Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC2.08□□□□□ -2.08
APOBP04114 RPL7P36-201ENST00000444633 681 ntBASIC2.08□□□□□ -2.08
APOBP04114 RPS4XP13-201ENST00000483219 789 ntBASIC2.08□□□□□ -2.08
APOBP04114 ARL4AP1-201ENST00000503220 705 ntBASIC2.08□□□□□ -2.08
APOBP04114 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC2.08□□□□□ -2.08
APOBP04114 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC2.08□□□□□ -2.08
APOBP04114 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.08□□□□□ -2.08
APOBP04114 AC079089.3-201ENST00000603094 673 ntBASIC2.08□□□□□ -2.08
APOBP04114 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
APOBP04114 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC2.08□□□□□ -2.08
APOBP04114 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
APOBP04114 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
APOBP04114 FDX1P2-201ENST00000450769 375 ntBASIC2.08□□□□□ -2.08
APOBP04114 AC098824.1-201ENST00000453565 980 ntBASIC2.08□□□□□ -2.08
APOBP04114 RNA5SP356-201ENST00000515972 94 ntBASIC2.08□□□□□ -2.08
APOBP04114 SUMO2P20-201ENST00000520803 283 ntBASIC2.08□□□□□ -2.08
APOBP04114 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.08□□□□□ -2.08
APOBP04114 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.08□□□□□ -2.08
APOBP04114 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
APOBP04114 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
APOBP04114 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
APOBP04114 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
APOBP04114 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.08□□□□□ -2.08
APOBP04114 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
APOBP04114 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.08□□□□□ -2.08
APOBP04114 AC105272.1-201ENST00000438604 198 ntBASIC2.08□□□□□ -2.08
APOBP04114 AC069540.1-201ENST00000446320 988 ntBASIC2.08□□□□□ -2.08
APOBP04114 PPBPP1-201ENST00000510807 373 ntBASIC2.08□□□□□ -2.08
APOBP04114 PSMA2P1-201ENST00000526365 646 ntBASIC2.08□□□□□ -2.08
APOBP04114 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.08□□□□□ -2.08
APOBP04114 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.08□□□□□ -2.08
APOBP04114 AC008638.3-201ENST00000603341 463 ntBASIC2.08□□□□□ -2.08
APOBP04114 AC087241.4-201ENST00000612441 480 ntBASIC2.08□□□□□ -2.08
APOBP04114 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
APOBP04114 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC2.08□□□□□ -2.08
APOBP04114 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
APOBP04114 AC112198.2-201ENST00000426589 6996 ntBASIC2.08□□□□□ -2.08
APOBP04114 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
APOBP04114 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
APOBP04114 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
APOBP04114 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
APOBP04114 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
APOBP04114 AC138393.1-206ENST00000540997 1886 ntBASIC2.08□□□□□ -2.08
APOBP04114 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC2.07□□□□□ -2.08
APOBP04114 MFSD8-233ENST00000641482 4860 ntBASIC2.07□□□□□ -2.08
APOBP04114 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
APOBP04114 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC2.07□□□□□ -2.08
APOBP04114 AC112198.1-201ENST00000505369 1220 ntBASIC2.07□□□□□ -2.08
APOBP04114 SETP12-201ENST00000514068 805 ntBASIC2.07□□□□□ -2.08
APOBP04114 AC022080.3-201ENST00000544433 482 ntBASIC2.07□□□□□ -2.08
APOBP04114 AP003485.2-201ENST00000623636 610 ntBASIC2.07□□□□□ -2.08
APOBP04114 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC2.07□□□□□ -2.08
APOBP04114 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
APOBP04114 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
APOBP04114 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
APOBP04114 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC2.07□□□□□ -2.08
APOBP04114 AP002512.4-202ENST00000641599 4530 ntBASIC2.07□□□□□ -2.08
APOBP04114 RNA5SP42-201ENST00000364278 115 ntBASIC2.07□□□□□ -2.08
APOBP04114 RNA5SP247-201ENST00000411181 105 ntBASIC2.07□□□□□ -2.08
APOBP04114 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC2.07□□□□□ -2.08
APOBP04114 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC2.07□□□□□ -2.08
APOBP04114 AC084357.1-201ENST00000473404 255 ntBASIC2.07□□□□□ -2.08
APOBP04114 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC2.07□□□□□ -2.08
APOBP04114 RPL23AP92-201ENST00000603609 255 ntBASIC2.07□□□□□ -2.08
APOBP04114 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC2.07□□□□□ -2.08
APOBP04114 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
APOBP04114 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC2.07□□□□□ -2.08
APOBP04114 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
APOBP04114 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.07□□□□□ -2.08
APOBP04114 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
APOBP04114 RPS24P12-201ENST00000402084 394 ntBASIC2.07□□□□□ -2.08
APOBP04114 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.07□□□□□ -2.08
APOBP04114 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.07□□□□□ -2.08
APOBP04114 AL356535.1-201ENST00000440335 398 ntBASIC2.07□□□□□ -2.08
APOBP04114 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.07□□□□□ -2.08
APOBP04114 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
APOBP04114 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
APOBP04114 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
APOBP04114 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
APOBP04114 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
APOBP04114 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
APOBP04114 Z93242.1-201ENST00000427102 353 ntBASIC2.07□□□□□ -2.08
APOBP04114 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC2.07□□□□□ -2.08
APOBP04114 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC2.07□□□□□ -2.08
APOBP04114 RN7SL863P-201ENST00000462370 296 ntBASIC2.07□□□□□ -2.08
APOBP04114 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC2.07□□□□□ -2.08
APOBP04114 HMGB3P13-201ENST00000511263 607 ntBASIC2.07□□□□□ -2.08
APOBP04114 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC2.07□□□□□ -2.08
APOBP04114 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
APOBP04114 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC2.06□□□□□ -2.08
APOBP04114 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
APOBP04114 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
APOBP04114 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC2.06□□□□□ -2.08
APOBP04114 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
APOBP04114 AC005005.4-201ENST00000623789 16698 ntBASIC2.06□□□□□ -2.08
APOBP04114 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC2.06□□□□□ -2.08
APOBP04114 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC2.06□□□□□ -2.08
APOBP04114 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
APOBP04114 RNA5SP293-201ENST00000410527 113 ntBASIC2.06□□□□□ -2.08
APOBP04114 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms