Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.36□□□□□ -1.71
CCSER1Q9C0I3 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCSER1Q9C0I3 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.36□□□□□ -1.71
CCSER1Q9C0I3 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.36□□□□□ -1.71
CCSER1Q9C0I3 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.36□□□□□ -1.71
CCSER1Q9C0I3 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.36□□□□□ -1.71
CCSER1Q9C0I3 AC025016.1-201ENST00000616746 682 ntBASIC4.36□□□□□ -1.71
CCSER1Q9C0I3 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.36□□□□□ -1.71
CCSER1Q9C0I3 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCSER1Q9C0I3 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.36□□□□□ -1.71
CCSER1Q9C0I3 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCSER1Q9C0I3 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCSER1Q9C0I3 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CCSER1Q9C0I3 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCSER1Q9C0I3 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.35□□□□□ -1.71
CCSER1Q9C0I3 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.35□□□□□ -1.71
CCSER1Q9C0I3 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCSER1Q9C0I3 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.35□□□□□ -1.71
CCSER1Q9C0I3 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCSER1Q9C0I3 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCSER1Q9C0I3 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.35□□□□□ -1.71
CCSER1Q9C0I3 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCSER1Q9C0I3 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCSER1Q9C0I3 RNU6-213P-201ENST00000384051 104 ntBASIC4.35□□□□□ -1.71
CCSER1Q9C0I3 MIR142-201ENST00000384835 87 ntBASIC4.35□□□□□ -1.71
CCSER1Q9C0I3 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CCSER1Q9C0I3 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCSER1Q9C0I3 AC234782.4-201ENST00000417646 1048 ntBASIC4.35□□□□□ -1.71
CCSER1Q9C0I3 MTCO3P4-201ENST00000419236 787 ntBASIC4.35□□□□□ -1.71
CCSER1Q9C0I3 OR5AW1P-201ENST00000426334 1006 ntBASIC4.35□□□□□ -1.71
CCSER1Q9C0I3 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.35□□□□□ -1.71
CCSER1Q9C0I3 AF228730.2-201ENST00000438784 848 ntBASIC4.35□□□□□ -1.71
CCSER1Q9C0I3 AC097499.1-201ENST00000444277 208 ntBASIC4.35□□□□□ -1.71
CCSER1Q9C0I3 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CCSER1Q9C0I3 AC084198.1-201ENST00000477747 402 ntBASIC4.35□□□□□ -1.71
CCSER1Q9C0I3 PPIAP15-201ENST00000479662 484 ntBASIC4.35□□□□□ -1.71
CCSER1Q9C0I3 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
CCSER1Q9C0I3 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.35□□□□□ -1.71
CCSER1Q9C0I3 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.35□□□□□ -1.71
CCSER1Q9C0I3 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.35□□□□□ -1.71
CCSER1Q9C0I3 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.35□□□□□ -1.71
CCSER1Q9C0I3 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCSER1Q9C0I3 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.35□□□□□ -1.71
CCSER1Q9C0I3 AL161713.1-201ENST00000555538 145 ntBASIC4.35□□□□□ -1.71
CCSER1Q9C0I3 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.35□□□□□ -1.71
CCSER1Q9C0I3 AC093227.2-201ENST00000589357 285 ntBASIC4.35□□□□□ -1.71
CCSER1Q9C0I3 AC022916.3-201ENST00000592961 742 ntBASIC4.35□□□□□ -1.71
CCSER1Q9C0I3 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.35□□□□□ -1.71
CCSER1Q9C0I3 PCNAP1-202ENST00000595299 752 ntBASIC4.35□□□□□ -1.71
CCSER1Q9C0I3 AC018618.2-201ENST00000604770 446 ntBASIC4.35□□□□□ -1.71
CCSER1Q9C0I3 AL592436.1-201ENST00000605135 558 ntBASIC4.35□□□□□ -1.71
CCSER1Q9C0I3 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.35□□□□□ -1.71
CCSER1Q9C0I3 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.35□□□□□ -1.71
CCSER1Q9C0I3 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.35□□□□□ -1.71
CCSER1Q9C0I3 MIR6500-201ENST00000622700 86 ntBASIC4.35□□□□□ -1.71
CCSER1Q9C0I3 CDRT1-208ENST00000630868 794 ntBASIC4.35□□□□□ -1.71
CCSER1Q9C0I3 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCSER1Q9C0I3 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCSER1Q9C0I3 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.35□□□□□ -1.71
CCSER1Q9C0I3 AC025125.1-201ENST00000624743 1922 ntBASIC4.34□□□□□ -1.71
CCSER1Q9C0I3 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCSER1Q9C0I3 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.34□□□□□ -1.71
CCSER1Q9C0I3 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCSER1Q9C0I3 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCSER1Q9C0I3 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.34□□□□□ -1.71
CCSER1Q9C0I3 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCSER1Q9C0I3 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCSER1Q9C0I3 Y_RNA.126-201ENST00000363382 111 ntBASIC4.34□□□□□ -1.71
CCSER1Q9C0I3 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCSER1Q9C0I3 MTND3P20-201ENST00000407663 186 ntBASIC4.34□□□□□ -1.71
CCSER1Q9C0I3 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.34□□□□□ -1.71
CCSER1Q9C0I3 OR8F1P-201ENST00000425243 930 ntBASIC4.34□□□□□ -1.71
CCSER1Q9C0I3 Z74696.2-201ENST00000436514 498 ntBASIC4.34□□□□□ -1.71
CCSER1Q9C0I3 RPL7P29-201ENST00000437151 728 ntBASIC4.34□□□□□ -1.71
CCSER1Q9C0I3 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.34□□□□□ -1.71
CCSER1Q9C0I3 AC007000.2-201ENST00000442564 487 ntBASIC4.34□□□□□ -1.71
CCSER1Q9C0I3 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.34□□□□□ -1.71
CCSER1Q9C0I3 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.34□□□□□ -1.71
CCSER1Q9C0I3 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CCSER1Q9C0I3 AP000926.1-201ENST00000479573 241 ntBASIC4.34□□□□□ -1.71
CCSER1Q9C0I3 BTF3L4P4-201ENST00000506381 449 ntBASIC4.34□□□□□ -1.71
CCSER1Q9C0I3 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCSER1Q9C0I3 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.34□□□□□ -1.71
CCSER1Q9C0I3 AC135001.1-201ENST00000544546 283 ntBASIC4.34□□□□□ -1.71
CCSER1Q9C0I3 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.34□□□□□ -1.71
CCSER1Q9C0I3 OR4U1P-201ENST00000554958 912 ntBASIC4.34□□□□□ -1.71
CCSER1Q9C0I3 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.34□□□□□ -1.71
CCSER1Q9C0I3 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.34□□□□□ -1.71
CCSER1Q9C0I3 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.34□□□□□ -1.71
CCSER1Q9C0I3 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.34□□□□□ -1.71
CCSER1Q9C0I3 AL139286.1-201ENST00000604465 483 ntBASIC4.34□□□□□ -1.71
CCSER1Q9C0I3 AC006946.3-201ENST00000609791 756 ntBASIC4.34□□□□□ -1.71
CCSER1Q9C0I3 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.34□□□□□ -1.71
CCSER1Q9C0I3 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.34□□□□□ -1.71
CCSER1Q9C0I3 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.34□□□□□ -1.71
CCSER1Q9C0I3 AC017007.4-201ENST00000503353 1352 ntBASIC4.34□□□□□ -1.71
CCSER1Q9C0I3 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.34□□□□□ -1.71
CCSER1Q9C0I3 AC090229.1-201ENST00000590983 1609 ntBASIC4.34□□□□□ -1.71
CCSER1Q9C0I3 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.34□□□□□ -1.71
CCSER1Q9C0I3 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.34□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms