Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
GRIN3BO60391 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
GRIN3BO60391 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
GRIN3BO60391 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
GRIN3BO60391 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
GRIN3BO60391 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC6.3□□□□□ -1.4
GRIN3BO60391 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
GRIN3BO60391 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
GRIN3BO60391 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.3□□□□□ -1.4
GRIN3BO60391 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
GRIN3BO60391 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
GRIN3BO60391 RNU6-492P-201ENST00000363035 104 ntBASIC6.3□□□□□ -1.4
GRIN3BO60391 RNU5F-7P-201ENST00000363696 115 ntBASIC6.3□□□□□ -1.4
GRIN3BO60391 RNU5A-6P-201ENST00000384136 116 ntBASIC6.3□□□□□ -1.4
GRIN3BO60391 RPL11P3-201ENST00000395256 523 ntBASIC6.3□□□□□ -1.4
GRIN3BO60391 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.3□□□□□ -1.4
GRIN3BO60391 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC6.3□□□□□ -1.4
GRIN3BO60391 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
GRIN3BO60391 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC6.3□□□□□ -1.4
GRIN3BO60391 NRBF2P3-201ENST00000432731 865 ntBASIC6.3□□□□□ -1.4
GRIN3BO60391 AC005154.2-201ENST00000438110 379 ntBASIC6.3□□□□□ -1.4
GRIN3BO60391 RPL7P59-201ENST00000447700 943 ntBASIC6.3□□□□□ -1.4
GRIN3BO60391 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC6.3□□□□□ -1.4
GRIN3BO60391 NANOGNBP1-201ENST00000448444 480 ntBASIC6.3□□□□□ -1.4
GRIN3BO60391 PAXBP1P1-201ENST00000449315 447 ntBASIC6.3□□□□□ -1.4
GRIN3BO60391 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC6.3□□□□□ -1.4
GRIN3BO60391 SNORD42A-201ENST00000459584 64 ntBASIC6.3□□□□□ -1.4
GRIN3BO60391 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC6.3□□□□□ -1.4
GRIN3BO60391 AHI1-208ENST00000488690 712 ntTSL 5 BASIC6.3□□□□□ -1.4
GRIN3BO60391 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC6.3□□□□□ -1.4
GRIN3BO60391 AC091167.1-201ENST00000492017 396 ntBASIC6.3□□□□□ -1.4
GRIN3BO60391 RPL7P24-201ENST00000493052 752 ntBASIC6.3□□□□□ -1.4
GRIN3BO60391 AC023424.2-201ENST00000493479 777 ntBASIC6.3□□□□□ -1.4
GRIN3BO60391 MRPS33P2-201ENST00000507850 322 ntBASIC6.3□□□□□ -1.4
GRIN3BO60391 MIR2116-201ENST00000517221 80 ntBASIC6.3□□□□□ -1.4
GRIN3BO60391 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC6.3□□□□□ -1.4
GRIN3BO60391 AP002453.2-201ENST00000533503 320 ntBASIC6.3□□□□□ -1.4
GRIN3BO60391 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC6.3□□□□□ -1.4
GRIN3BO60391 AC004217.3-201ENST00000551552 878 ntBASIC6.3□□□□□ -1.4
GRIN3BO60391 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC6.3□□□□□ -1.4
GRIN3BO60391 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC6.3□□□□□ -1.4
GRIN3BO60391 AC053481.3-201ENST00000577881 843 ntBASIC6.3□□□□□ -1.4
GRIN3BO60391 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.3□□□□□ -1.4
GRIN3BO60391 SEPT7P9-203ENST00000604116 343 ntBASIC6.3□□□□□ -1.4
GRIN3BO60391 AC069304.2-201ENST00000605154 435 ntBASIC6.3□□□□□ -1.4
GRIN3BO60391 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC6.3□□□□□ -1.4
GRIN3BO60391 AL159169.3-201ENST00000608871 561 ntBASIC6.3□□□□□ -1.4
GRIN3BO60391 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC6.3□□□□□ -1.4
GRIN3BO60391 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.3□□□□□ -1.4
GRIN3BO60391 AC023043.4-201ENST00000612081 449 ntBASIC6.3□□□□□ -1.4
GRIN3BO60391 AC243756.2-201ENST00000618406 463 ntBASIC6.3□□□□□ -1.4
GRIN3BO60391 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
GRIN3BO60391 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
GRIN3BO60391 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
GRIN3BO60391 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC6.3□□□□□ -1.4
GRIN3BO60391 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
GRIN3BO60391 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.3□□□□□ -1.4
GRIN3BO60391 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
GRIN3BO60391 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
GRIN3BO60391 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
GRIN3BO60391 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
GRIN3BO60391 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
GRIN3BO60391 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
GRIN3BO60391 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
GRIN3BO60391 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
GRIN3BO60391 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.29□□□□□ -1.4
GRIN3BO60391 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.29□□□□□ -1.4
GRIN3BO60391 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
GRIN3BO60391 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
GRIN3BO60391 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
GRIN3BO60391 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
GRIN3BO60391 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC6.29□□□□□ -1.4
GRIN3BO60391 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
GRIN3BO60391 CDC27P2-201ENST00000425026 1922 ntBASIC6.29□□□□□ -1.4
GRIN3BO60391 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
GRIN3BO60391 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC6.29□□□□□ -1.4
GRIN3BO60391 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
GRIN3BO60391 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
GRIN3BO60391 BOLA3P4-201ENST00000418151 400 ntBASIC6.29□□□□□ -1.4
GRIN3BO60391 Z97055.1-201ENST00000419730 712 ntBASIC6.29□□□□□ -1.4
GRIN3BO60391 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC6.29□□□□□ -1.4
GRIN3BO60391 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC6.29□□□□□ -1.4
GRIN3BO60391 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC6.29□□□□□ -1.4
GRIN3BO60391 YWHAQP9-201ENST00000445891 512 ntBASIC6.29□□□□□ -1.4
GRIN3BO60391 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC6.29□□□□□ -1.4
GRIN3BO60391 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC6.29□□□□□ -1.4
GRIN3BO60391 AC098824.1-201ENST00000453565 980 ntBASIC6.29□□□□□ -1.4
GRIN3BO60391 RPL18AP17-201ENST00000455326 198 ntBASIC6.29□□□□□ -1.4
GRIN3BO60391 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC6.29□□□□□ -1.4
GRIN3BO60391 AP000797.1-201ENST00000478870 387 ntBASIC6.29□□□□□ -1.4
GRIN3BO60391 NIP7P2-201ENST00000485801 544 ntBASIC6.29□□□□□ -1.4
GRIN3BO60391 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC6.29□□□□□ -1.4
GRIN3BO60391 HMGB1P28-201ENST00000507778 552 ntBASIC6.29□□□□□ -1.4
GRIN3BO60391 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.29□□□□□ -1.4
GRIN3BO60391 AC090751.1-201ENST00000566966 267 ntBASIC6.29□□□□□ -1.4
GRIN3BO60391 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC6.29□□□□□ -1.4
GRIN3BO60391 AP005119.2-201ENST00000579735 1105 ntBASIC6.29□□□□□ -1.4
GRIN3BO60391 MIR548AB-201ENST00000584917 84 ntBASIC6.29□□□□□ -1.4
GRIN3BO60391 LSM1P2-201ENST00000604911 322 ntBASIC6.29□□□□□ -1.4
GRIN3BO60391 AL133481.2-203ENST00000607558 139 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms