-201ENST00000516851 102 ntBASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 MTND1P35-201ENST00000526739 508 ntBASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 RGS5-219ENST00000528019 512 ntTSL 4 BASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 PSMA3P-201ENST00000555485 635 ntBASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 AC127381.1-201ENST00000555979 939 ntBASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 HYKK-203ENST00000563233 734 ntTSL 2 BASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 MIR4433B-201ENST00000581329 102 ntBASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 MIR4480-201ENST00000582492 71 ntBASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 AC017100.2-201ENST00000584628 355 ntBASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 AC073091.2-201ENST00000603205 907 ntBASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 AC079684.1-201ENST00000621405 437 ntBASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 AC140479.2-201ENST00000421567 3130 ntBASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
CSB-PGBD3P0DP91 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 RNU6-251P-201ENST00000363235 104 ntBASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 Y_RNA.296-201ENST00000364930 108 ntBASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 RNA5SP91-201ENST00000390902 119 ntBASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 HMGB1P11-201ENST00000413899 637 ntBASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 AC093655.2-201ENST00000425735 631 ntBASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 AL451074.3-201ENST00000437709 472 ntBASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 153.3 ms