Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
PHGDHO43175 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PHGDHO43175 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PHGDHO43175 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.92□□□□□ -1.62
PHGDHO43175 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
PHGDHO43175 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PHGDHO43175 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.92□□□□□ -1.62
PHGDHO43175 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
PHGDHO43175 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PHGDHO43175 AP000542.2-201ENST00000623199 6179 ntBASIC4.92□□□□□ -1.62
PHGDHO43175 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
PHGDHO43175 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PHGDHO43175 AC073429.2-201ENST00000569694 1444 ntBASIC4.92□□□□□ -1.62
PHGDHO43175 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.92□□□□□ -1.62
PHGDHO43175 Y_RNA.51-201ENST00000362725 102 ntBASIC4.92□□□□□ -1.62
PHGDHO43175 RN7SKP149-201ENST00000363008 344 ntBASIC4.92□□□□□ -1.62
PHGDHO43175 Y_RNA.201-201ENST00000364052 96 ntBASIC4.92□□□□□ -1.62
PHGDHO43175 RNA5SP88-201ENST00000365560 109 ntBASIC4.92□□□□□ -1.62
PHGDHO43175 Y_RNA.436-201ENST00000384097 102 ntBASIC4.92□□□□□ -1.62
PHGDHO43175 MIR323B-201ENST00000385269 82 ntBASIC4.92□□□□□ -1.62
PHGDHO43175 SNORA26.8-201ENST00000391306 124 ntBASIC4.92□□□□□ -1.62
PHGDHO43175 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
PHGDHO43175 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.92□□□□□ -1.62
PHGDHO43175 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.92□□□□□ -1.62
PHGDHO43175 RPL36AP10-201ENST00000421785 322 ntBASIC4.92□□□□□ -1.62
PHGDHO43175 COX6CP15-201ENST00000426313 211 ntBASIC4.92□□□□□ -1.62
PHGDHO43175 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.92□□□□□ -1.62
PHGDHO43175 MTCO2P16-201ENST00000436962 677 ntBASIC4.92□□□□□ -1.62
PHGDHO43175 RPL34P20-201ENST00000442771 351 ntBASIC4.92□□□□□ -1.62
PHGDHO43175 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.92□□□□□ -1.62
PHGDHO43175 AL354714.3-201ENST00000447284 493 ntBASIC4.92□□□□□ -1.62
PHGDHO43175 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.92□□□□□ -1.62
PHGDHO43175 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PHGDHO43175 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.92□□□□□ -1.62
PHGDHO43175 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.92□□□□□ -1.62
PHGDHO43175 OR2AO1P-201ENST00000476497 403 ntBASIC4.92□□□□□ -1.62
PHGDHO43175 RPS21P4-201ENST00000487122 248 ntBASIC4.92□□□□□ -1.62
PHGDHO43175 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.92□□□□□ -1.62
PHGDHO43175 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.92□□□□□ -1.62
PHGDHO43175 AC090071.1-201ENST00000507713 644 ntBASIC4.92□□□□□ -1.62
PHGDHO43175 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PHGDHO43175 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.92□□□□□ -1.62
PHGDHO43175 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.92□□□□□ -1.62
PHGDHO43175 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
PHGDHO43175 NDUFA5P2-201ENST00000519723 344 ntBASIC4.92□□□□□ -1.62
PHGDHO43175 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.92□□□□□ -1.62
PHGDHO43175 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.92□□□□□ -1.62
PHGDHO43175 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.92□□□□□ -1.62
PHGDHO43175 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.92□□□□□ -1.62
PHGDHO43175 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.92□□□□□ -1.62
PHGDHO43175 AC007225.2-201ENST00000562529 256 ntBASIC4.92□□□□□ -1.62
PHGDHO43175 AC124068.1-201ENST00000563131 678 ntBASIC4.92□□□□□ -1.62
PHGDHO43175 ROCK1P1-201ENST00000573767 549 ntBASIC4.92□□□□□ -1.62
PHGDHO43175 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.92□□□□□ -1.62
PHGDHO43175 MTCYBP22-201ENST00000603788 447 ntBASIC4.92□□□□□ -1.62
PHGDHO43175 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.92□□□□□ -1.62
PHGDHO43175 AC090948.2-201ENST00000607363 564 ntBASIC4.92□□□□□ -1.62
PHGDHO43175 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.92□□□□□ -1.62
PHGDHO43175 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
PHGDHO43175 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.92□□□□□ -1.62
PHGDHO43175 AC099494.2-201ENST00000623371 978 ntBASIC4.92□□□□□ -1.62
PHGDHO43175 AC092192.1-201ENST00000633154 1018 ntBASIC4.92□□□□□ -1.62
PHGDHO43175 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.92□□□□□ -1.62
PHGDHO43175 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PHGDHO43175 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.92□□□□□ -1.62
PHGDHO43175 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
PHGDHO43175 SALL4P2-201ENST00000423288 2910 ntBASIC4.92□□□□□ -1.62
PHGDHO43175 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
PHGDHO43175 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
PHGDHO43175 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PHGDHO43175 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PHGDHO43175 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PHGDHO43175 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PHGDHO43175 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
PHGDHO43175 RNU6-660P-201ENST00000364566 109 ntBASIC4.91□□□□□ -1.62
PHGDHO43175 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
PHGDHO43175 SNORA68.2-201ENST00000391263 128 ntBASIC4.91□□□□□ -1.62
PHGDHO43175 AC005522.1-201ENST00000395416 346 ntBASIC4.91□□□□□ -1.62
PHGDHO43175 VDAC2P1-201ENST00000399358 958 ntBASIC4.91□□□□□ -1.62
PHGDHO43175 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.91□□□□□ -1.62
PHGDHO43175 RNU2-21P-201ENST00000410368 188 ntBASIC4.91□□□□□ -1.62
PHGDHO43175 TPMTP3-201ENST00000411928 735 ntBASIC4.91□□□□□ -1.62
PHGDHO43175 RPL7P8-201ENST00000411964 730 ntBASIC4.91□□□□□ -1.62
PHGDHO43175 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.91□□□□□ -1.62
PHGDHO43175 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.91□□□□□ -1.62
PHGDHO43175 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.91□□□□□ -1.62
PHGDHO43175 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.91□□□□□ -1.62
PHGDHO43175 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.91□□□□□ -1.62
PHGDHO43175 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.91□□□□□ -1.62
PHGDHO43175 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.91□□□□□ -1.62
PHGDHO43175 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.91□□□□□ -1.62
PHGDHO43175 MTCO2P7-201ENST00000446518 666 ntBASIC4.91□□□□□ -1.62
PHGDHO43175 AL031584.1-201ENST00000447169 754 ntBASIC4.91□□□□□ -1.62
PHGDHO43175 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PHGDHO43175 ZNF114P1-201ENST00000453500 292 ntBASIC4.91□□□□□ -1.62
PHGDHO43175 TRBV26-201ENST00000456572 344 ntBASIC4.91□□□□□ -1.62
PHGDHO43175 AC097493.1-201ENST00000463958 372 ntBASIC4.91□□□□□ -1.62
PHGDHO43175 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
PHGDHO43175 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.91□□□□□ -1.62
PHGDHO43175 AC091435.1-201ENST00000505442 584 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms