Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AL139247.1-201ENST00000422768 325 ntBASIC3.77□□□□□ -1.81
HOXC4P09017 DPY19L1P2-201ENST00000426647 915 ntBASIC3.77□□□□□ -1.81
HOXC4P09017 AL050321.1-201ENST00000432363 400 ntBASIC3.77□□□□□ -1.81
HOXC4P09017 ATP5HP2-201ENST00000433885 485 ntBASIC3.77□□□□□ -1.81
HOXC4P09017 ELOCP18-201ENST00000434209 337 ntBASIC3.77□□□□□ -1.81
HOXC4P09017 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXC4P09017 MTCYBP12-201ENST00000440559 1134 ntBASIC3.77□□□□□ -1.81
HOXC4P09017 TPTE2P3-201ENST00000441562 1189 ntBASIC3.77□□□□□ -1.81
HOXC4P09017 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.77□□□□□ -1.81
HOXC4P09017 SETD6P1-201ENST00000444575 317 ntBASIC3.77□□□□□ -1.81
HOXC4P09017 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HOXC4P09017 RNU7-27P-201ENST00000459281 62 ntBASIC3.77□□□□□ -1.81
HOXC4P09017 MTND6P6-201ENST00000478031 263 ntBASIC3.77□□□□□ -1.81
HOXC4P09017 ACTR3P3-201ENST00000480448 893 ntBASIC3.77□□□□□ -1.81
HOXC4P09017 UBE2CP3-201ENST00000502715 450 ntBASIC3.77□□□□□ -1.81
HOXC4P09017 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXC4P09017 MTND3P3-201ENST00000505004 126 ntBASIC3.77□□□□□ -1.81
HOXC4P09017 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.77□□□□□ -1.81
HOXC4P09017 MTND1P36-201ENST00000522384 936 ntBASIC3.77□□□□□ -1.81
HOXC4P09017 AL731537.2-201ENST00000561565 951 ntBASIC3.77□□□□□ -1.81
HOXC4P09017 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HOXC4P09017 RNU1-30P-201ENST00000606575 163 ntBASIC3.77□□□□□ -1.81
HOXC4P09017 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.77□□□□□ -1.81
HOXC4P09017 AP000240.1-201ENST00000609910 452 ntBASIC3.77□□□□□ -1.81
HOXC4P09017 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXC4P09017 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXC4P09017 AC103858.2-201ENST00000621471 543 ntBASIC3.77□□□□□ -1.81
HOXC4P09017 AP006248.2-201ENST00000623309 592 ntBASIC3.77□□□□□ -1.81
HOXC4P09017 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HOXC4P09017 ATE1-AS1-202ENST00000636460 506 ntBASIC3.77□□□□□ -1.81
HOXC4P09017 AC091948.2-201ENST00000636510 279 ntBASIC3.77□□□□□ -1.81
HOXC4P09017 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXC4P09017 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HOXC4P09017 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HOXC4P09017 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
HOXC4P09017 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HOXC4P09017 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HOXC4P09017 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
HOXC4P09017 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HOXC4P09017 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
HOXC4P09017 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HOXC4P09017 AC106871.1-201ENST00000568324 3102 ntBASIC3.76□□□□□ -1.81
HOXC4P09017 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
HOXC4P09017 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HOXC4P09017 AC024560.2-201ENST00000507981 1497 ntBASIC3.76□□□□□ -1.81
HOXC4P09017 RNU6-666P-201ENST00000363499 107 ntBASIC3.76□□□□□ -1.81
HOXC4P09017 RNA5SP498-201ENST00000411342 120 ntBASIC3.76□□□□□ -1.81
HOXC4P09017 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.76□□□□□ -1.81
HOXC4P09017 MTND2P15-201ENST00000418575 892 ntBASIC3.76□□□□□ -1.81
HOXC4P09017 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.76□□□□□ -1.81
HOXC4P09017 AC073464.3-201ENST00000422564 712 ntBASIC3.76□□□□□ -1.81
HOXC4P09017 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.76□□□□□ -1.81
HOXC4P09017 OR5AW1P-201ENST00000426334 1006 ntBASIC3.76□□□□□ -1.81
HOXC4P09017 AP000949.1-201ENST00000438328 629 ntBASIC3.76□□□□□ -1.81
HOXC4P09017 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.76□□□□□ -1.81
HOXC4P09017 HMGB1P16-201ENST00000447155 540 ntBASIC3.76□□□□□ -1.81
HOXC4P09017 AC005229.2-201ENST00000456995 399 ntBASIC3.76□□□□□ -1.81
HOXC4P09017 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.76□□□□□ -1.81
HOXC4P09017 AC068305.1-201ENST00000497406 726 ntBASIC3.76□□□□□ -1.81
HOXC4P09017 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.76□□□□□ -1.81
HOXC4P09017 TRMT10BP1-201ENST00000519377 943 ntBASIC3.76□□□□□ -1.81
HOXC4P09017 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.76□□□□□ -1.81
HOXC4P09017 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.76□□□□□ -1.81
HOXC4P09017 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.76□□□□□ -1.81
HOXC4P09017 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.76□□□□□ -1.81
HOXC4P09017 AC122134.1-202ENST00000569111 1201 ntBASIC3.76□□□□□ -1.81
HOXC4P09017 AC022884.3-201ENST00000579571 248 ntBASIC3.76□□□□□ -1.81
HOXC4P09017 MIR4716-201ENST00000579628 84 ntBASIC3.76□□□□□ -1.81
HOXC4P09017 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC3.76□□□□□ -1.81
HOXC4P09017 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.76□□□□□ -1.81
HOXC4P09017 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.76□□□□□ -1.81
HOXC4P09017 AL133247.2-201ENST00000603236 482 ntBASIC3.76□□□□□ -1.81
HOXC4P09017 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC3.76□□□□□ -1.81
HOXC4P09017 AC012603.1-201ENST00000606424 528 ntBASIC3.76□□□□□ -1.81
HOXC4P09017 AL354760.1-201ENST00000608357 643 ntBASIC3.76□□□□□ -1.81
HOXC4P09017 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.76□□□□□ -1.81
HOXC4P09017 AL391497.1-201ENST00000608671 547 ntBASIC3.76□□□□□ -1.81
HOXC4P09017 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HOXC4P09017 AL138960.2-201ENST00000625145 535 ntBASIC3.76□□□□□ -1.81
HOXC4P09017 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.76□□□□□ -1.81
HOXC4P09017 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
HOXC4P09017 AL592437.2-201ENST00000421655 2434 ntBASIC3.76□□□□□ -1.81
HOXC4P09017 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HOXC4P09017 AL118496.1-201ENST00000440201 1812 ntBASIC3.76□□□□□ -1.81
HOXC4P09017 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HOXC4P09017 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.76□□□□□ -1.81
HOXC4P09017 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HOXC4P09017 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HOXC4P09017 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.75□□□□□ -1.81
HOXC4P09017 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
HOXC4P09017 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.75□□□□□ -1.81
HOXC4P09017 AC007685.1-201ENST00000329806 452 ntBASIC3.75□□□□□ -1.81
HOXC4P09017 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.75□□□□□ -1.81
HOXC4P09017 MIR449B-201ENST00000384995 97 ntBASIC3.75□□□□□ -1.81
HOXC4P09017 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
HOXC4P09017 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.75□□□□□ -1.81
HOXC4P09017 OR4F13P-201ENST00000428478 931 ntBASIC3.75□□□□□ -1.81
HOXC4P09017 AC073069.1-201ENST00000428657 441 ntBASIC3.75□□□□□ -1.81
HOXC4P09017 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.75□□□□□ -1.81
HOXC4P09017 AL590762.3-201ENST00000436372 640 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms