Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.04□□□□□ -1.76
LMX1BO60663 AC234781.2-201ENST00000426370 994 ntBASIC4.04□□□□□ -1.76
LMX1BO60663 RPL23AP4-201ENST00000427757 463 ntBASIC4.04□□□□□ -1.76
LMX1BO60663 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.04□□□□□ -1.76
LMX1BO60663 RPL23AP76-201ENST00000441860 458 ntBASIC4.04□□□□□ -1.76
LMX1BO60663 RPL7L1P1-201ENST00000448259 785 ntBASIC4.04□□□□□ -1.76
LMX1BO60663 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.04□□□□□ -1.76
LMX1BO60663 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LMX1BO60663 MRPL42P4-201ENST00000453267 443 ntBASIC4.04□□□□□ -1.76
LMX1BO60663 AC007537.2-201ENST00000472093 511 ntBASIC4.04□□□□□ -1.76
LMX1BO60663 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.04□□□□□ -1.76
LMX1BO60663 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LMX1BO60663 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.04□□□□□ -1.76
LMX1BO60663 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.04□□□□□ -1.76
LMX1BO60663 HSPE1P23-201ENST00000509838 286 ntBASIC4.04□□□□□ -1.76
LMX1BO60663 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.04□□□□□ -1.76
LMX1BO60663 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
LMX1BO60663 MTCO2P32-201ENST00000514865 403 ntBASIC4.04□□□□□ -1.76
LMX1BO60663 RNA5SP446-201ENST00000515955 82 ntBASIC4.04□□□□□ -1.76
LMX1BO60663 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.04□□□□□ -1.76
LMX1BO60663 AC092747.2-201ENST00000545069 983 ntBASIC4.04□□□□□ -1.76
LMX1BO60663 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.04□□□□□ -1.76
LMX1BO60663 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.04□□□□□ -1.76
LMX1BO60663 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.04□□□□□ -1.76
LMX1BO60663 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.04□□□□□ -1.76
LMX1BO60663 MIR4666A-201ENST00000580160 79 ntBASIC4.04□□□□□ -1.76
LMX1BO60663 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.04□□□□□ -1.76
LMX1BO60663 AC022069.1-201ENST00000582910 658 ntBASIC4.04□□□□□ -1.76
LMX1BO60663 MIR4715-201ENST00000584117 79 ntBASIC4.04□□□□□ -1.76
LMX1BO60663 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.04□□□□□ -1.76
LMX1BO60663 MIR4999-201ENST00000585029 91 ntBASIC4.04□□□□□ -1.76
LMX1BO60663 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.04□□□□□ -1.76
LMX1BO60663 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.04□□□□□ -1.76
LMX1BO60663 AC125494.3-201ENST00000602759 455 ntBASIC4.04□□□□□ -1.76
LMX1BO60663 AL031281.1-201ENST00000604049 488 ntBASIC4.04□□□□□ -1.76
LMX1BO60663 AC096553.1-201ENST00000605169 829 ntBASIC4.04□□□□□ -1.76
LMX1BO60663 AC004492.1-201ENST00000607036 742 ntBASIC4.04□□□□□ -1.76
LMX1BO60663 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.04□□□□□ -1.76
LMX1BO60663 AC073530.2-201ENST00000623987 261 ntBASIC4.04□□□□□ -1.76
LMX1BO60663 AP003497.2-201ENST00000624220 967 ntBASIC4.04□□□□□ -1.76
LMX1BO60663 AC010608.2-201ENST00000624830 470 ntBASIC4.04□□□□□ -1.76
LMX1BO60663 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.04□□□□□ -1.76
LMX1BO60663 ZNF663P-202ENST00000641770 1131 ntBASIC4.04□□□□□ -1.76
LMX1BO60663 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
LMX1BO60663 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.04□□□□□ -1.76
LMX1BO60663 AP005901.5-201ENST00000545779 1796 ntBASIC4.04□□□□□ -1.76
LMX1BO60663 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
LMX1BO60663 AC021242.1-201ENST00000507315 2035 ntBASIC4.04□□□□□ -1.76
LMX1BO60663 AL390237.1-201ENST00000404226 1415 ntBASIC4.04□□□□□ -1.76
LMX1BO60663 MTND4P4-201ENST00000439033 1366 ntBASIC4.03□□□□□ -1.76
LMX1BO60663 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
LMX1BO60663 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.03□□□□□ -1.76
LMX1BO60663 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
LMX1BO60663 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
LMX1BO60663 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.03□□□□□ -1.76
LMX1BO60663 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
LMX1BO60663 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
LMX1BO60663 AL590240.1-201ENST00000334118 313 ntBASIC4.03□□□□□ -1.76
LMX1BO60663 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.03□□□□□ -1.76
LMX1BO60663 IGKV7-3-201ENST00000357453 298 ntBASIC4.03□□□□□ -1.76
LMX1BO60663 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
LMX1BO60663 RNU1-20P-201ENST00000363314 162 ntBASIC4.03□□□□□ -1.76
LMX1BO60663 RNU6-560P-201ENST00000364007 108 ntBASIC4.03□□□□□ -1.76
LMX1BO60663 RNU4-75P-201ENST00000364621 146 ntBASIC4.03□□□□□ -1.76
LMX1BO60663 RNU6-304P-201ENST00000364855 107 ntBASIC4.03□□□□□ -1.76
LMX1BO60663 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.03□□□□□ -1.76
LMX1BO60663 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
LMX1BO60663 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LMX1BO60663 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.03□□□□□ -1.76
LMX1BO60663 RSU1P3-201ENST00000412878 835 ntBASIC4.03□□□□□ -1.76
LMX1BO60663 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.03□□□□□ -1.76
LMX1BO60663 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.03□□□□□ -1.76
LMX1BO60663 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.03□□□□□ -1.76
LMX1BO60663 AC098592.1-201ENST00000419352 333 ntBASIC4.03□□□□□ -1.76
LMX1BO60663 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.03□□□□□ -1.76
LMX1BO60663 AC006960.1-201ENST00000419980 153 ntBASIC4.03□□□□□ -1.76
LMX1BO60663 OR6K4P-201ENST00000423179 955 ntBASIC4.03□□□□□ -1.76
LMX1BO60663 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.03□□□□□ -1.76
LMX1BO60663 RSL24D1P6-201ENST00000426934 401 ntBASIC4.03□□□□□ -1.76
LMX1BO60663 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.03□□□□□ -1.76
LMX1BO60663 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.03□□□□□ -1.76
LMX1BO60663 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.03□□□□□ -1.76
LMX1BO60663 PPIAP13-201ENST00000434706 478 ntBASIC4.03□□□□□ -1.76
LMX1BO60663 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.03□□□□□ -1.76
LMX1BO60663 AC016831.4-201ENST00000438302 307 ntBASIC4.03□□□□□ -1.76
LMX1BO60663 AL360221.1-201ENST00000445989 335 ntBASIC4.03□□□□□ -1.76
LMX1BO60663 AL929288.2-201ENST00000446368 407 ntBASIC4.03□□□□□ -1.76
LMX1BO60663 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.03□□□□□ -1.76
LMX1BO60663 ELOCP30-201ENST00000447108 299 ntBASIC4.03□□□□□ -1.76
LMX1BO60663 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.03□□□□□ -1.76
LMX1BO60663 AL109741.2-201ENST00000455561 343 ntBASIC4.03□□□□□ -1.76
LMX1BO60663 RPS5P7-201ENST00000456664 608 ntBASIC4.03□□□□□ -1.76
LMX1BO60663 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.03□□□□□ -1.76
LMX1BO60663 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.03□□□□□ -1.76
LMX1BO60663 AL161747.1-201ENST00000480068 358 ntBASIC4.03□□□□□ -1.76
LMX1BO60663 RPL7AP10-201ENST00000481016 791 ntBASIC4.03□□□□□ -1.76
LMX1BO60663 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.03□□□□□ -1.76
LMX1BO60663 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.03□□□□□ -1.76
LMX1BO60663 AC112198.1-201ENST00000505369 1220 ntBASIC4.03□□□□□ -1.76
LMX1BO60663 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms