Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SSX4O60224 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.16□□□□□ -1.74
SSX4O60224 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SSX4O60224 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.16□□□□□ -1.74
SSX4O60224 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SSX4O60224 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.16□□□□□ -1.74
SSX4O60224 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.16□□□□□ -1.74
SSX4O60224 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.16□□□□□ -1.74
SSX4O60224 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
SSX4O60224 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SSX4O60224 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SSX4O60224 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.15□□□□□ -1.74
SSX4O60224 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
SSX4O60224 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SSX4O60224 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.15□□□□□ -1.74
SSX4O60224 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
SSX4O60224 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SSX4O60224 RPL32P3-201ENST00000359025 275 ntBASIC4.15□□□□□ -1.75
SSX4O60224 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.15□□□□□ -1.75
SSX4O60224 RNU6-582P-201ENST00000362989 107 ntBASIC4.15□□□□□ -1.75
SSX4O60224 RNU6-636P-201ENST00000384598 107 ntBASIC4.15□□□□□ -1.75
SSX4O60224 SNORD116-23-201ENST00000384645 92 ntBASIC4.15□□□□□ -1.75
SSX4O60224 MIR708-201ENST00000390708 88 ntBASIC4.15□□□□□ -1.75
SSX4O60224 SNORD65.1-201ENST00000390889 71 ntBASIC4.15□□□□□ -1.75
SSX4O60224 RNA5SP332-201ENST00000391063 115 ntBASIC4.15□□□□□ -1.75
SSX4O60224 MIR921-201ENST00000401133 56 ntBASIC4.15□□□□□ -1.75
SSX4O60224 RN7SKP106-201ENST00000410832 272 ntBASIC4.15□□□□□ -1.75
SSX4O60224 AL450992.3-201ENST00000413192 568 ntBASIC4.15□□□□□ -1.75
SSX4O60224 AC004552.1-201ENST00000419089 348 ntBASIC4.15□□□□□ -1.75
SSX4O60224 AC009237.2-201ENST00000421358 284 ntBASIC4.15□□□□□ -1.75
SSX4O60224 RPS12P5-201ENST00000423449 371 ntBASIC4.15□□□□□ -1.75
SSX4O60224 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC4.15□□□□□ -1.75
SSX4O60224 DPRXP1-201ENST00000426312 460 ntBASIC4.15□□□□□ -1.75
SSX4O60224 OR2B7P-201ENST00000429302 934 ntBASIC4.15□□□□□ -1.75
SSX4O60224 MTCO1P54-201ENST00000430139 712 ntBASIC4.15□□□□□ -1.75
SSX4O60224 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SSX4O60224 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.15□□□□□ -1.75
SSX4O60224 IFNWP4-201ENST00000453148 294 ntBASIC4.15□□□□□ -1.75
SSX4O60224 RPL23AP56-201ENST00000460778 453 ntBASIC4.15□□□□□ -1.75
SSX4O60224 AC010326.1-201ENST00000462726 602 ntBASIC4.15□□□□□ -1.75
SSX4O60224 RPS26P3-201ENST00000470205 348 ntBASIC4.15□□□□□ -1.75
SSX4O60224 VPS26AP1-201ENST00000483197 979 ntBASIC4.15□□□□□ -1.75
SSX4O60224 AC090543.2-201ENST00000483963 348 ntBASIC4.15□□□□□ -1.75
SSX4O60224 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.15□□□□□ -1.75
SSX4O60224 AC004057.1-201ENST00000485827 348 ntBASIC4.15□□□□□ -1.75
SSX4O60224 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.15□□□□□ -1.75
SSX4O60224 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.15□□□□□ -1.75
SSX4O60224 PRELID3BP5-201ENST00000508612 460 ntBASIC4.15□□□□□ -1.75
SSX4O60224 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.15□□□□□ -1.75
SSX4O60224 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.15□□□□□ -1.75
SSX4O60224 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.15□□□□□ -1.75
SSX4O60224 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.15□□□□□ -1.75
SSX4O60224 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.15□□□□□ -1.75
SSX4O60224 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC4.15□□□□□ -1.75
SSX4O60224 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.15□□□□□ -1.75
SSX4O60224 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SSX4O60224 AC021749.1-201ENST00000604322 607 ntBASIC4.15□□□□□ -1.75
SSX4O60224 MIR6864-201ENST00000617935 70 ntBASIC4.15□□□□□ -1.75
SSX4O60224 MIR6853-201ENST00000619642 74 ntBASIC4.15□□□□□ -1.75
SSX4O60224 MIR6758-201ENST00000620653 63 ntBASIC4.15□□□□□ -1.75
SSX4O60224 AC067852.7-201ENST00000623270 535 ntBASIC4.15□□□□□ -1.75
SSX4O60224 AP006248.2-201ENST00000623309 592 ntBASIC4.15□□□□□ -1.75
SSX4O60224 AC090897.3-201ENST00000636973 1157 ntBASIC4.15□□□□□ -1.75
SSX4O60224 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.15□□□□□ -1.75
SSX4O60224 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SSX4O60224 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.15□□□□□ -1.75
SSX4O60224 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.15□□□□□ -1.75
SSX4O60224 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
SSX4O60224 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SSX4O60224 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SSX4O60224 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
SSX4O60224 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.15□□□□□ -1.75
SSX4O60224 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.15□□□□□ -1.75
SSX4O60224 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
SSX4O60224 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.14□□□□□ -1.75
SSX4O60224 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.14□□□□□ -1.75
SSX4O60224 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SSX4O60224 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.14□□□□□ -1.75
SSX4O60224 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.14□□□□□ -1.75
SSX4O60224 SNORD74.4-201ENST00000364129 80 ntBASIC4.14□□□□□ -1.75
SSX4O60224 RNA5SP513-201ENST00000364648 118 ntBASIC4.14□□□□□ -1.75
SSX4O60224 DSTNP4-201ENST00000399472 474 ntBASIC4.14□□□□□ -1.75
SSX4O60224 LAP3P1-201ENST00000403648 294 ntBASIC4.14□□□□□ -1.75
SSX4O60224 AL078604.1-201ENST00000404609 466 ntBASIC4.14□□□□□ -1.75
SSX4O60224 P2RY10P2-201ENST00000416730 913 ntBASIC4.14□□□□□ -1.75
SSX4O60224 AC008280.1-201ENST00000418851 412 ntBASIC4.14□□□□□ -1.75
SSX4O60224 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.14□□□□□ -1.75
SSX4O60224 RPL7P57-201ENST00000423238 740 ntBASIC4.14□□□□□ -1.75
SSX4O60224 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.14□□□□□ -1.75
SSX4O60224 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.14□□□□□ -1.75
SSX4O60224 RPL21P43-201ENST00000425440 472 ntBASIC4.14□□□□□ -1.75
SSX4O60224 CENPIP1-201ENST00000425713 902 ntBASIC4.14□□□□□ -1.75
SSX4O60224 RPP40P1-201ENST00000426762 456 ntBASIC4.14□□□□□ -1.75
SSX4O60224 SEPT7P5-201ENST00000434048 306 ntBASIC4.14□□□□□ -1.75
SSX4O60224 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.14□□□□□ -1.75
SSX4O60224 AC093155.1-201ENST00000440164 826 ntBASIC4.14□□□□□ -1.75
SSX4O60224 AL353748.1-201ENST00000440753 474 ntBASIC4.14□□□□□ -1.75
SSX4O60224 CR769776.1-201ENST00000441254 787 ntBASIC4.14□□□□□ -1.75
SSX4O60224 NDUFS5P3-201ENST00000450668 321 ntBASIC4.14□□□□□ -1.75
SSX4O60224 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms