Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.76□□□□□ -1.81
SHOX2O60902 AC068657.1-201ENST00000520807 306 ntBASIC3.76□□□□□ -1.81
SHOX2O60902 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.76□□□□□ -1.81
SHOX2O60902 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.76□□□□□ -1.81
SHOX2O60902 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.76□□□□□ -1.81
SHOX2O60902 AC091516.1-201ENST00000549191 703 ntBASIC3.76□□□□□ -1.81
SHOX2O60902 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.76□□□□□ -1.81
SHOX2O60902 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.76□□□□□ -1.81
SHOX2O60902 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.76□□□□□ -1.81
SHOX2O60902 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.76□□□□□ -1.81
SHOX2O60902 AC027281.1-201ENST00000574178 758 ntBASIC3.76□□□□□ -1.81
SHOX2O60902 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.76□□□□□ -1.81
SHOX2O60902 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.76□□□□□ -1.81
SHOX2O60902 MIR6868-201ENST00000611215 58 ntBASIC3.76□□□□□ -1.81
SHOX2O60902 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.76□□□□□ -1.81
SHOX2O60902 MIR6075-201ENST00000620782 95 ntBASIC3.76□□□□□ -1.81
SHOX2O60902 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SHOX2O60902 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.75□□□□□ -1.81
SHOX2O60902 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
SHOX2O60902 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.75□□□□□ -1.81
SHOX2O60902 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
SHOX2O60902 RNA5SP387-201ENST00000364226 106 ntBASIC3.75□□□□□ -1.81
SHOX2O60902 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.75□□□□□ -1.81
SHOX2O60902 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.75□□□□□ -1.81
SHOX2O60902 RPS27AP7-201ENST00000422792 455 ntBASIC3.75□□□□□ -1.81
SHOX2O60902 COX6B1P7-201ENST00000430845 235 ntBASIC3.75□□□□□ -1.81
SHOX2O60902 AL157884.3-201ENST00000448273 1184 ntBASIC3.75□□□□□ -1.81
SHOX2O60902 BUD31P2-201ENST00000449374 300 ntBASIC3.75□□□□□ -1.81
SHOX2O60902 RPL31P20-201ENST00000449593 360 ntBASIC3.75□□□□□ -1.81
SHOX2O60902 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.75□□□□□ -1.81
SHOX2O60902 SAP18P1-201ENST00000512058 390 ntBASIC3.75□□□□□ -1.81
SHOX2O60902 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.75□□□□□ -1.81
SHOX2O60902 RNA5SP380-201ENST00000517190 98 ntBASIC3.75□□□□□ -1.81
SHOX2O60902 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.75□□□□□ -1.81
SHOX2O60902 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.75□□□□□ -1.81
SHOX2O60902 AC004024.1-201ENST00000549244 247 ntBASIC3.75□□□□□ -1.81
SHOX2O60902 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC3.75□□□□□ -1.81
SHOX2O60902 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.75□□□□□ -1.81
SHOX2O60902 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.75□□□□□ -1.81
SHOX2O60902 AC007224.1-201ENST00000564410 144 ntBASIC3.75□□□□□ -1.81
SHOX2O60902 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.75□□□□□ -1.81
SHOX2O60902 MIR3944-201ENST00000581277 108 ntBASIC3.75□□□□□ -1.81
SHOX2O60902 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.75□□□□□ -1.81
SHOX2O60902 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.75□□□□□ -1.81
SHOX2O60902 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.75□□□□□ -1.81
SHOX2O60902 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.75□□□□□ -1.81
SHOX2O60902 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.75□□□□□ -1.81
SHOX2O60902 AC022149.2-201ENST00000621061 203 ntBASIC3.75□□□□□ -1.81
SHOX2O60902 AL732372.2-225ENST00000642124 456 ntBASIC3.75□□□□□ -1.81
SHOX2O60902 PWAR6-201ENST00000552334 4618 ntBASIC3.75□□□□□ -1.81
SHOX2O60902 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
SHOX2O60902 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SHOX2O60902 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
SHOX2O60902 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.74□□□□□ -1.81
SHOX2O60902 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.74□□□□□ -1.81
SHOX2O60902 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SHOX2O60902 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SHOX2O60902 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
SHOX2O60902 RPL32P23-201ENST00000397237 405 ntBASIC3.74□□□□□ -1.81
SHOX2O60902 AL161909.1-201ENST00000397390 712 ntBASIC3.74□□□□□ -1.81
SHOX2O60902 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SHOX2O60902 AL583834.1-201ENST00000406943 343 ntBASIC3.74□□□□□ -1.81
SHOX2O60902 AC011933.1-201ENST00000413334 321 ntBASIC3.74□□□□□ -1.81
SHOX2O60902 RPL36AP36-201ENST00000418616 301 ntBASIC3.74□□□□□ -1.81
SHOX2O60902 AL732292.1-201ENST00000426692 226 ntBASIC3.74□□□□□ -1.81
SHOX2O60902 TXNP2-201ENST00000443918 295 ntBASIC3.74□□□□□ -1.81
SHOX2O60902 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3.74□□□□□ -1.81
SHOX2O60902 AC006480.1-201ENST00000449887 378 ntBASIC3.74□□□□□ -1.81
SHOX2O60902 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC3.74□□□□□ -1.81
SHOX2O60902 SNORA59A-201ENST00000459326 152 ntBASIC3.74□□□□□ -1.81
SHOX2O60902 AC116533.1-201ENST00000459748 321 ntBASIC3.74□□□□□ -1.81
SHOX2O60902 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.74□□□□□ -1.81
SHOX2O60902 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.74□□□□□ -1.81
SHOX2O60902 AC041039.1-201ENST00000485656 536 ntBASIC3.74□□□□□ -1.81
SHOX2O60902 AC005912.1-201ENST00000495392 255 ntBASIC3.74□□□□□ -1.81
SHOX2O60902 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SHOX2O60902 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC3.74□□□□□ -1.81
SHOX2O60902 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
SHOX2O60902 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SHOX2O60902 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.74□□□□□ -1.81
SHOX2O60902 OR4A12P-201ENST00000530847 918 ntBASIC3.74□□□□□ -1.81
SHOX2O60902 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.74□□□□□ -1.81
SHOX2O60902 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.74□□□□□ -1.81
SHOX2O60902 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
SHOX2O60902 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.74□□□□□ -1.81
SHOX2O60902 MIR4512-201ENST00000583257 77 ntBASIC3.74□□□□□ -1.81
SHOX2O60902 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.74□□□□□ -1.81
SHOX2O60902 AC006254.3-201ENST00000603353 884 ntBASIC3.74□□□□□ -1.81
SHOX2O60902 AC010680.3-201ENST00000604215 520 ntBASIC3.74□□□□□ -1.81
SHOX2O60902 AL049634.3-201ENST00000604968 457 ntBASIC3.74□□□□□ -1.81
SHOX2O60902 MIR6716-201ENST00000613413 80 ntBASIC3.74□□□□□ -1.81
SHOX2O60902 MLECP1-201ENST00000615893 709 ntBASIC3.74□□□□□ -1.81
SHOX2O60902 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SHOX2O60902 OR52H1-202ENST00000641796 1061 ntBASIC3.74□□□□□ -1.81
SHOX2O60902 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
SHOX2O60902 AC068647.1-201ENST00000489539 2265 ntBASIC3.74□□□□□ -1.81
SHOX2O60902 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
SHOX2O60902 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SHOX2O60902 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.73□□□□□ -1.81
SHOX2O60902 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms