Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.35□□□□□ -1.55
HLA-DOAP06340 AC109927.2-201ENST00000506416 303 ntBASIC5.35□□□□□ -1.55
HLA-DOAP06340 AC116353.3-201ENST00000511215 249 ntBASIC5.35□□□□□ -1.55
HLA-DOAP06340 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.35□□□□□ -1.55
HLA-DOAP06340 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC5.35□□□□□ -1.55
HLA-DOAP06340 AC002400.1-201ENST00000569310 726 ntBASIC5.35□□□□□ -1.55
HLA-DOAP06340 SS18L2P2-201ENST00000583960 235 ntBASIC5.35□□□□□ -1.55
HLA-DOAP06340 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC5.35□□□□□ -1.55
HLA-DOAP06340 AC073544.2-201ENST00000601155 540 ntBASIC5.35□□□□□ -1.55
HLA-DOAP06340 AC096553.1-201ENST00000605169 829 ntBASIC5.35□□□□□ -1.55
HLA-DOAP06340 AC006270.3-201ENST00000605967 1036 ntBASIC5.35□□□□□ -1.55
HLA-DOAP06340 AC020634.1-201ENST00000608701 549 ntBASIC5.35□□□□□ -1.55
HLA-DOAP06340 AC004223.4-201ENST00000612426 332 ntBASIC5.35□□□□□ -1.55
HLA-DOAP06340 AC090246.1-201ENST00000616499 426 ntBASIC5.35□□□□□ -1.55
HLA-DOAP06340 AL356274.1-201ENST00000617064 410 ntBASIC5.35□□□□□ -1.55
HLA-DOAP06340 AL607023.1-201ENST00000620045 248 ntBASIC5.35□□□□□ -1.55
HLA-DOAP06340 AC007342.8-201ENST00000623278 678 ntBASIC5.35□□□□□ -1.55
HLA-DOAP06340 AL359715.5-201ENST00000623431 443 ntBASIC5.35□□□□□ -1.55
HLA-DOAP06340 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC5.35□□□□□ -1.55
HLA-DOAP06340 AC006927.3-201ENST00000638789 384 ntBASIC5.35□□□□□ -1.55
HLA-DOAP06340 AC119674.1-212ENST00000641155 993 ntBASIC5.35□□□□□ -1.55
HLA-DOAP06340 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
HLA-DOAP06340 CPHL1P-201ENST00000461341 3407 ntBASIC5.35□□□□□ -1.55
HLA-DOAP06340 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-DOAP06340 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.35□□□□□ -1.55
HLA-DOAP06340 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-DOAP06340 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.35□□□□□ -1.55
HLA-DOAP06340 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-DOAP06340 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DOAP06340 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DOAP06340 AP000776.1-201ENST00000530032 1663 ntBASIC5.34□□□□□ -1.55
HLA-DOAP06340 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DOAP06340 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.34□□□□□ -1.55
HLA-DOAP06340 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.34□□□□□ -1.55
HLA-DOAP06340 AC005832.2-201ENST00000538921 1430 ntBASIC5.34□□□□□ -1.55
HLA-DOAP06340 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.34□□□□□ -1.55
HLA-DOAP06340 AC025263.3-201ENST00000622965 1396 ntBASIC5.34□□□□□ -1.55
HLA-DOAP06340 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DOAP06340 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.34□□□□□ -1.55
HLA-DOAP06340 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DOAP06340 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DOAP06340 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DOAP06340 RNU4-31P-201ENST00000384211 141 ntBASIC5.34□□□□□ -1.55
HLA-DOAP06340 RNU6-517P-201ENST00000384362 110 ntBASIC5.34□□□□□ -1.55
HLA-DOAP06340 AL034374.1-201ENST00000406329 351 ntBASIC5.34□□□□□ -1.55
HLA-DOAP06340 Y_RNA.604-201ENST00000410574 102 ntBASIC5.34□□□□□ -1.55
HLA-DOAP06340 AC011933.1-201ENST00000413334 321 ntBASIC5.34□□□□□ -1.55
HLA-DOAP06340 AC105402.1-201ENST00000413336 545 ntBASIC5.34□□□□□ -1.55
HLA-DOAP06340 AL049610.1-201ENST00000423374 372 ntBASIC5.34□□□□□ -1.55
HLA-DOAP06340 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.34□□□□□ -1.55
HLA-DOAP06340 AC012519.1-201ENST00000424588 610 ntBASIC5.34□□□□□ -1.55
HLA-DOAP06340 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC5.34□□□□□ -1.55
HLA-DOAP06340 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.34□□□□□ -1.55
HLA-DOAP06340 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.34□□□□□ -1.55
HLA-DOAP06340 MTCYBP34-201ENST00000439552 670 ntBASIC5.34□□□□□ -1.55
HLA-DOAP06340 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.34□□□□□ -1.55
HLA-DOAP06340 RPL23AP43-201ENST00000446445 471 ntBASIC5.34□□□□□ -1.55
HLA-DOAP06340 AL161722.1-201ENST00000446972 1032 ntBASIC5.34□□□□□ -1.55
HLA-DOAP06340 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.34□□□□□ -1.55
HLA-DOAP06340 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC5.34□□□□□ -1.55
HLA-DOAP06340 AC116533.1-201ENST00000459748 321 ntBASIC5.34□□□□□ -1.55
HLA-DOAP06340 CCDC75P1-201ENST00000469247 791 ntBASIC5.34□□□□□ -1.55
HLA-DOAP06340 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.34□□□□□ -1.55
HLA-DOAP06340 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DOAP06340 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC5.34□□□□□ -1.55
HLA-DOAP06340 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.34□□□□□ -1.55
HLA-DOAP06340 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.34□□□□□ -1.55
HLA-DOAP06340 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC5.34□□□□□ -1.55
HLA-DOAP06340 AC083923.1-201ENST00000523708 376 ntBASIC5.34□□□□□ -1.55
HLA-DOAP06340 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.34□□□□□ -1.55
HLA-DOAP06340 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.34□□□□□ -1.55
HLA-DOAP06340 AC027104.1-201ENST00000563702 681 ntBASIC5.34□□□□□ -1.55
HLA-DOAP06340 MIR3939-201ENST00000582614 106 ntBASIC5.34□□□□□ -1.55
HLA-DOAP06340 AF131215.7-201ENST00000602443 707 ntBASIC5.34□□□□□ -1.55
HLA-DOAP06340 AL355073.2-201ENST00000612106 557 ntBASIC5.34□□□□□ -1.55
HLA-DOAP06340 WT1-AS_8.1-201ENST00000615200 275 ntBASIC5.34□□□□□ -1.55
HLA-DOAP06340 AC116165.2-201ENST00000616705 206 ntBASIC5.34□□□□□ -1.55
HLA-DOAP06340 U6.107-201ENST00000637108 79 ntBASIC5.34□□□□□ -1.55
HLA-DOAP06340 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HLA-DOAP06340 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
HLA-DOAP06340 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-DOAP06340 LINC00622-201ENST00000562811 1570 ntBASIC5.33□□□□□ -1.56
HLA-DOAP06340 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-DOAP06340 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-DOAP06340 ZNF833P-201ENST00000424938 1494 ntBASIC5.33□□□□□ -1.56
HLA-DOAP06340 AC005261.2-201ENST00000593427 4258 ntBASIC5.33□□□□□ -1.56
HLA-DOAP06340 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.33□□□□□ -1.56
HLA-DOAP06340 OR5P1P-201ENST00000299512 925 ntBASIC5.33□□□□□ -1.56
HLA-DOAP06340 Y_RNA.3-201ENST00000362331 103 ntBASIC5.33□□□□□ -1.56
HLA-DOAP06340 RNU6-666P-201ENST00000363499 107 ntBASIC5.33□□□□□ -1.56
HLA-DOAP06340 RNU6-549P-201ENST00000384433 107 ntBASIC5.33□□□□□ -1.56
HLA-DOAP06340 MT-TH-201ENST00000387441 69 ntBASIC5.33□□□□□ -1.56
HLA-DOAP06340 SNORA26.8-201ENST00000391306 124 ntBASIC5.33□□□□□ -1.56
HLA-DOAP06340 AC093719.1-202ENST00000392735 373 ntBASIC5.33□□□□□ -1.56
HLA-DOAP06340 TCEA1P4-201ENST00000415066 844 ntBASIC5.33□□□□□ -1.56
HLA-DOAP06340 RAD23BP2-201ENST00000416003 1207 ntBASIC5.33□□□□□ -1.56
HLA-DOAP06340 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.33□□□□□ -1.56
HLA-DOAP06340 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.33□□□□□ -1.56
HLA-DOAP06340 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.33□□□□□ -1.56
HLA-DOAP06340 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms