Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AL391834.1-201ENST00000609609 560 ntBASIC3.47□□□□□ -1.85
UPK1AO00322 AC090912.3-201ENST00000609775 533 ntBASIC3.47□□□□□ -1.85
UPK1AO00322 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.47□□□□□ -1.85
UPK1AO00322 AC020978.9-201ENST00000624380 1141 ntBASIC3.47□□□□□ -1.85
UPK1AO00322 AC019080.5-201ENST00000624891 757 ntBASIC3.47□□□□□ -1.85
UPK1AO00322 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
UPK1AO00322 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
UPK1AO00322 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
UPK1AO00322 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
UPK1AO00322 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.47□□□□□ -1.85
UPK1AO00322 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.47□□□□□ -1.85
UPK1AO00322 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
UPK1AO00322 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.46□□□□□ -1.85
UPK1AO00322 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
UPK1AO00322 RIOK3P1-201ENST00000418778 1528 ntBASIC3.46□□□□□ -1.86
UPK1AO00322 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
UPK1AO00322 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
UPK1AO00322 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.46□□□□□ -1.86
UPK1AO00322 AP002088.1-201ENST00000382740 395 ntBASIC3.46□□□□□ -1.86
UPK1AO00322 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
UPK1AO00322 MTND2P15-201ENST00000418575 892 ntBASIC3.46□□□□□ -1.86
UPK1AO00322 AL159169.1-201ENST00000421119 127 ntBASIC3.46□□□□□ -1.86
UPK1AO00322 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
UPK1AO00322 AL133162.1-201ENST00000463228 453 ntBASIC3.46□□□□□ -1.86
UPK1AO00322 AC010627.1-201ENST00000503819 1294 ntBASIC3.46□□□□□ -1.86
UPK1AO00322 AC110768.1-201ENST00000509222 400 ntBASIC3.46□□□□□ -1.86
UPK1AO00322 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
UPK1AO00322 AC034244.2-201ENST00000514668 858 ntBASIC3.46□□□□□ -1.86
UPK1AO00322 AC008676.3-201ENST00000521237 435 ntBASIC3.46□□□□□ -1.86
UPK1AO00322 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.46□□□□□ -1.86
UPK1AO00322 AC008011.1-201ENST00000545989 227 ntBASIC3.46□□□□□ -1.86
UPK1AO00322 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
UPK1AO00322 AC011602.1-201ENST00000546484 331 ntBASIC3.46□□□□□ -1.86
UPK1AO00322 AL121766.1-201ENST00000547436 487 ntBASIC3.46□□□□□ -1.86
UPK1AO00322 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.46□□□□□ -1.86
UPK1AO00322 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.46□□□□□ -1.86
UPK1AO00322 AC022884.3-201ENST00000579571 248 ntBASIC3.46□□□□□ -1.86
UPK1AO00322 MIR5187-201ENST00000583479 76 ntBASIC3.46□□□□□ -1.86
UPK1AO00322 AC005021.1-201ENST00000608730 355 ntBASIC3.46□□□□□ -1.86
UPK1AO00322 AC099676.1-201ENST00000608886 657 ntBASIC3.46□□□□□ -1.86
UPK1AO00322 RPL23AP61-201ENST00000623642 466 ntBASIC3.46□□□□□ -1.86
UPK1AO00322 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
UPK1AO00322 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.45□□□□□ -1.86
UPK1AO00322 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
UPK1AO00322 OR4A15-201ENST00000314706 1035 ntBASIC3.45□□□□□ -1.86
UPK1AO00322 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
UPK1AO00322 RNU6-666P-201ENST00000363499 107 ntBASIC3.45□□□□□ -1.86
UPK1AO00322 RN7SKP280-201ENST00000364196 304 ntBASIC3.45□□□□□ -1.86
UPK1AO00322 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.45□□□□□ -1.86
UPK1AO00322 RPL32P23-201ENST00000397237 405 ntBASIC3.45□□□□□ -1.86
UPK1AO00322 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.45□□□□□ -1.86
UPK1AO00322 RN7SKP156-201ENST00000410308 342 ntBASIC3.45□□□□□ -1.86
UPK1AO00322 AC009237.5-201ENST00000414271 501 ntBASIC3.45□□□□□ -1.86
UPK1AO00322 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.45□□□□□ -1.86
UPK1AO00322 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.45□□□□□ -1.86
UPK1AO00322 HMGB3P20-201ENST00000417997 600 ntBASIC3.45□□□□□ -1.86
UPK1AO00322 RPL7P2-201ENST00000427639 268 ntBASIC3.45□□□□□ -1.86
UPK1AO00322 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.45□□□□□ -1.86
UPK1AO00322 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.45□□□□□ -1.86
UPK1AO00322 AL645931.1-201ENST00000439737 410 ntBASIC3.45□□□□□ -1.86
UPK1AO00322 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC3.45□□□□□ -1.86
UPK1AO00322 SNRPGP5-201ENST00000456003 220 ntBASIC3.45□□□□□ -1.86
UPK1AO00322 AC099563.1-201ENST00000456086 418 ntBASIC3.45□□□□□ -1.86
UPK1AO00322 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.45□□□□□ -1.86
UPK1AO00322 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.45□□□□□ -1.86
UPK1AO00322 NPM1P41-201ENST00000512920 831 ntBASIC3.45□□□□□ -1.86
UPK1AO00322 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.45□□□□□ -1.86
UPK1AO00322 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.45□□□□□ -1.86
UPK1AO00322 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
UPK1AO00322 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.45□□□□□ -1.86
UPK1AO00322 EIF1AXP2-201ENST00000555940 413 ntBASIC3.45□□□□□ -1.86
UPK1AO00322 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC3.45□□□□□ -1.86
UPK1AO00322 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.45□□□□□ -1.86
UPK1AO00322 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
UPK1AO00322 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.45□□□□□ -1.86
UPK1AO00322 VN1R85P-201ENST00000601587 426 ntBASIC3.45□□□□□ -1.86
UPK1AO00322 uc_338.9-201ENST00000617424 182 ntBASIC3.45□□□□□ -1.86
UPK1AO00322 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
UPK1AO00322 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
UPK1AO00322 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.45□□□□□ -1.86
UPK1AO00322 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
UPK1AO00322 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.44□□□□□ -1.86
UPK1AO00322 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.44□□□□□ -1.86
UPK1AO00322 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
UPK1AO00322 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
UPK1AO00322 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.44□□□□□ -1.86
UPK1AO00322 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
UPK1AO00322 RNU4-23P-201ENST00000362839 140 ntBASIC3.44□□□□□ -1.86
UPK1AO00322 RPL7P60-201ENST00000397636 735 ntBASIC3.44□□□□□ -1.86
UPK1AO00322 RN7SKP177-201ENST00000410567 355 ntBASIC3.44□□□□□ -1.86
UPK1AO00322 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.44□□□□□ -1.86
UPK1AO00322 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
UPK1AO00322 AC006989.1-201ENST00000427212 131 ntBASIC3.44□□□□□ -1.86
UPK1AO00322 Z85994.2-201ENST00000434327 452 ntBASIC3.44□□□□□ -1.86
UPK1AO00322 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.44□□□□□ -1.86
UPK1AO00322 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.44□□□□□ -1.86
UPK1AO00322 AC010401.1-201ENST00000463867 348 ntBASIC3.44□□□□□ -1.86
UPK1AO00322 AC068587.1-201ENST00000483613 781 ntBASIC3.44□□□□□ -1.86
UPK1AO00322 HMGB3P14-201ENST00000494195 599 ntBASIC3.44□□□□□ -1.86
UPK1AO00322 AC005912.1-201ENST00000495392 255 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms