Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS11Q9H270 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS11Q9H270 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VPS11Q9H270 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.33□□□□□ -1.56
VPS11Q9H270 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VPS11Q9H270 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
VPS11Q9H270 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
VPS11Q9H270 CASC19-206ENST00000641028 1430 ntBASIC5.33□□□□□ -1.56
VPS11Q9H270 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.33□□□□□ -1.56
VPS11Q9H270 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
VPS11Q9H270 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
VPS11Q9H270 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS11Q9H270 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS11Q9H270 IL6STP1-201ENST00000346911 1020 ntBASIC5.33□□□□□ -1.56
VPS11Q9H270 RN7SKP275-201ENST00000364626 301 ntBASIC5.33□□□□□ -1.56
VPS11Q9H270 RNU4-2-201ENST00000365668 141 ntBASIC5.33□□□□□ -1.56
VPS11Q9H270 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.33□□□□□ -1.56
VPS11Q9H270 RPL31P52-201ENST00000407532 367 ntBASIC5.33□□□□□ -1.56
VPS11Q9H270 RNU6-272P-201ENST00000411028 104 ntBASIC5.33□□□□□ -1.56
VPS11Q9H270 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VPS11Q9H270 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VPS11Q9H270 AL022400.1-201ENST00000423946 935 ntBASIC5.33□□□□□ -1.56
VPS11Q9H270 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.33□□□□□ -1.56
VPS11Q9H270 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC5.33□□□□□ -1.56
VPS11Q9H270 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC5.33□□□□□ -1.56
VPS11Q9H270 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VPS11Q9H270 AL138899.2-201ENST00000439139 499 ntBASIC5.33□□□□□ -1.56
VPS11Q9H270 PCNPP2-201ENST00000441651 455 ntBASIC5.33□□□□□ -1.56
VPS11Q9H270 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VPS11Q9H270 EEF1B2P6-201ENST00000445713 673 ntBASIC5.33□□□□□ -1.56
VPS11Q9H270 AC007677.1-201ENST00000445757 515 ntBASIC5.33□□□□□ -1.56
VPS11Q9H270 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.33□□□□□ -1.56
VPS11Q9H270 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC5.33□□□□□ -1.56
VPS11Q9H270 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.33□□□□□ -1.56
VPS11Q9H270 AL035090.1-201ENST00000454835 332 ntBASIC5.33□□□□□ -1.56
VPS11Q9H270 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC5.33□□□□□ -1.56
VPS11Q9H270 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.33□□□□□ -1.56
VPS11Q9H270 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
VPS11Q9H270 AC092989.1-201ENST00000481235 277 ntBASIC5.33□□□□□ -1.56
VPS11Q9H270 RN7SL814P-201ENST00000487715 300 ntBASIC5.33□□□□□ -1.56
VPS11Q9H270 AC104971.1-201ENST00000495117 578 ntBASIC5.33□□□□□ -1.56
VPS11Q9H270 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.33□□□□□ -1.56
VPS11Q9H270 AC147055.4-201ENST00000504399 745 ntBASIC5.33□□□□□ -1.56
VPS11Q9H270 MTCO3P9-201ENST00000506989 781 ntBASIC5.33□□□□□ -1.56
VPS11Q9H270 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.33□□□□□ -1.56
VPS11Q9H270 RPL7L1P4-201ENST00000513004 707 ntBASIC5.33□□□□□ -1.56
VPS11Q9H270 HNRNPKP5-201ENST00000515300 253 ntBASIC5.33□□□□□ -1.56
VPS11Q9H270 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.33□□□□□ -1.56
VPS11Q9H270 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.33□□□□□ -1.56
VPS11Q9H270 AC079600.1-201ENST00000550326 297 ntBASIC5.33□□□□□ -1.56
VPS11Q9H270 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS11Q9H270 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.33□□□□□ -1.56
VPS11Q9H270 AP005119.2-201ENST00000579735 1105 ntBASIC5.33□□□□□ -1.56
VPS11Q9H270 RN7SL356P-201ENST00000582228 248 ntBASIC5.33□□□□□ -1.56
VPS11Q9H270 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.33□□□□□ -1.56
VPS11Q9H270 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.33□□□□□ -1.56
VPS11Q9H270 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.33□□□□□ -1.56
VPS11Q9H270 AC068790.7-201ENST00000602347 528 ntBASIC5.33□□□□□ -1.56
VPS11Q9H270 AC091488.1-201ENST00000604239 660 ntBASIC5.33□□□□□ -1.56
VPS11Q9H270 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
VPS11Q9H270 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.33□□□□□ -1.56
VPS11Q9H270 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC5.33□□□□□ -1.56
VPS11Q9H270 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS11Q9H270 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VPS11Q9H270 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
VPS11Q9H270 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VPS11Q9H270 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
VPS11Q9H270 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
VPS11Q9H270 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VPS11Q9H270 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VPS11Q9H270 MTND5P26-201ENST00000426018 1752 ntBASIC5.32□□□□□ -1.56
VPS11Q9H270 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VPS11Q9H270 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VPS11Q9H270 TMSB4XP4-201ENST00000323496 618 ntBASIC5.32□□□□□ -1.56
VPS11Q9H270 CBX3P1-201ENST00000325243 554 ntBASIC5.32□□□□□ -1.56
VPS11Q9H270 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.32□□□□□ -1.56
VPS11Q9H270 Y_RNA.38-201ENST00000362617 102 ntBASIC5.32□□□□□ -1.56
VPS11Q9H270 RNU4-12P-201ENST00000365233 139 ntBASIC5.32□□□□□ -1.56
VPS11Q9H270 TMSB4XP8-201ENST00000402089 135 ntBASIC5.32□□□□□ -1.56
VPS11Q9H270 TMSB4XP6-201ENST00000415187 135 ntBASIC5.32□□□□□ -1.56
VPS11Q9H270 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.32□□□□□ -1.56
VPS11Q9H270 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VPS11Q9H270 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC5.32□□□□□ -1.56
VPS11Q9H270 TMSB4XP1-201ENST00000424567 135 ntBASIC5.32□□□□□ -1.56
VPS11Q9H270 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC5.32□□□□□ -1.56
VPS11Q9H270 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC5.32□□□□□ -1.56
VPS11Q9H270 AL031736.2-201ENST00000426573 787 ntBASIC5.32□□□□□ -1.56
VPS11Q9H270 MTND6P12-201ENST00000428247 522 ntBASIC5.32□□□□□ -1.56
VPS11Q9H270 CNOT7P1-201ENST00000429006 852 ntBASIC5.32□□□□□ -1.56
VPS11Q9H270 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.32□□□□□ -1.56
VPS11Q9H270 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.32□□□□□ -1.56
VPS11Q9H270 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.32□□□□□ -1.56
VPS11Q9H270 BTF3P10-201ENST00000433415 495 ntBASIC5.32□□□□□ -1.56
VPS11Q9H270 GSTM5P1-201ENST00000434751 660 ntBASIC5.32□□□□□ -1.56
VPS11Q9H270 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC5.32□□□□□ -1.56
VPS11Q9H270 RPL7L1P1-201ENST00000448259 785 ntBASIC5.32□□□□□ -1.56
VPS11Q9H270 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC5.32□□□□□ -1.56
VPS11Q9H270 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.32□□□□□ -1.56
VPS11Q9H270 TMED11P-201ENST00000479478 690 ntBASIC5.32□□□□□ -1.56
VPS11Q9H270 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms